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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:96.2 nTPM
HPA Brain:113.3 nTPM
GTEx:96.2 nTPM
FANTOM5:106.6 Scaled Tags Per Million
Pig:89.7 nTPM
Mouse:90.3 nTPM
Allen mouse:2.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048315
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 92.5
2846 Female, age 79, unknown 107.9
1781 Male, age 74, unknown 107.7
2290 Female, age 72, unknown 96.9
2289 Male, age 61, right hemisphere 93.7
2288 Male, age 75, left hemisphere 90.5
1854 Male, age 80, left hemisphere 85.2
1857 Female, age 85, left hemisphere 83.4
2481 Female, age 94, left hemisphere 75.1
Globus pallidus, externus
nTPM: 92.9
2567 Female, age 72, unknown 106.0
2646 Male, age 61, right hemisphere 105.4
2772 Female, age 79, unknown 90.3
1996 Male, age 80, right hemisphere 82.2
2395 Male, age 75, both hemispheres 80.7
Globus pallidus, internus
nTPM: 85.9
2566 Female, age 72, unknown 100.1
2483 Female, age 94, right hemisphere 91.2
2111 Female, age 85, right hemisphere 86.6
2287 Male, age 75, right hemisphere 86.6
2778 Female, age 91, both hemispheres 85.7
1818 Male, age 74, unknown 78.3
2037 Male, age 80, right hemisphere 72.7
Nucleus accumbens
nTPM: 91.3
1783 Male, age 74, unknown 112.8
2698 Female, age 72, unknown 105.6
2732 Male, age 80, right hemisphere 104.4
1806 Female, age 85, left hemisphere 91.7
1856 Female, age 91, right hemisphere 91.0
2824 Male, age 61, right hemisphere 78.6
2286 Male, age 75, left hemisphere 75.0
2391 Female, age 94, left hemisphere 71.0
Nucleus basalis of Meynert
nTPM: 93.4
2569 Male, age 61, both hemispheres 118.3
2821 Male, age 75, both hemispheres 91.4
2484 Female, age 94, left hemisphere 90.7
2393 Male, age 80, right hemisphere 73.1
Nucleus of the diagonal band
nTPM: 113.3
2775 Male, age 80, right hemisphere 124.8
2195 Female, age 85, both hemispheres 120.8
2029 Male, age 61, right hemisphere 112.7
1812 Female, age 91, both hemispheres 110.8
1979 Male, age 74, unknown 97.3
Putamen
nTPM: 94.9
2647 Male, age 75, left hemisphere 120.7
1829 Male, age 74, unknown 104.8
2489 Female, age 72, unknown 99.2
2466 Female, age 79, unknown 98.8
1838 Male, age 80, right hemisphere 83.3
1937 Female, age 91, right hemisphere 81.9
2482 Female, age 94, left hemisphere 75.6
Septal nuclei
nTPM: 113.2
1960 Male, age 74, unknown 144.9
2059 Female, age 85, both hemispheres 129.7
2031 Female, age 72, unknown 128.6
2629 Female, age 94, right hemisphere 116.1
2009 Female, age 91, both hemispheres 96.5
2394 Male, age 61, left hemisphere 95.4
2199 Male, age 80, right hemisphere 80.9
Stria terminalis, bed nucleus
nTPM: 101.9
1974 Female, age 91, both hemispheres 115.8
2486 Female, age 94, both hemispheres 105.1
2201 Male, age 74, unknown 84.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 77.8
Samples: 246

Max nTPM: 147.6
Min nTPM: 41.6
Std nTPM: 16.1
Median nTPM: 75.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 147.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 138.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 126.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 125.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 122.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 115.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 115.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 111.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 110.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 110.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 110.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 109.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 106.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 106.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 103.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 103.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 102.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 101.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 101.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 101.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 100.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 100.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 99.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 97.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 97.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 97.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 97.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 96.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 96.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 96.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 95.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 95.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 95.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 95.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 95.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 95.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 94.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 94.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 94.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 94.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 94.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 93.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 93.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 91.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 91.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 91.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 91.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 91.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 90.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 88.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 88.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 88.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 87.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 87.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 87.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 87.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 87.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 87.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 86.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 86.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 86.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 85.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 85.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 84.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 84.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 84.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 83.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 83.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 83.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 83.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 82.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 82.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 82.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 81.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 81.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 81.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 81.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 80.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 80.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 80.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 80.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 80.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 80.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 80.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 79.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 79.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 79.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 78.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 78.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 78.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 78.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 78.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 77.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 77.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 77.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 77.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 77.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 77.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 77.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 76.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 76.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 76.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 76.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 76.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 76.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 75.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 75.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 75.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 75.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 75.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 74.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 74.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 73.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 73.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 73.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 73.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 73.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 72.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 72.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 72.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 72.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 72.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 72.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 72.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 72.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 72.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 72.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 71.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 71.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 71.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 71.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 70.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 70.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 70.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 70.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 70.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 70.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 69.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 69.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 69.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 69.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 69.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 69.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 69.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 69.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 69.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 69.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 69.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 68.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 68.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 68.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 67.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 67.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 67.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 67.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 67.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 67.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 66.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 66.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 66.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 66.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 66.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 66.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 65.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 65.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 65.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 65.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 64.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 64.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 64.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 64.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 64.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 64.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 63.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 63.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 63.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 62.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 61.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 61.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 61.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 61.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 61.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 60.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 60.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 60.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 59.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 59.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 59.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 59.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 59.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 59.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 58.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 57.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 55.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 54.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 48.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 45.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 96.2
Samples: 246

Max nTPM: 154.0
Min nTPM: 49.8
Std nTPM: 21.0
Median nTPM: 96.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 154.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 152.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 150.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 146.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 145.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 141.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 139.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 137.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 133.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 131.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 131.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 130.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 129.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 129.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 129.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 128.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 128.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 127.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 127.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 125.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 124.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 124.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 123.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 123.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 122.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 121.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 121.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 121.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 120.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 120.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 120.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 120.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 119.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 119.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 119.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 118.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 117.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 117.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 117.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 117.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 117.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 116.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 116.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 116.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 115.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 115.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 114.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 114.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 113.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 113.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 113.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 112.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 112.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 112.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 112.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 112.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 111.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 111.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 111.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 110.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 110.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 110.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 110.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 110.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 110.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 110.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 109.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 109.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 108.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 108.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 108.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 108.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 108.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 107.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 107.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 107.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 107.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 107.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 106.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 105.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 104.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 104.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 104.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 104.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 103.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 103.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 103.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 103.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 103.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 103.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 102.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 102.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 102.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 101.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 101.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 101.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 101.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 100.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 100.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 100.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 100.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 100.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 100.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 100.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 100.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 99.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 99.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 99.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 99.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 99.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 99.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 98.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 98.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 98.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 98.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 98.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 97.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 97.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 97.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 97.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 97.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 96.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 96.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 95.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 95.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 95.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 95.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 95.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 95.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 95.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 95.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 94.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 94.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 93.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 92.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 92.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 92.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 91.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 91.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 91.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 90.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 90.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 90.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 90.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 89.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 89.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 89.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 89.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 89.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 89.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 89.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 88.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 88.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 88.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 88.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 88.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 87.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 87.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 87.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 87.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 86.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 86.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 86.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 86.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 86.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 86.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 86.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 85.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 85.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 85.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 85.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 84.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 84.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 83.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 83.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 83.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 82.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 82.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 82.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 81.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 81.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 81.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 81.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 81.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 80.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 80.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 80.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 79.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 79.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 79.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 78.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 78.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 78.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 78.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 77.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 77.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 77.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 76.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 76.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 76.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 74.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 74.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 74.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 74.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 74.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 73.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 73.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 73.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 73.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 72.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 72.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 70.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 70.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 70.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 69.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 69.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 68.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 67.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 67.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 67.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 67.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 67.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 66.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 66.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 65.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 64.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 63.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 62.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 61.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 58.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 57.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 57.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 56.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 56.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 55.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 54.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 53.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 53.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 50.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 49.8
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Brain - Putamen (basal ganglia)
Average nTPM: 82.2
Samples: 205

Max nTPM: 141.7
Min nTPM: 44.9
Std nTPM: 16.2
Median nTPM: 81.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 141.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 126.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 126.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 117.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 117.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 116.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 114.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 114.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 114.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 113.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 112.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 108.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 108.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 104.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 103.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 103.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 103.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 103.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 101.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 101.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 101.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 100.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 100.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 100.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 100.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 99.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 98.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 98.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 98.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 98.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 98.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 98.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 97.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 97.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 97.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 96.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 95.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 95.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 95.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 94.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 94.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 94.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 93.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 93.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 93.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 92.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 92.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 92.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 92.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 92.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 92.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 91.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 91.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 91.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 90.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 90.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 90.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 90.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 89.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 89.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 89.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 88.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 88.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 88.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 88.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 87.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 87.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 87.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 87.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 87.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 87.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 86.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 86.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 86.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 86.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 86.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 86.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 85.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 85.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 85.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 84.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 84.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 84.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 84.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 84.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 83.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 83.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 83.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 83.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 83.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 82.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 82.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 81.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 81.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 81.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 80.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 80.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 79.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 79.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 79.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 79.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 78.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 78.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 78.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 78.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 78.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 77.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 77.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 77.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 76.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 76.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 76.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 76.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 76.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 76.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 76.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 76.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 76.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 76.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 75.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 75.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 75.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 74.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 74.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 74.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 74.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 74.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 73.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 73.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 72.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 72.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 72.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 72.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 72.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 72.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 71.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 71.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 71.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 71.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 70.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 70.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 70.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 70.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 70.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 70.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 70.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 69.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 68.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 68.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 68.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 67.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 67.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 67.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 67.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 67.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 67.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 67.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 67.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 66.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 66.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 66.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 65.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 64.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 63.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 63.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 63.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 63.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 62.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 62.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 62.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 61.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 61.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 60.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 60.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 59.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 58.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 56.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 56.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 55.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 51.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 51.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 50.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 47.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 45.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 104.6
FF:10164-103B2 76 years, female 104.6
Nucleus accumbens
Scaled Tags Per Million: 106.6
FF:10037-101F1 23-56 years, mixed 106.6
Putamen
Scaled Tags Per Million: 91.8
FF:10176-103C5 60 years, female 91.8
Globus pallidus
Scaled Tags Per Million: 77.9
FF:10161-103A8 76 years, female 86.8
FF:10175-103C4 60 years, female 69.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.7
Pig sample Sample description nTPM
Caudate
nTPM: 85.9
Samples: 4

Max nTPM: 105.6
Min nTPM: 72.2
Sample A Female 75.9
Sample B Female 89.9
Sample C Male 105.6
Sample D Male 72.2
Putamen
nTPM: 81.0
Samples: 4

Max nTPM: 95.4
Min nTPM: 69.6
Sample A Female 69.6
Sample B Female 73.8
Sample C Male 85.2
Sample D Male 95.4
Septum
nTPM: 78.0
Samples: 4

Max nTPM: 93.0
Min nTPM: 64.9
Sample A Female 93.0
Sample B Female 86.5
Sample C Male 67.4
Sample D Male 64.9
Ventral pallidum
nTPM: 89.7
Samples: 4

Max nTPM: 99.9
Min nTPM: 73.2
Sample A Female 73.2
Sample B Female 96.0
Sample C Male 99.9
Sample D Male 89.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 81.0
Samples: 4

Max nTPM: 86.3
Min nTPM: 72.8
Sample A Male 72.8
Sample B Male 80.3
Sample C Female 84.5
Sample D Female 86.3
Septum
nTPM: 68.9
Samples: 4

Max nTPM: 74.8
Min nTPM: 63.4
Sample A Male 74.8
Sample B Male 67.0
Sample C Female 70.5
Sample D Female 63.4
Ventral forebrain
nTPM: 90.3
Samples: 4

Max nTPM: 105.8
Min nTPM: 82.5
Sample A Male 84.4
Sample B Male 82.5
Sample C Female 105.8
Sample D Female 88.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.7
71488768 Antisense, RP_050825_02_D12, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 2.0
71488768 Antisense, RP_050825_02_D12, Mouse strain C57BL/6J (56 days, male) 2.0

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