HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.3 nTPM
HPA Brain:7.1 nTPM
GTEx:24.3 nTPM
FANTOM5:5.5 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:25.2 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009410Antibody HPA010637
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 7.1
Sample id Sample description nTPM
Hippocampus
nTPM: 5.2
2148 Female, age 91, left hemisphere 7.3
1898 Male, age 80, left hemisphere 6.0
1911 Female, age 85, right hemisphere 5.7
2621 Female, age 67, right hemisphere 5.1
2529 Female, age 94, left hemisphere 4.8
1855 Male, age 76, left hemisphere 2.4
Dentate gyrus
nTPM: 4.0
1927 Female, age 91, both hemispheres 8.1
2531 Female, age 67, both hemispheres 4.5
2246 Female, age 85, both hemispheres 3.8
2528 Male, age 74, both hemispheres 3.3
2010 Male, age 76, both hemispheres 2.2
2530 Female, age 94, left hemisphere 2.0
Entorhinal gyrus
nTPM: 3.9
2686 Male, age 75, right hemisphere 5.1
2764 Male, age 80, right hemisphere 4.8
1938 Female, age 85, left hemisphere 4.0
2117 Female, age 91, right hemisphere 3.4
2613 Female, age 94, left hemisphere 3.2
1787 Male, age 76, left hemisphere 3.0
Hippocampus, CA1
nTPM: 7.1
2749 Male, age 80, left hemisphere 13.4
2082 Female, age 91, right hemisphere 9.5
2527 Male, age 74, both hemispheres 6.1
1873 Female, age 85, both hemispheres 4.2
2045 Male, age 76, both hemispheres 2.2
Hippocampus, CA2
nTPM: 4.4
2113 Female, age 91, right hemisphere 7.7
1963 Male, age 80, left hemisphere 5.9
2249 Male, age 74, both hemispheres 5.7
2437 Female, age 94, left hemisphere 3.2
1892 Male, age 76, both hemispheres 2.3
1940 Female, age 85, left hemisphere 1.4
Hippocampus, CA3
nTPM: 6.2
2137 Male, age 80, left hemisphere 16.3
2861 Female, age 67, both hemispheres 5.5
2620 Female, age 94, left hemisphere 5.3
1891 Female, age 85, both hemispheres 4.4
2436 Male, age 74, both hemispheres 3.1
1867 Male, age 76, both hemispheres 2.8
Parahippocampal cortex
nTPM: 4.1
2245 Female, age 91, both hemispheres 7.3
2250 Female, age 67, right hemisphere 5.2
1933 Female, age 85, both hemispheres 4.4
2693 Female, age 94, both hemispheres 4.2
1850 Male, age 80, both hemispheres 3.9
2532 Female, age 72, left hemisphere 3.8
1990 Female, age 91, right hemisphere 3.1
2692 Male, age 74, both hemispheres 3.0
2622 Female, age 67, right hemisphere 2.9
2018 Male, age 76, both hemispheres 2.8
Perirhinal gyrus
nTPM: 3.1
1847 Female, age 91, left hemisphere 4.8
1841 Female, age 85, right hemisphere 3.8
1794 Male, age 80, right hemisphere 2.8
2521 Female, age 94, right hemisphere 2.3
2848 Male, age 76, right hemisphere 2.0
Subiculum
nTPM: 3.9
1901 Male, age 80, both hemispheres 7.6
2729 Female, age 91, right hemisphere 4.3
1977 Female, age 85, both hemispheres 4.0
2619 Male, age 74, both hemispheres 2.8
2042 Male, age 76, both hemispheres 2.5
2438 Female, age 94, left hemisphere 1.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 120.7
Min nTPM: 0.9
Std nTPM: 18.3
Median nTPM: 19.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 120.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 80.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 75.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 74.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 71.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 68.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 66.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 64.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 64.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 59.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.5
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 4.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.3
Samples: 4

Max nTPM: 21.8
Min nTPM: 14.6
Sample A Female 21.8
Sample B Female 18.9
Sample C Male 18.0
Sample D Male 14.6
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 14.6
Min nTPM: 7.0
Sample A Female 8.7
Sample B Female 14.6
Sample C Male 7.0
Sample D Male 11.8
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.8
Sample A Female 17.5
Sample B Female 18.9
Sample C Male 19.1
Sample D Male 16.8
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.7
Sample A Female 9.7
Sample B Female 12.5
Sample C Male 14.8
Sample D Male 10.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 18.0
Sample A Male 21.7
Sample B Male 18.0
Sample C Female 22.5
Sample D Female 30.8
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 30.8
Min nTPM: 21.1
Sample A Male 23.1
Sample B Male 25.8
Sample C Female 30.8
Sample D Female 21.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70946196 Antisense, RP_050414_04_C05, Mouse strain C57BL/6J (56 days, male) 7.6
72340182 Antisense, RP_051101_02_B03, Mouse strain C57BL/6J (56 days, male) 5.6

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