We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NME4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • NME4
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:73.6 nTPM
HPA Brain:42.3 nTPM
GTEx:73.6 nTPM
FANTOM5:39.1 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:3.0 nTPM
Allen mouse:1.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB045997
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 36.9
1857 Female, age 85, left hemisphere 41.3
2290 Female, age 72, unknown 40.4
2289 Male, age 61, right hemisphere 39.4
2481 Female, age 94, left hemisphere 39.1
2846 Female, age 79, unknown 35.7
1781 Male, age 74, unknown 35.5
1854 Male, age 80, left hemisphere 33.5
2288 Male, age 75, left hemisphere 30.4
Globus pallidus, externus
nTPM: 40.7
2646 Male, age 61, right hemisphere 51.6
1996 Male, age 80, right hemisphere 45.6
2567 Female, age 72, unknown 42.5
2772 Female, age 79, unknown 33.0
2395 Male, age 75, both hemispheres 31.1
Globus pallidus, internus
nTPM: 34.6
2037 Male, age 80, right hemisphere 41.7
2566 Female, age 72, unknown 39.0
1818 Male, age 74, unknown 38.4
2483 Female, age 94, right hemisphere 36.1
2287 Male, age 75, right hemisphere 31.0
2111 Female, age 85, right hemisphere 28.1
2778 Female, age 91, both hemispheres 28.1
Nucleus accumbens
nTPM: 36.0
2698 Female, age 72, unknown 43.8
1783 Male, age 74, unknown 40.6
1806 Female, age 85, left hemisphere 39.9
2732 Male, age 80, right hemisphere 39.4
1856 Female, age 91, right hemisphere 34.2
2824 Male, age 61, right hemisphere 32.4
2286 Male, age 75, left hemisphere 31.3
2391 Female, age 94, left hemisphere 25.9
Nucleus basalis of Meynert
nTPM: 40.9
2569 Male, age 61, both hemispheres 60.7
2821 Male, age 75, both hemispheres 36.5
2484 Female, age 94, left hemisphere 35.8
2393 Male, age 80, right hemisphere 30.7
Nucleus of the diagonal band
nTPM: 39.5
2195 Female, age 85, both hemispheres 45.9
1979 Male, age 74, unknown 42.4
2775 Male, age 80, right hemisphere 37.4
2029 Male, age 61, right hemisphere 36.0
1812 Female, age 91, both hemispheres 35.5
Putamen
nTPM: 32.6
2647 Male, age 75, left hemisphere 37.9
2482 Female, age 94, left hemisphere 36.8
2489 Female, age 72, unknown 36.5
1838 Male, age 80, right hemisphere 30.5
1829 Male, age 74, unknown 29.4
2466 Female, age 79, unknown 29.1
1937 Female, age 91, right hemisphere 28.2
Septal nuclei
nTPM: 42.3
2059 Female, age 85, both hemispheres 50.2
2629 Female, age 94, right hemisphere 49.7
1960 Male, age 74, unknown 42.9
2394 Male, age 61, left hemisphere 42.0
2199 Male, age 80, right hemisphere 41.9
2009 Female, age 91, both hemispheres 36.8
2031 Female, age 72, unknown 32.6
Stria terminalis, bed nucleus
nTPM: 37.1
2201 Male, age 74, unknown 42.0
2486 Female, age 94, both hemispheres 34.7
1974 Female, age 91, both hemispheres 34.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 64.1
Samples: 246

Max nTPM: 145.6
Min nTPM: 20.2
Std nTPM: 22.6
Median nTPM: 59.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 145.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 139.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 131.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 127.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 125.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 121.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 115.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 111.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 107.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 105.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 103.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 102.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 102.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 101.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 101.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 101.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 100.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 100.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 99.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 98.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 97.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 96.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 96.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 96.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 96.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 95.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 95.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 93.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 93.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 92.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 92.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 91.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 91.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 91.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 89.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 88.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 87.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 87.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 87.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 86.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 86.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 86.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 85.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 84.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 84.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 83.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 83.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 83.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 82.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 81.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 81.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 81.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 81.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 80.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 79.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 78.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 78.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 78.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 78.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 77.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 77.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 77.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 77.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 77.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 76.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 76.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 76.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 74.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 74.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 74.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 73.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 73.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 73.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 73.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 72.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 70.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 70.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 69.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 68.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 68.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 68.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 68.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 68.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 67.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 66.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 66.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 65.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 64.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 64.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 63.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 63.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 63.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 62.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 62.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 60.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 59.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 59.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 59.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 59.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 58.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 58.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 58.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 57.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 57.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 57.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 57.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 56.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 56.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 56.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 56.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 54.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 54.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 54.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 53.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 53.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 53.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 52.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 52.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 52.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 52.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 51.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 51.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 51.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 50.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 50.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 50.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 50.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 49.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 49.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 48.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 48.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 48.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 48.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 47.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 47.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 47.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 47.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 46.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 46.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 45.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 45.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 44.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 44.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 44.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 44.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 44.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 44.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 43.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 43.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 43.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 43.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 42.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 41.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 40.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 39.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 39.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 39.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 39.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 38.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 38.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 38.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 38.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 37.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 37.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 36.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 35.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 35.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 35.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 35.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 34.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 34.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 33.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 32.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 32.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 30.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 29.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 29.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 29.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 24.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 20.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 73.6
Samples: 246

Max nTPM: 271.4
Min nTPM: 29.4
Std nTPM: 33.2
Median nTPM: 65.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 271.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 168.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 160.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 160.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 159.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 158.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 155.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 152.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 152.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 148.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 145.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 144.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 142.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 140.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 137.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 136.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 135.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 135.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 134.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 132.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 129.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 125.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 124.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 124.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 120.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 119.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 119.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 119.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 119.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 118.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 117.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 114.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 113.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 111.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 110.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 110.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 109.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 107.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 106.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 106.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 105.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 103.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 102.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 99.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 99.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 99.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 99.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 95.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 94.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 94.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 91.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 91.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 90.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 90.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 90.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 89.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 89.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 89.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 88.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 87.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 87.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 87.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 86.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 86.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 84.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 84.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 83.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 82.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 82.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 82.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 80.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 78.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 78.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 78.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 77.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 76.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 76.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 76.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 75.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 75.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 74.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 74.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 74.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 74.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 74.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 73.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 73.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 73.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 73.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 73.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 72.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 72.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 72.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 71.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 71.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 70.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 70.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 70.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 70.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 69.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 69.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 69.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 69.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 69.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 68.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 68.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 68.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 68.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 67.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 67.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 67.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 67.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 66.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 66.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 66.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 66.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 66.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 65.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 65.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 65.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 65.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 64.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 63.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 63.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 62.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 62.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 62.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 62.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 61.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 61.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 61.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 60.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 60.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 60.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 60.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 60.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 60.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 59.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 59.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 59.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 58.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 58.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 58.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 58.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 58.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 58.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 57.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 57.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 57.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 57.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 57.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 56.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 56.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 56.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 56.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 56.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 56.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 56.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 55.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 55.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 55.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 54.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 53.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 53.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 53.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 53.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 52.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 52.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 52.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 52.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 51.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 50.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 50.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 49.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 49.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 49.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 48.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 48.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 48.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 47.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 47.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 47.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 46.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 46.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 46.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 46.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 46.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 45.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 45.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 45.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 44.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 44.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 44.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 44.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 44.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 44.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 44.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 43.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 43.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 43.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 43.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 43.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 42.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 42.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 41.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 41.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 41.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 41.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 40.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 39.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 38.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 38.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 37.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 37.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 37.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 37.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 36.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 35.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 35.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 35.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 34.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 34.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 33.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 29.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 69.0
Samples: 205

Max nTPM: 145.0
Min nTPM: 27.7
Std nTPM: 24.5
Median nTPM: 62.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 145.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 141.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 125.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 125.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 124.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 123.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 122.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 119.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 118.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 117.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 117.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 117.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 115.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 115.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 114.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 114.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 112.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 111.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 109.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 109.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 109.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 107.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 106.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 105.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 103.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 102.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 100.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 98.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 98.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 97.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 96.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 95.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 95.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 93.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 92.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 92.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 92.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 91.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 91.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 90.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 90.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 89.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 89.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 88.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 88.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 86.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 85.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 84.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 84.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 84.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 83.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 83.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 82.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 82.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 81.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 81.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 81.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 80.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 78.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 78.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 78.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 78.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 77.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 77.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 76.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 76.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 75.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 75.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 75.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 75.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 73.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 73.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 73.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 72.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 72.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 71.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 71.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 70.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 69.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 69.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 69.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 68.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 67.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 67.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 67.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 67.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 66.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 65.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 65.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 65.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 65.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 64.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 63.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 63.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 62.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 62.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 62.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 61.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 61.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 61.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 61.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 61.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 61.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 61.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 60.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 60.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 60.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 60.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 60.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 60.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 59.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 59.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 59.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 59.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 59.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 58.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 58.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 58.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 58.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 57.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 57.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 57.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 56.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 56.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 56.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 56.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 55.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 55.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 55.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 55.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 54.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 54.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 53.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 53.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 53.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 53.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 52.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 52.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 49.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 49.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 49.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 48.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 47.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 47.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 47.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 47.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 46.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 46.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 46.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 46.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 46.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 46.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 46.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 45.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 45.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 45.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 45.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 45.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 45.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 45.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 45.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 44.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 44.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 44.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 44.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 43.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 43.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 42.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 42.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 41.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 41.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 40.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 40.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 40.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 39.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 39.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 39.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 38.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 38.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 38.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 37.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 37.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 36.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 35.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 30.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 29.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 28.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 27.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 39.1
FF:10164-103B2 76 years, female 39.1
Nucleus accumbens
Scaled Tags Per Million: 29.7
FF:10037-101F1 23-56 years, mixed 29.7
Putamen
Scaled Tags Per Million: 29.5
FF:10176-103C5 60 years, female 29.5
Globus pallidus
Scaled Tags Per Million: 27.7
FF:10161-103A8 76 years, female 38.2
FF:10175-103C4 60 years, female 17.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.5
Pig sample Sample description nTPM
Caudate
nTPM: 4.4
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.7
Sample A Female 3.7
Sample B Female 4.4
Sample C Male 5.6
Sample D Male 3.7
Putamen
nTPM: 3.8
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.9
Sample A Female 2.9
Sample B Female 4.0
Sample C Male 3.8
Sample D Male 4.4
Septum
nTPM: 4.5
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.5
Sample A Female 5.0
Sample B Female 5.2
Sample C Male 4.3
Sample D Male 3.5
Ventral pallidum
nTPM: 4.1
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.3
Sample A Female 4.7
Sample B Female 4.9
Sample C Male 3.6
Sample D Male 3.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.0
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.6
Sample A Male 2.6
Sample B Male 3.2
Sample C Female 2.8
Sample D Female 3.2
Septum
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.4
Sample A Male 2.4
Sample B Male 1.7
Sample C Female 1.4
Sample D Female 2.3
Ventral forebrain
nTPM: 2.2
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.8
Sample A Male 2.6
Sample B Male 1.8
Sample C Female 1.8
Sample D Female 2.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.7
68443519 Antisense, RP_050111_02_B08, Mouse strain C57BL/6J (56 days, male) 1.7
Pallidum
Expression energy: 1.3
68443519 Antisense, RP_050111_02_B08, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org