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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:75.8 nTPM
HPA Brain:74.4 nTPM
GTEx:75.8 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Pig:36.3 nTPM
Mouse:79.9 nTPM
Allen mouse:5.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056597
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 65.1
1781 Male, age 74, unknown 71.2
2846 Female, age 79, unknown 71.2
2290 Female, age 72, unknown 67.6
1857 Female, age 85, left hemisphere 66.6
1854 Male, age 80, left hemisphere 62.0
2288 Male, age 75, left hemisphere 61.9
2481 Female, age 94, left hemisphere 60.5
2289 Male, age 61, right hemisphere 60.2
Globus pallidus, externus
nTPM: 67.8
2646 Male, age 61, right hemisphere 75.6
2772 Female, age 79, unknown 68.3
1996 Male, age 80, right hemisphere 67.6
2395 Male, age 75, both hemispheres 64.6
2567 Female, age 72, unknown 62.8
Globus pallidus, internus
nTPM: 63.3
2483 Female, age 94, right hemisphere 75.8
1818 Male, age 74, unknown 64.6
2287 Male, age 75, right hemisphere 63.5
2778 Female, age 91, both hemispheres 61.7
2566 Female, age 72, unknown 60.5
2111 Female, age 85, right hemisphere 58.6
2037 Male, age 80, right hemisphere 58.3
Nucleus accumbens
nTPM: 65.9
1783 Male, age 74, unknown 78.4
2824 Male, age 61, right hemisphere 77.2
1856 Female, age 91, right hemisphere 75.5
1806 Female, age 85, left hemisphere 67.4
2698 Female, age 72, unknown 63.1
2286 Male, age 75, left hemisphere 60.0
2732 Male, age 80, right hemisphere 55.4
2391 Female, age 94, left hemisphere 50.3
Nucleus basalis of Meynert
nTPM: 65.6
2569 Male, age 61, both hemispheres 78.5
2484 Female, age 94, left hemisphere 63.3
2821 Male, age 75, both hemispheres 62.2
2393 Male, age 80, right hemisphere 58.2
Nucleus of the diagonal band
nTPM: 74.4
2029 Male, age 61, right hemisphere 83.7
1812 Female, age 91, both hemispheres 78.5
2775 Male, age 80, right hemisphere 76.4
1979 Male, age 74, unknown 67.3
2195 Female, age 85, both hemispheres 66.1
Putamen
nTPM: 68.0
2647 Male, age 75, left hemisphere 78.5
1838 Male, age 80, right hemisphere 70.1
2466 Female, age 79, unknown 69.6
1937 Female, age 91, right hemisphere 69.0
1829 Male, age 74, unknown 65.7
2489 Female, age 72, unknown 62.8
2482 Female, age 94, left hemisphere 60.7
Septal nuclei
nTPM: 67.7
1960 Male, age 74, unknown 79.1
2031 Female, age 72, unknown 78.4
2394 Male, age 61, left hemisphere 67.2
2009 Female, age 91, both hemispheres 65.8
2059 Female, age 85, both hemispheres 65.5
2629 Female, age 94, right hemisphere 60.8
2199 Male, age 80, right hemisphere 57.3
Stria terminalis, bed nucleus
nTPM: 67.9
1974 Female, age 91, both hemispheres 73.7
2486 Female, age 94, both hemispheres 69.1
2201 Male, age 74, unknown 60.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 66.2
Samples: 246

Max nTPM: 96.8
Min nTPM: 37.0
Std nTPM: 10.9
Median nTPM: 66.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 91.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 91.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 90.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 88.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 88.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 87.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 86.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 86.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 86.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 85.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 85.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 83.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 83.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 83.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 83.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 82.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 82.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 82.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 81.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 81.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 80.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 80.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 79.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 78.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 78.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 78.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 78.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 78.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 77.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 77.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 77.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 77.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 77.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 76.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 76.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 76.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 76.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 76.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 76.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 75.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 75.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 75.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 75.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 75.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 74.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 74.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 74.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 74.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 74.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 73.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 73.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 73.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 73.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 73.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 73.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 73.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 73.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 73.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 73.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 72.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 72.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 72.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 72.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 71.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 71.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 71.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 71.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 71.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 71.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 71.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 71.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 71.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 70.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 70.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 69.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 69.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 69.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 69.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 69.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 68.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 68.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 68.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 68.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 68.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 68.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 68.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 67.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 67.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 67.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 67.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 67.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 67.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 67.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 67.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 67.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 67.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 67.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 67.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 66.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 66.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 66.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 66.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 66.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 66.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 65.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 65.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 65.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 65.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 65.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 65.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 65.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 65.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 64.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 64.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 64.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 64.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 64.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 64.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 64.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 64.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 63.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 63.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 63.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 63.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 63.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 63.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 63.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 62.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 62.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 62.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 62.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 61.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 61.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 61.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 61.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 60.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 60.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 60.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 59.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 59.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 59.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 59.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 59.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 59.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 58.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 58.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 58.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 57.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 57.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 57.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 57.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 56.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 56.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 56.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 56.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 55.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 54.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 54.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 53.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 52.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 52.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 52.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 51.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 50.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 50.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 47.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 47.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 46.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 46.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 43.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 42.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 42.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 41.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 75.8
Samples: 246

Max nTPM: 118.6
Min nTPM: 29.1
Std nTPM: 14.4
Median nTPM: 74.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 118.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 118.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 113.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 108.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 104.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 104.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 103.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 102.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 101.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 100.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 100.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 100.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 99.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 99.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 99.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 99.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 99.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 99.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 98.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 98.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 98.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 97.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 97.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 96.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 96.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 95.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 95.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 94.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 94.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 94.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 92.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 92.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 92.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 92.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 92.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 91.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 91.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 91.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 90.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 90.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 89.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 89.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 88.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 87.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 87.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 87.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 87.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 87.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 87.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 87.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 87.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 87.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 86.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 86.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 86.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 85.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 85.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 85.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 85.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 84.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 84.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 83.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 83.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 83.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 83.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 83.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 83.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 82.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 82.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 82.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 82.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 82.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 82.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 82.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 82.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 82.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 82.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 81.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 81.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 81.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 81.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 81.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 81.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 81.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 81.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 81.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 80.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 80.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 80.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 80.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 80.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 80.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 79.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 79.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 78.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 78.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 78.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 78.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 78.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 78.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 78.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 78.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 77.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 77.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 77.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 76.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 76.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 76.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 76.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 76.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 76.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 75.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 75.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 75.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 75.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 75.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 75.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 75.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 75.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 75.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 75.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 74.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 74.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 74.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 74.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 74.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 74.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 73.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 73.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 73.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 73.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 73.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 73.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 73.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 72.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 72.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 72.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 72.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 72.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 72.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 71.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 71.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 71.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 71.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 71.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 71.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 70.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 70.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 70.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 70.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 70.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 70.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 69.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 69.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 69.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 69.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 68.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 68.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 68.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 68.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 68.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 68.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 68.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 67.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 67.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 67.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 67.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 67.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 67.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 66.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 66.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 66.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 66.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 66.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 66.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 66.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 66.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 66.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 66.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 65.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 65.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 65.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 65.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 65.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 65.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 65.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 65.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 64.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 64.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 64.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 64.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 64.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 63.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 63.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 63.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 63.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 63.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 62.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 62.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 62.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 62.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 62.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 60.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 60.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 60.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 60.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 60.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 60.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 59.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 59.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 58.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 58.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 58.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 58.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 58.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 58.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 57.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 57.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 56.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 55.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 55.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 54.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 51.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 50.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 49.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 46.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 46.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 45.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 43.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 41.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 37.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 29.1
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Brain - Putamen (basal ganglia)
Average nTPM: 71.7
Samples: 205

Max nTPM: 90.9
Min nTPM: 45.5
Std nTPM: 9.6
Median nTPM: 72.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 90.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 90.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 89.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 89.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 88.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 88.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 88.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 88.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 88.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 88.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 87.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 87.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 87.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 86.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 86.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 86.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 86.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 85.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 85.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 85.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 85.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 84.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 83.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 83.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 83.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 83.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 82.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 82.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 82.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 81.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 81.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 81.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 81.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 81.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 80.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 80.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 80.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 80.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 80.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 79.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 79.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 79.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 79.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 79.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 79.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 78.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 78.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 78.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 77.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 77.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 77.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 77.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 77.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 77.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 77.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 77.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 76.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 76.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 76.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 76.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 76.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 76.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 76.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 76.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 76.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 76.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 75.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 75.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 75.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 75.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 75.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 75.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 75.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 75.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 75.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 74.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 74.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 74.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 74.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 74.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 74.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 74.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 74.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 74.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 74.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 73.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 73.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 73.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 73.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 73.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 73.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 73.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 72.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 72.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 72.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 72.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 72.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 72.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 72.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 71.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 71.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 71.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 71.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 71.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 70.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 70.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 70.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 70.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 70.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 70.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 70.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 69.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 69.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 69.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 69.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 69.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 69.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 69.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 68.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 68.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 68.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 68.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 67.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 67.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 67.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 67.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 67.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 67.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 66.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 66.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 66.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 66.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 65.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 65.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 65.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 65.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 64.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 64.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 64.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 64.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 64.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 64.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 64.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 64.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 64.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 63.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 63.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 62.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 62.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 62.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 62.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 62.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 62.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 62.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 61.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 61.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 61.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 60.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 60.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 59.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 59.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 59.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 59.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 59.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 58.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 58.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 57.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 57.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 57.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 56.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 56.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 56.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 55.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 54.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 53.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 52.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 52.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 50.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 45.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 57.6
FF:10164-103B2 76 years, female 57.6
Nucleus accumbens
Scaled Tags Per Million: 52.4
FF:10037-101F1 23-56 years, mixed 52.4
Putamen
Scaled Tags Per Million: 65.4
FF:10176-103C5 60 years, female 65.4
Globus pallidus
Scaled Tags Per Million: 35.5
FF:10161-103A8 76 years, female 38.9
FF:10175-103C4 60 years, female 32.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.3
Pig sample Sample description nTPM
Caudate
nTPM: 31.5
Samples: 4

Max nTPM: 35.2
Min nTPM: 25.6
Sample A Female 25.6
Sample B Female 35.2
Sample C Male 33.0
Sample D Male 32.3
Putamen
nTPM: 31.5
Samples: 4

Max nTPM: 38.3
Min nTPM: 27.0
Sample A Female 27.2
Sample B Female 27.0
Sample C Male 38.3
Sample D Male 33.4
Septum
nTPM: 36.3
Samples: 4

Max nTPM: 50.5
Min nTPM: 29.3
Sample A Female 32.9
Sample B Female 32.4
Sample C Male 50.5
Sample D Male 29.3
Ventral pallidum
nTPM: 34.4
Samples: 4

Max nTPM: 48.3
Min nTPM: 29.7
Sample A Female 29.7
Sample B Female 29.8
Sample C Male 48.3
Sample D Male 29.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 73.6
Samples: 4

Max nTPM: 78.3
Min nTPM: 68.7
Sample A Male 75.0
Sample B Male 72.4
Sample C Female 68.7
Sample D Female 78.3
Septum
nTPM: 75.1
Samples: 4

Max nTPM: 84.8
Min nTPM: 68.4
Sample A Male 71.0
Sample B Male 76.2
Sample C Female 84.8
Sample D Female 68.4
Ventral forebrain
nTPM: 80.0
Samples: 4

Max nTPM: 87.4
Min nTPM: 72.1
Sample A Male 75.3
Sample B Male 72.1
Sample C Female 85.0
Sample D Female 87.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.0
76098296 Antisense, RP_060626_01_E07, Mouse strain C57BL/6J (56 days, male) 5.0
Pallidum
Expression energy: 4.3
76098296 Antisense, RP_060626_01_E07, Mouse strain C57BL/6J (56 days, male) 4.3

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