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BRF2
HPA
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  • BRF2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BRF2
Synonyms BRFU, FLJ11052, TFIIIB50
Gene descriptioni

Full gene name according to HGNC.

BRF2 RNA polymerase III transcription initiation factor subunit
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband p11.23
Chromosome location (bp) 37843268 - 37849861
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000104221 (version 109)
Entrez gene 55290
HGNC HGNC:17298
UniProt Q9HAW0 (UniProt - Evidence at protein level)
neXtProt NX_Q9HAW0
GeneCards BRF2
Antibodypedia BRF2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

General activator of RNA polymerase III transcription. Factor exclusively required for RNA polymerase III transcription of genes with promoter elements upstream of the initiation sites 1, 2, 3, 4. Contributes to the regulation of gene expression; functions as activator in the absence of oxidative stress 5. Down-regulates expression of target genes in response to oxidative stress 6. Overexpression protects cells against apoptosis in response to oxidative stress 7.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Stress response, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes one of the multiple subunits of the RNA polymerase III transcription factor complex required for transcription of genes with promoter elements upstream of the initiation site. The product of this gene, a TFIIB-like factor, is directly recruited to the TATA-box of polymerase III small nuclear RNA gene promoters through its interaction with the TATA-binding protein. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BRF2-201
ENSP00000220659
ENST00000220659
Q9HAW0
[Direct mapping] Transcription factor IIIB 50 kDa subunit
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000126 [transcription factor TFIIIB complex]
GO:0001006 [RNA polymerase III type 3 promoter sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006352 [DNA-templated transcription initiation]
GO:0006359 [regulation of transcription by RNA polymerase III]
GO:0017025 [TBP-class protein binding]
GO:0034599 [cellular response to oxidative stress]
GO:0046872 [metal ion binding]
GO:0070897 [transcription preinitiation complex assembly]
GO:0097550 [transcription preinitiation complex]
Show all
419 aa
46.5 kDa
No 0
BRF2-202
ENSP00000430107
ENST00000520601
E5RGX1
[Direct mapping] Transcription factor IIIB 50 kDa subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006352 [DNA-templated transcription initiation]
GO:0017025 [TBP-class protein binding]
GO:0070897 [transcription preinitiation complex assembly]
Show all
202 aa
22.3 kDa
No 0
BRF2-203
ENSP00000430193
ENST00000521170
E5RGF6
[Direct mapping] Transcription factor IIIB 50 kDa subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006352 [DNA-templated transcription initiation]
GO:0070897 [transcription preinitiation complex assembly]
Show all
72 aa
7.9 kDa
No 0

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