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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: High
Molecular layer - neuropil: Medium
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Medium
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:148.8 nTPM
HPA Brain:60.2 nTPM
GTEx:148.8 nTPM
FANTOM5:89.4 Scaled Tags Per Million
Pig:124.7 nTPM
Mouse:1.2 nTPM
Allen mouse:0.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019086Antibody HPA030619
Bergmann glia - cytoplasm/membrane Not detected-
Bergmann glia - nucleus Not detected-
GLUC cells - cytoplasm/membrane Not detected-
GLUC cells - nucleus Not detected-
Purkinje cells -Not detected
Purkinje cells - cytoplasm/membrane Not detected-
Purkinje cells - dendrites Not detected-
Purkinje cells - nucleus Not detected-
Cells in granular layer -High
Cells in molecular layer -Medium
Granular cells - cytoplasm/membrane Not detected-
Granular cells - nucleus High-
Molecular layer - neuropil Medium-
Molecular layer cells - cytoplasm/membrane Not detected-
Molecular layer cells - nucleus Not detected-
Processes in granular layer Not detected-
Processes in molecular layer Not detected-
Processes in white matter Not detected-
Synaptic glomeruli - capsule Not detected-
Synaptic glomeruli - core Medium-
White matter cells - cytoplasm/membrane Not detected-
White matter cells - nucleus High-



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 60.2
2101 Male, age 74, right hemisphere 111.2
1768 Female, age 72, unknown 88.6
1788 Male, age 55, unknown 63.7
2055 Female, age 91, right hemisphere 54.7
1774 Male, age 80, left hemisphere 54.0
2006 Male, age 61, right hemisphere 49.3
1769 Male, age 76, right hemisphere 37.4
2003 Female, age 85, right hemisphere 22.4
Cerebellar nuclei
nTPM: 9.4
2318 Male, age 74, left hemisphere 43.4
2783 Female, age 72, unknown 11.4
2005 Male, age 80, left hemisphere 6.7
1966 Female, age 91, left hemisphere 5.9
1879 Male, age 55, unknown 4.8
2175 Male, age 61, right hemisphere 3.4
2177 Female, age 85, both hemispheres 3.1
1871 Male, age 74, unknown 2.8
2882 Male, age 76, left hemisphere 2.8
Flocculonodular lobe
nTPM: 54.8
1792 Male, age 74, unknown 74.9
2004 Male, age 61, right hemisphere 64.4
1771 Male, age 80, left hemisphere 62.0
2176 Female, age 91, right hemisphere 55.5
1835 Female, age 85, right hemisphere 47.8
1765 Male, age 55, unknown 44.8
1767 Male, age 76, left hemisphere 34.2
Vermis
nTPM: 54.9
1928 Female, age 72, unknown 109.4
1751 Male, age 74, right hemisphere 72.6
1825 Male, age 74, unknown 60.2
2834 Male, age 80, left hemisphere 54.4
1988 Female, age 85, left hemisphere 48.7
1778 Female, age 91, left hemisphere 46.0
1770 Male, age 76, left hemisphere 39.3
1766 Male, age 55, unknown 36.5
2460 Male, age 61, both hemispheres 27.3

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.8
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 148.8
Samples: 215

Max nTPM: 279.1
Min nTPM: 34.7
Std nTPM: 47.5
Median nTPM: 150.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 279.1
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 274.5
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 270.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 262.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 255.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 249.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 246.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 236.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 232.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 226.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 225.9
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 221.8
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 219.8
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 219.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 219.5
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 217.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 214.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 210.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 209.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 209.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 208.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 208.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 206.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 205.3
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 202.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 201.7
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 200.0
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 200.0
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 199.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 197.4
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 197.4
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 197.0
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 195.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 194.2
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 194.0
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 191.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 191.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 190.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 190.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 189.8
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 189.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 188.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 187.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 185.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 184.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 183.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 182.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 182.4
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 182.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 181.7
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 180.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 180.7
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 179.5
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 178.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 178.1
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 177.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 177.2
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 176.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 176.0
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 175.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 174.7
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 173.8
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 172.5
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 172.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 172.3
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 172.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 172.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 172.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 171.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 170.9
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 169.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 168.6
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 168.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 168.2
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 167.8
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 167.7
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 166.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 166.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 166.2
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 165.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 164.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 164.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 163.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 162.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 162.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 162.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 162.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 161.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 161.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 159.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 159.5
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 159.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 159.4
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 158.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 158.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 157.5
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 157.2
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 157.2
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 157.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 156.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 156.9
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 156.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 156.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 155.0
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 154.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 154.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 152.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 150.6
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 149.5
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 149.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 148.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 147.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 146.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 145.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 145.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 145.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 144.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 143.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 143.8
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 143.8
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 143.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 143.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 142.7
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 142.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 142.4
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 142.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 141.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 140.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 139.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 139.1
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 137.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 136.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 136.7
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 136.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 135.8
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 134.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 133.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 131.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 129.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 129.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 129.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 128.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 128.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 128.3
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 127.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 126.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 126.2
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 124.5
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 124.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 123.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 122.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 122.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 121.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 120.7
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 118.9
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 117.8
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 117.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 117.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 116.8
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 116.6
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 116.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 115.7
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 115.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 115.5
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 113.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 112.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 112.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 111.3
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 110.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 109.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 108.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 108.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 107.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 106.3
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 106.2
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 106.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 104.9
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 104.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 103.4
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 102.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 102.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 100.5
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 100.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 99.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 99.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 99.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 98.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 96.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 93.3
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 93.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 93.0
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 92.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 87.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 86.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 85.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 84.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 83.9
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 83.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 82.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 79.0
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 78.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 76.4
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 70.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 69.8
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 69.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 69.1
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 64.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 61.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 49.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 49.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 43.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 41.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 36.8
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 35.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 34.7
Show allShow less
Brain - Cerebellum
Average nTPM: 120.9
Samples: 241

Max nTPM: 264.4
Min nTPM: 37.9
Std nTPM: 33.6
Median nTPM: 122.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 264.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 213.9
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 194.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 193.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 185.2
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 184.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 184.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 181.2
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 178.7
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 175.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 175.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 170.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 170.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 170.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 169.5
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 168.6
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 167.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 167.6
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 166.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 164.5
GTEX-17EVP-2926-SM-793BU 40-49 years, male 162.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 162.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 160.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 160.2
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 159.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 158.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 158.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 158.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 158.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 157.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 157.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 156.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 156.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 156.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 155.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 155.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 153.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 153.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 152.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 152.0
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 151.9
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 151.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 151.4
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 150.7
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 150.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 149.9
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 148.8
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 148.8
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 148.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 148.5
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 148.4
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 147.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 146.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 146.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 145.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 144.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 144.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 143.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 142.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 142.4
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 141.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 141.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 141.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 140.9
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 140.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 140.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 139.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 139.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 139.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 138.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 138.6
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 138.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 138.2
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 137.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 137.4
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 137.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 136.4
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 135.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 134.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 134.6
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 134.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 134.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 134.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 134.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 134.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 134.1
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 133.6
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 133.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 133.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 132.8
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 132.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 132.1
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 131.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 131.2
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 131.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 130.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 130.6
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 130.5
GTEX-14ABY-3026-SM-664NE 50-59 years, male 129.6
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 129.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 129.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 128.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 128.3
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 127.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 127.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 127.7
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 127.6
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 127.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 127.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 127.0
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 126.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 125.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 124.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 124.3
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 123.6
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 123.4
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 123.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 123.0
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 123.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 122.8
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 122.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 121.9
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 121.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 121.1
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 121.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 121.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 120.8
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 120.5
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 120.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 119.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 119.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 119.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 118.9
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 118.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 118.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 118.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 118.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 118.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 117.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 117.0
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 116.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 116.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 115.7
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 115.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 115.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 113.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 113.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 113.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 112.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 112.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 112.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 111.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 111.0
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 110.9
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 110.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 110.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 110.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 109.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 109.0
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 108.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 108.7
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 108.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 107.3
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 107.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 107.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 106.6
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 105.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 103.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 103.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 103.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 102.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 102.8
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 102.8
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 102.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 102.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 101.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 101.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 100.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 99.9
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 99.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 99.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 99.0
GTEX-17HII-2926-SM-79OMK 50-59 years, male 98.0
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 97.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 96.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 96.4
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 95.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 95.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 95.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 95.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 94.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 94.0
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 93.5
GTEX-144GL-2926-SM-5O99F 50-59 years, male 92.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 91.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 91.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 91.0
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 90.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 90.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 89.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 89.0
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 87.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 85.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 85.2
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 84.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 84.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 83.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 83.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 82.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 82.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 80.8
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 80.8
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 78.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 77.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 77.0
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 76.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 75.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 75.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 75.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 73.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 72.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 70.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 68.1
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 67.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 66.2
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 65.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 64.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 62.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 60.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 59.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 59.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 59.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 57.8
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 56.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 56.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 55.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 50.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 49.8
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 48.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 43.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 37.9
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

89.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 89.4
FF:10083-102B2 22-68 years, mixed 98.4
FF:10166-103B4 76 years, female 80.5

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 124.7
Samples: 4

Max nTPM: 144.4
Min nTPM: 114.5
Sample A Female 144.4
Sample B Female 120.4
Sample C Male 114.5
Sample D Male 119.3

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 1.2
Samples: 4

Max nTPM: 2.1
Min nTPM: 0.4
Sample A Male 1.0
Sample B Male 0.4
Sample C Female 2.1
Sample D Female 1.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.1
73592526 Antisense, RP_051017_01_E02, Mouse strain C57BL/6J (56 days, male) 0.1
69012741 Antisense, RP_050309_01_D06, Mouse strain C57BL/6J (56 days, male) 0.0

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