We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RAB11A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RAB11A
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:103.1 nTPM
HPA Brain:123.7 nTPM
GTEx:103.1 nTPM
FANTOM5:239.3 Scaled Tags Per Million
Pig:107.0 nTPM
Mouse:124.8 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA060686Antibody CAB013097
Glial cells Not detectedLow
Neuronal cells LowHigh




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 105.4
2481 Female, age 94, left hemisphere 122.0
2288 Male, age 75, left hemisphere 120.5
2846 Female, age 79, unknown 116.5
1857 Female, age 85, left hemisphere 107.5
2290 Female, age 72, unknown 106.0
1854 Male, age 80, left hemisphere 98.5
1781 Male, age 74, unknown 97.9
2289 Male, age 61, right hemisphere 74.4
Globus pallidus, externus
nTPM: 82.7
2772 Female, age 79, unknown 126.6
2395 Male, age 75, both hemispheres 102.6
1996 Male, age 80, right hemisphere 86.1
2646 Male, age 61, right hemisphere 54.5
2567 Female, age 72, unknown 43.6
Globus pallidus, internus
nTPM: 88.1
2287 Male, age 75, right hemisphere 116.0
2483 Female, age 94, right hemisphere 107.0
1818 Male, age 74, unknown 99.6
2778 Female, age 91, both hemispheres 89.8
2037 Male, age 80, right hemisphere 82.7
2566 Female, age 72, unknown 63.4
2111 Female, age 85, right hemisphere 58.5
Nucleus accumbens
nTPM: 110.0
1856 Female, age 91, right hemisphere 140.1
2286 Male, age 75, left hemisphere 119.7
2698 Female, age 72, unknown 112.1
1806 Female, age 85, left hemisphere 110.6
2391 Female, age 94, left hemisphere 108.2
1783 Male, age 74, unknown 103.8
2824 Male, age 61, right hemisphere 101.9
2732 Male, age 80, right hemisphere 83.8
Nucleus basalis of Meynert
nTPM: 93.5
2484 Female, age 94, left hemisphere 117.0
2821 Male, age 75, both hemispheres 106.9
2393 Male, age 80, right hemisphere 92.4
2569 Male, age 61, both hemispheres 57.5
Nucleus of the diagonal band
nTPM: 123.7
1812 Female, age 91, both hemispheres 153.4
2775 Male, age 80, right hemisphere 137.0
2195 Female, age 85, both hemispheres 120.9
2029 Male, age 61, right hemisphere 112.3
1979 Male, age 74, unknown 95.1
Putamen
nTPM: 98.7
2482 Female, age 94, left hemisphere 124.1
1937 Female, age 91, right hemisphere 121.5
1838 Male, age 80, right hemisphere 115.1
2466 Female, age 79, unknown 109.3
1829 Male, age 74, unknown 93.9
2647 Male, age 75, left hemisphere 67.5
2489 Female, age 72, unknown 59.6
Septal nuclei
nTPM: 111.6
2031 Female, age 72, unknown 149.2
1960 Male, age 74, unknown 142.8
2009 Female, age 91, both hemispheres 120.5
2629 Female, age 94, right hemisphere 99.5
2199 Male, age 80, right hemisphere 93.8
2059 Female, age 85, both hemispheres 91.1
2394 Male, age 61, left hemisphere 84.4
Stria terminalis, bed nucleus
nTPM: 110.3
1974 Female, age 91, both hemispheres 129.0
2486 Female, age 94, both hemispheres 104.5
2201 Male, age 74, unknown 97.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 97.0
Samples: 246

Max nTPM: 222.6
Min nTPM: 48.1
Std nTPM: 22.9
Median nTPM: 94.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 222.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 174.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 169.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 163.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 159.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 153.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 141.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 140.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 139.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 139.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 134.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 134.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 132.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 132.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 130.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 130.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 128.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 128.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 126.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 126.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 126.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 125.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 124.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 123.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 123.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 122.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 122.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 121.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 121.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 121.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 121.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 120.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 120.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 120.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 119.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 119.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 119.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 119.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 118.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 118.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 118.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 117.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 117.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 117.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 117.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 117.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 116.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 116.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 115.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 115.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 113.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 113.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 113.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 112.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 112.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 111.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 110.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 110.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 110.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 110.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 109.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 109.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 108.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 107.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 107.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 107.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 106.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 106.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 105.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 105.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 105.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 104.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 104.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 104.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 104.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 104.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 104.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 104.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 103.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 103.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 103.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 102.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 102.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 102.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 102.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 101.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 101.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 101.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 101.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 101.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 101.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 101.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 100.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 100.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 100.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 100.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 100.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 100.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 100.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 99.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 99.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 97.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 97.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 97.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 97.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 97.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 97.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 96.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 96.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 96.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 96.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 95.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 95.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 95.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 94.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 94.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 94.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 93.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 93.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 93.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 93.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 93.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 92.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 92.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 92.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 92.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 92.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 91.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 91.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 91.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 90.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 90.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 90.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 90.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 90.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 89.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 89.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 89.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 89.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 89.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 88.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 88.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 88.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 88.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 87.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 87.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 86.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 86.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 86.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 85.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 84.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 84.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 84.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 83.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 83.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 83.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 83.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 83.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 83.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 83.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 83.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 82.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 82.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 82.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 82.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 81.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 81.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 81.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 81.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 81.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 81.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 81.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 81.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 81.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 80.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 80.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 80.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 80.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 79.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 79.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 79.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 78.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 78.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 78.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 77.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 77.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 77.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 77.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 76.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 76.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 76.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 75.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 75.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 75.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 75.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 74.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 74.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 73.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 71.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 71.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 70.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 70.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 69.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 67.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 67.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 66.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 63.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 62.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 60.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 57.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 53.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 50.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 50.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 48.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 103.1
Samples: 246

Max nTPM: 188.9
Min nTPM: 52.4
Std nTPM: 24.3
Median nTPM: 103.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 188.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 164.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 161.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 160.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 159.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 156.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 149.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 148.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 146.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 146.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 142.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 142.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 141.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 141.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 139.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 138.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 137.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 136.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 136.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 135.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 135.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 135.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 135.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 135.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 135.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 134.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 133.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 133.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 133.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 132.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 132.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 131.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 130.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 130.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 130.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 129.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 128.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 128.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 128.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 127.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 127.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 127.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 126.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 126.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 125.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 125.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 125.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 125.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 124.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 123.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 123.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 123.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 122.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 122.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 121.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 121.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 121.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 121.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 121.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 120.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 120.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 119.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 119.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 118.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 118.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 118.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 117.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 117.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 117.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 117.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 117.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 116.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 116.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 115.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 115.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 115.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 115.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 114.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 114.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 114.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 113.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 113.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 113.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 113.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 113.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 112.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 111.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 111.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 110.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 110.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 110.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 110.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 109.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 109.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 109.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 109.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 108.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 108.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 108.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 108.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 108.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 107.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 107.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 107.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 106.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 106.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 106.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 106.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 106.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 106.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 106.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 106.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 105.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 105.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 105.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 104.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 104.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 104.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 104.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 104.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 104.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 103.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 102.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 102.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 102.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 102.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 102.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 101.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 101.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 101.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 101.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 101.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 100.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 100.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 100.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 100.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 100.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 100.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 99.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 98.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 98.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 98.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 98.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 98.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 97.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 97.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 97.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 97.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 96.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 96.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 96.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 96.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 96.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 96.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 95.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 95.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 94.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 93.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 93.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 93.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 93.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 92.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 92.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 91.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 91.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 91.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 91.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 90.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 90.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 90.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 90.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 89.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 88.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 88.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 87.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 86.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 86.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 86.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 86.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 85.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 85.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 85.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 84.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 84.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 84.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 84.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 83.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 83.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 83.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 83.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 82.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 82.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 82.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 82.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 81.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 81.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 81.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 80.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 80.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 79.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 79.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 79.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 77.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 77.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 77.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 77.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 76.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 75.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 75.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 75.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 74.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 73.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 73.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 73.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 72.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 72.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 70.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 70.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 69.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 68.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 68.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 68.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 67.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 67.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 67.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 66.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 65.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 64.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 64.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 64.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 63.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 63.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 62.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 62.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 61.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 59.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 58.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 56.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 55.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 55.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 54.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 52.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 92.1
Samples: 205

Max nTPM: 168.0
Min nTPM: 50.4
Std nTPM: 21.3
Median nTPM: 90.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 168.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 158.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 156.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 145.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 143.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 142.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 136.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 134.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 131.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 131.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 128.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 127.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 127.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 124.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 123.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 122.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 121.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 121.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 120.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 119.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 118.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 118.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 115.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 115.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 115.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 113.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 113.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 113.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 113.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 112.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 112.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 112.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 112.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 112.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 112.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 111.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 111.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 110.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 110.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 110.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 110.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 110.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 109.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 108.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 106.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 106.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 106.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 105.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 104.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 104.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 104.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 104.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 103.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 103.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 103.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 102.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 102.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 102.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 102.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 102.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 101.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 101.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 101.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 100.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 100.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 100.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 100.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 100.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 100.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 100.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 99.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 99.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 99.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 98.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 98.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 98.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 97.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 97.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 97.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 96.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 96.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 95.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 95.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 95.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 95.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 95.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 95.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 94.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 94.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 93.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 93.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 93.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 93.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 92.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 92.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 92.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 92.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 91.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 91.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 91.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 90.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 90.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 90.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 90.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 88.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 88.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 88.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 88.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 87.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 87.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 87.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 87.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 87.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 86.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 86.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 86.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 86.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 86.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 86.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 85.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 85.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 85.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 85.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 84.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 84.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 84.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 83.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 83.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 83.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 82.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 81.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 80.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 80.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 80.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 80.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 79.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 79.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 79.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 79.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 78.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 78.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 78.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 78.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 78.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 78.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 77.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 77.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 77.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 77.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 77.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 77.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 77.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 77.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 76.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 76.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 75.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 75.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 75.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 74.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 74.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 74.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 73.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 73.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 73.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 72.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 72.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 72.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 71.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 71.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 70.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 70.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 70.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 70.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 69.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 69.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 69.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 69.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 69.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 68.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 68.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 66.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 65.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 64.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 64.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 63.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 62.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 62.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 62.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 59.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 57.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 55.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 54.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 53.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 52.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 51.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 50.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

239.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 177.8
FF:10164-103B2 76 years, female 177.8
Nucleus accumbens
Scaled Tags Per Million: 239.3
FF:10037-101F1 23-56 years, mixed 239.3
Putamen
Scaled Tags Per Million: 199.3
FF:10176-103C5 60 years, female 199.3
Globus pallidus
Scaled Tags Per Million: 135.7
FF:10175-103C4 60 years, female 161.6
FF:10161-103A8 76 years, female 109.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.0
Pig sample Sample description nTPM
Caudate
nTPM: 84.6
Samples: 4

Max nTPM: 100.7
Min nTPM: 74.9
Sample A Female 84.4
Sample B Female 74.9
Sample C Male 100.7
Sample D Male 78.5
Putamen
nTPM: 107.0
Samples: 4

Max nTPM: 158.8
Min nTPM: 84.7
Sample A Female 84.7
Sample B Female 90.2
Sample C Male 158.8
Sample D Male 94.1
Septum
nTPM: 91.5
Samples: 4

Max nTPM: 107.1
Min nTPM: 76.0
Sample A Female 94.8
Sample B Female 76.0
Sample C Male 107.1
Sample D Male 88.1
Ventral pallidum
nTPM: 83.8
Samples: 4

Max nTPM: 100.2
Min nTPM: 73.6
Sample A Female 80.4
Sample B Female 80.9
Sample C Male 100.2
Sample D Male 73.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 94.6
Samples: 4

Max nTPM: 98.1
Min nTPM: 87.1
Sample A Male 96.8
Sample B Male 87.1
Sample C Female 98.1
Sample D Female 96.2
Septum
nTPM: 124.9
Samples: 4

Max nTPM: 137.2
Min nTPM: 114.2
Sample A Male 119.8
Sample B Male 137.2
Sample C Female 128.2
Sample D Female 114.2
Ventral forebrain
nTPM: 111.5
Samples: 4

Max nTPM: 119.7
Min nTPM: 99.9
Sample A Male 99.9
Sample B Male 115.7
Sample C Female 119.7
Sample D Female 110.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71724017 Antisense, RP_050921_01_D03, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71724017 Antisense, RP_050921_01_D03, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org