PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:88.4 nTPM
FANTOM5:51.4 Scaled Tags Per Million
Pig:52.2 nTPM
Mouse:42.9 nTPM
Allen mouse:4.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 88.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 66.3
1984 Male, age 76, both hemispheres 73.0
2301 Female, age 85, both hemispheres 65.4
2188 Female, age 91, both hemispheres 63.8
2090 Male, age 80, both hemispheres 63.1
Area postrema
nTPM: 64.4
2799 Male, age 61, both hemispheres 72.0
2054 Male, age 76, both hemispheres 64.1
2306 Male, age 80, both hemispheres 57.1
Dorsal cochlear nucleus
nTPM: 66.8
2802 Male, age 74, right hemisphere 75.5
2058 Male, age 76, both hemispheres 68.9
2187 Female, age 91, both hemispheres 65.5
2370 Male, age 61, both hemispheres 64.0
2378 Male, age 80, both hemispheres 60.2
Dorsal medullary reticular nucleus
nTPM: 71.1
2040 Female, age 85, both hemispheres 83.6
2373 Male, age 61, both hemispheres 65.4
2088 Male, age 76, both hemispheres 64.3
Dorsal motor vagal complex
nTPM: 72.7
2844 Male, age 55, unknown 86.4
2133 Female, age 91, both hemispheres 83.4
2797 Male, age 61, both hemispheres 82.7
2000 Male, age 74, unknown 75.8
2643 Male, age 74, both hemispheres 75.0
2813 Female, age 72, unknown 61.4
2185 Male, age 76, both hemispheres 58.7
2807 Female, age 85, both hemispheres 57.7
Dorsal tegmental nucleus
nTPM: 63.7
2083 Male, age 80, both hemispheres 71.7
2358 Male, age 61, both hemispheres 66.7
1936 Male, age 76, left hemisphere 61.5
2326 Male, age 74, both hemispheres 54.6
Dorsolateral tegmental area
nTPM: 62.7
2654 Male, age 80, both hemispheres 68.3
2751 Female, age 85, both hemispheres 67.8
2141 Male, age 76, both hemispheres 67.0
2337 Male, age 61, both hemispheres 58.4
2360 Male, age 74, both hemispheres 52.0
Gigantocellular reticular nuclei, medullary
nTPM: 67.7
2462 Male, age 74, both hemispheres 81.6
2387 Female, age 91, both hemispheres 75.7
2310 Male, age 80, both hemispheres 67.8
1876 Female, age 85, both hemispheres 67.4
2314 Male, age 61, both hemispheres 60.4
2022 Male, age 76, right hemisphere 53.6
Gigantocellular reticular nuclei, pars
nTPM: 69.6
2168 Male, age 76, both hemispheres 86.5
2084 Female, age 85, both hemispheres 75.1
2336 Male, age 61, both hemispheres 63.9
2330 Male, age 80, both hemispheres 61.4
2706 Male, age 80, both hemispheres 61.0
Inferior olive
nTPM: 66.7
2563 Male, age 74, both hemispheres 73.3
2085 Female, age 85, both hemispheres 72.5
2379 Male, age 80, both hemispheres 65.0
2628 Female, age 91, both hemispheres 64.2
2178 Male, age 61, both hemispheres 58.5
Kolliker-Fuse nucleus
nTPM: 63.7
2163 Male, age 80, both hemispheres 69.4
2793 Female, age 91, left hemisphere 65.1
2315 Male, age 76, right hemisphere 56.7
Lateral lemniscal nuclei
nTPM: 73.9
2036 Male, age 80, both hemispheres 82.7
2169 Male, age 76, both hemispheres 78.8
2453 Male, age 74, right hemisphere 74.9
2746 Female, age 85, left hemisphere 70.1
2320 Female, age 91, left hemisphere 63.0
Lateral medullary reticular nucleus
nTPM: 68.5
2044 Male, age 76, both hemispheres 80.6
2804 Female, age 91, both hemispheres 75.4
2852 Male, age 80, both hemispheres 69.6
2190 Female, age 85, both hemispheres 63.6
2374 Male, age 61, both hemispheres 61.4
2305 Male, age 74, both hemispheres 60.3
Lateral parabrachial nucleus
nTPM: 66.4
2790 Male, age 61, both hemispheres 78.9
2139 Female, age 85, right hemisphere 73.6
2013 Male, age 80, both hemispheres 61.0
2792 Male, age 76, both hemispheres 52.2
Lateral vestibular nucleus
nTPM: 67.7
2184 Male, age 76, both hemispheres 73.5
2311 Male, age 80, both hemispheres 62.0
Locus coeruleus
nTPM: 88.4
2014 Male, age 55, unknown 103.6
1980 Male, age 76, both hemispheres 93.5
2317 Female, age 72, unknown 93.5
2123 Female, age 91, both hemispheres 93.0
2720 Male, age 74, both hemispheres 91.0
2162 Male, age 80, both hemispheres 80.4
2788 Male, age 74, unknown 64.0
Medial olivary nucleus
nTPM: 58.2
2138 Female, age 91, both hemispheres 64.1
1962 Male, age 76, both hemispheres 58.4
2851 Male, age 80, both hemispheres 55.8
1943 Male, age 61, both hemispheres 54.3
Medial parabrachial nucleus
nTPM: 66.4
2463 Female, age 85, right hemisphere 77.1
2170 Female, age 91, both hemispheres 69.3
2156 Male, age 61, both hemispheres 66.6
2854 Male, age 80, both hemispheres 61.0
2786 Male, age 76, both hemispheres 58.0
Medial periolivary nuclei
nTPM: 73.9
2063 Male, age 76, both hemispheres 95.9
2171 Female, age 85, both hemispheres 85.3
2791 Male, age 74, right hemisphere 69.6
2458 Female, age 91, both hemispheres 60.4
2081 Male, age 80, both hemispheres 58.4
Medial vestibular nucleus
nTPM: 71.8
2134 Male, age 76, both hemispheres 82.8
2093 Male, age 80, both hemispheres 70.1
2624 Male, age 61, both hemispheres 70.0
2743 Female, age 85, both hemispheres 69.9
2803 Female, age 91, both hemispheres 69.0
2801 Male, age 74, both hemispheres 68.7
Motor facial nucleus
nTPM: 75.8
2062 Male, age 76, both hemispheres 101.2
2795 Female, age 91, both hemispheres 77.4
2126 Male, age 61, both hemispheres 72.8
2365 Male, age 74, right hemisphere 69.5
2697 Female, age 85, both hemispheres 67.6
2327 Male, age 80, both hemispheres 66.5
Motor hypoglossal nucleus
nTPM: 73.0
2125 Female, age 91, both hemispheres 80.6
2132 Female, age 85, both hemispheres 77.3
2277 Male, age 76, both hemispheres 71.9
2182 Male, age 80, both hemispheres 69.6
2461 Male, age 61, both hemispheres 65.9
Motor trigeminal nucleus
nTPM: 66.7
2560 Male, age 74, both hemispheres 79.5
2079 Male, age 80, both hemispheres 71.4
2321 Female, age 91, both hemispheres 63.0
2309 Male, age 76, both hemispheres 59.9
2335 Male, age 61, both hemispheres 59.6
Nuclei of the trapezoid body
nTPM: 80.9
2735 Female, age 85, both hemispheres 93.9
1983 Male, age 76, both hemispheres 89.8
2159 Male, age 61, both hemispheres 79.9
2166 Male, age 80, both hemispheres 71.9
2368 Female, age 91, both hemispheres 69.0
Nucleus ambiguus
nTPM: 86.3
2096 Female, age 85, both hemispheres 100.2
2071 Male, age 76, both hemispheres 72.5
Nucleus cuneatus
nTPM: 68.1
2564 Male, age 74, both hemispheres 77.2
2562 Male, age 61, both hemispheres 76.0
2805 Female, age 91, both hemispheres 75.8
2131 Male, age 76, both hemispheres 72.7
2100 Male, age 76, both hemispheres 66.4
2376 Male, age 61, both hemispheres 65.0
2380 Male, age 80, both hemispheres 61.5
2808 Female, age 85, both hemispheres 59.6
2381 Male, age 80, both hemispheres 58.4
Nucleus gracilis
nTPM: 58.6
2627 Male, age 74, both hemispheres 64.5
2382 Male, age 80, both hemispheres 58.1
2299 Female, age 85, both hemispheres 53.1
Nucleus raphe magnus
nTPM: 76.0
2172 Female, age 85, both hemispheres 88.3
2160 Male, age 61, both hemispheres 85.0
2051 Male, age 76, both hemispheres 81.5
2455 Male, age 74, both hemispheres 71.6
2328 Male, age 80, both hemispheres 67.3
2459 Female, age 91, both hemispheres 62.3
Nucleus raphe obscurus
nTPM: 65.3
2845 Female, age 85, midline 71.9
2800 Male, age 61, midline 69.1
2142 Male, age 76, midline 54.9
Nucleus raphe pallidus
nTPM: 63.7
2183 Male, age 80, midline 68.2
1924 Male, age 61, midline 62.2
2145 Male, age 76, midline 60.9
Nucleus tractus solitarii
nTPM: 60.7
2656 Male, age 76, both hemispheres 73.8
2307 Male, age 80, both hemispheres 62.6
2191 Female, age 85, both hemispheres 54.3
2144 Female, age 91, right hemisphere 52.0
Paramedian reticular nucleus
nTPM: 73.1
2050 Female, age 85, both hemispheres 83.8
2057 Male, age 80, both hemispheres 79.3
2313 Male, age 61, both hemispheres 73.2
2052 Male, age 76, both hemispheres 56.2
Parvicellular reticular nuclei
nTPM: 71.9
2558 Male, age 74, both hemispheres 77.8
2119 Male, age 80, both hemispheres 71.7
2095 Male, age 76, both hemispheres 66.2
Parvicellular reticular nuclei, medullary
nTPM: 70.5
2091 Female, age 85, both hemispheres 78.4
2189 Female, age 91, both hemispheres 69.3
2181 Male, age 80, left hemisphere 63.9
Pedunculopontine tegmental nucleus
nTPM: 63.9
1921 Female, age 85, both hemispheres 70.5
2334 Male, age 80, both hemispheres 67.6
2338 Male, age 61, both hemispheres 53.4
Peritrigeminal nucleus
nTPM: 72.8
2067 Female, age 85, both hemispheres 77.2
2136 Male, age 76, both hemispheres 74.5
2179 Male, age 61, both hemispheres 66.7
Pontine nuclei
nTPM: 77.0
2787 Female, age 85, both hemispheres 95.7
1863 Male, age 55, unknown 88.5
1968 Male, age 76, left hemisphere 86.2
2109 Female, age 72, unknown 84.4
2727 Male, age 61, right hemisphere 75.7
2454 Male, age 74, left hemisphere 66.1
2115 Male, age 80, left hemisphere 59.9
2319 Female, age 91, both hemispheres 59.3
Pontine raphe nucleus
nTPM: 79.2
2122 Female, age 85, midline 80.8
2853 Male, age 76, midline 77.7
Posteroventral cochlear nucleus
nTPM: 61.8
2752 Female, age 85, both hemispheres 73.0
2371 Male, age 61, both hemispheres 65.6
2070 Male, age 76, both hemispheres 63.4
2135 Female, age 91, both hemispheres 56.4
2341 Male, age 80, both hemispheres 50.5
Prepositus hypoglossal nucleus
nTPM: 71.1
2855 Female, age 85, right hemisphere 77.6
2086 Male, age 80, both hemispheres 64.6
Principal sensory trigeminal nucleus
nTPM: 70.1
2158 Male, age 61, both hemispheres 82.9
2008 Male, age 80, left hemisphere 70.3
2324 Male, age 76, both hemispheres 70.2
2367 Female, age 91, left hemisphere 57.2
Reticular pontine nucleus, caudal
nTPM: 68.3
2092 Male, age 76, both hemispheres 74.5
2559 Male, age 74, both hemispheres 68.8
2332 Male, age 80, right hemisphere 67.6
2457 Female, age 91, both hemispheres 62.4
Reticular pontine nucleus, oral
nTPM: 70.1
2361 Male, age 74, both hemispheres 79.9
2012 Female, age 85, both hemispheres 77.7
1939 Male, age 80, both hemispheres 68.0
2167 Male, age 76, both hemispheres 65.2
2366 Female, age 91, both hemispheres 59.7
Reticulotegmental nucleus
nTPM: 68.9
2452 Male, age 74, both hemispheres 74.6
2325 Male, age 76, both hemispheres 72.0
2333 Male, age 80, both hemispheres 69.4
2322 Female, age 91, both hemispheres 59.8
Spinal trigeminal nucleus, caudal
nTPM: 68.6
2390 Female, age 91, both hemispheres 84.0
2447 Male, age 76, both hemispheres 74.3
2642 Male, age 74, both hemispheres 63.1
2308 Male, age 80, both hemispheres 62.8
2312 Male, age 61, both hemispheres 58.7
Spinal trigeminal nucleus, interpolar
nTPM: 78.6
2066 Male, age 76, right hemisphere 92.8
2625 Male, age 61, both hemispheres 92.3
2033 Male, age 80, both hemispheres 78.2
2389 Female, age 91, both hemispheres 65.2
2386 Female, age 85, both hemispheres 64.3
Spinal trigeminal nucleus, oral
nTPM: 67.7
2737 Female, age 85, both hemispheres 70.8
2164 Male, age 80, both hemispheres 69.4
1978 Male, age 76, both hemispheres 62.8
Spinal vestibular nucleus
nTPM: 68.9
2780 Male, age 80, both hemispheres 73.7
2384 Male, age 74, both hemispheres 71.5
2186 Female, age 91, both hemispheres 69.3
2748 Male, age 76, both hemispheres 68.1
2806 Female, age 85, both hemispheres 67.6
2796 Male, age 61, both hemispheres 63.2
Subcoeruleus area
nTPM: 68.2
2089 Male, age 76, left hemisphere 73.8
2451 Male, age 74, both hemispheres 73.4
2323 Female, age 91, left hemisphere 66.8
1958 Male, age 80, both hemispheres 65.2
2369 Female, age 85, left hemisphere 61.9
Superior olive
nTPM: 70.7
1875 Female, age 85, both hemispheres 84.1
2020 Male, age 76, both hemispheres 75.1
2329 Male, age 80, right hemisphere 66.7
2364 Male, age 74, right hemisphere 66.2
2561 Female, age 91, both hemispheres 61.4
Superior vestibular nucleus
nTPM: 63.1
2015 Male, age 80, both hemispheres 71.6
2061 Male, age 76, both hemispheres 69.8
2383 Male, age 74, both hemispheres 47.9
Ventral medullary reticular nucleus
nTPM: 69.3
2060 Male, age 76, both hemispheres 70.9
2372 Male, age 61, both hemispheres 67.7
Ventral periolivary nuclei
nTPM: 73.7
2130 Female, age 85, both hemispheres 83.8
2165 Male, age 80, both hemispheres 75.0
2023 Male, age 76, both hemispheres 73.5
2794 Female, age 91, left hemisphere 62.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 70.4
2741 Female, age 85, both hemispheres 78.5
1986 Male, age 76, both hemispheres 73.8
2302 Female, age 91, both hemispheres 70.3
2118 Male, age 80, both hemispheres 65.0
2180 Male, age 61, both hemispheres 64.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 66.6
1959 Male, age 76, both hemispheres 72.3
2449 Male, age 74, both hemispheres 69.3
2359 Male, age 61, both hemispheres 67.0
2161 Male, age 80, both hemispheres 66.0
2456 Female, age 91, both hemispheres 63.1
2840 Female, age 85, both hemispheres 61.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 51.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 44.6
FF:10165-103B3 76 years, female 48.8
FF:10182-103D2 60 years, female 40.4
Medulla oblongata
Scaled Tags Per Million: 42.4
FF:10038-101F2 18-64 years, mixed 50.2
FF:10155-103A2 76 years, female 39.7
FF:10174-103C3 60 years, female 37.3
Pons
Scaled Tags Per Million: 51.4
FF:10033-101E6 18-54 years, mixed 51.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 52.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 41.1
Samples: 4

Max nTPM: 48.8
Min nTPM: 33.4
Sample A Female 33.4
Sample B Female 41.8
Sample C Male 48.8
Sample D Male 40.2
Pons
nTPM: 52.2
Samples: 4

Max nTPM: 57.0
Min nTPM: 45.0
Sample A Female 51.9
Sample B Female 54.8
Sample C Male 57.0
Sample D Male 45.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 42.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 42.9
Samples: 4

Max nTPM: 49.6
Min nTPM: 37.0
Sample A Male 46.5
Sample B Male 37.0
Sample C Female 49.6
Sample D Female 38.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.1
76098296 Antisense, RP_060626_01_E07, Mouse strain C57BL/6J (56 days, male) 4.1
Pons
Expression energy: 4.0
76098296 Antisense, RP_060626_01_E07, Mouse strain C57BL/6J (56 days, male) 4.0

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