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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Medium
Synapses: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:90.3 nTPM
HPA Brain:112.8 nTPM
GTEx:90.3 nTPM
FANTOM5:538.0 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:141.3 nTPM
Allen mouse:12.7 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA023099
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Medium
Synapses Low

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA056734
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Medium
Synapses Not detected

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023099Antibody HPA056734Antibody CAB002138
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumMediumNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 105.1
2290 Female, age 72, unknown 145.0
1857 Female, age 85, left hemisphere 138.0
1854 Male, age 80, left hemisphere 137.4
1781 Male, age 74, unknown 129.2
2846 Female, age 79, unknown 110.8
2289 Male, age 61, right hemisphere 87.6
2288 Male, age 75, left hemisphere 54.4
2481 Female, age 94, left hemisphere 38.5
Globus pallidus, externus
nTPM: 32.8
2646 Male, age 61, right hemisphere 40.9
2567 Female, age 72, unknown 40.7
2395 Male, age 75, both hemispheres 38.6
2772 Female, age 79, unknown 23.0
1996 Male, age 80, right hemisphere 21.1
Globus pallidus, internus
nTPM: 31.0
2566 Female, age 72, unknown 42.6
2483 Female, age 94, right hemisphere 35.6
2111 Female, age 85, right hemisphere 33.8
2778 Female, age 91, both hemispheres 31.8
2287 Male, age 75, right hemisphere 31.6
2037 Male, age 80, right hemisphere 25.9
1818 Male, age 74, unknown 15.7
Nucleus accumbens
nTPM: 112.8
1783 Male, age 74, unknown 178.7
2824 Male, age 61, right hemisphere 171.0
1856 Female, age 91, right hemisphere 160.3
1806 Female, age 85, left hemisphere 123.8
2698 Female, age 72, unknown 112.7
2732 Male, age 80, right hemisphere 61.0
2286 Male, age 75, left hemisphere 56.9
2391 Female, age 94, left hemisphere 37.8
Nucleus basalis of Meynert
nTPM: 53.1
2393 Male, age 80, right hemisphere 79.9
2821 Male, age 75, both hemispheres 49.0
2484 Female, age 94, left hemisphere 48.6
2569 Male, age 61, both hemispheres 35.1
Nucleus of the diagonal band
nTPM: 60.3
2029 Male, age 61, right hemisphere 76.3
2195 Female, age 85, both hemispheres 64.0
2775 Male, age 80, right hemisphere 58.0
1812 Female, age 91, both hemispheres 54.4
1979 Male, age 74, unknown 48.6
Putamen
nTPM: 87.6
1838 Male, age 80, right hemisphere 157.0
1937 Female, age 91, right hemisphere 138.5
1829 Male, age 74, unknown 98.6
2466 Female, age 79, unknown 76.4
2489 Female, age 72, unknown 51.7
2647 Male, age 75, left hemisphere 47.7
2482 Female, age 94, left hemisphere 43.6
Septal nuclei
nTPM: 57.3
2394 Male, age 61, left hemisphere 80.2
2629 Female, age 94, right hemisphere 65.1
2059 Female, age 85, both hemispheres 55.1
2031 Female, age 72, unknown 52.9
2009 Female, age 91, both hemispheres 52.2
2199 Male, age 80, right hemisphere 48.2
1960 Male, age 74, unknown 47.4
Stria terminalis, bed nucleus
nTPM: 63.3
2486 Female, age 94, both hemispheres 70.4
2201 Male, age 74, unknown 66.1
1974 Female, age 91, both hemispheres 53.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 72.5
Samples: 246

Max nTPM: 509.7
Min nTPM: 1.5
Std nTPM: 73.0
Median nTPM: 48.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 509.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 412.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 275.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 265.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 263.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 257.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 251.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 248.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 232.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 232.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 229.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 218.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 210.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 210.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 210.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 206.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 199.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 199.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 192.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 191.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 186.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 181.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 180.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 171.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 170.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 168.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 164.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 161.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 160.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 159.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 158.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 155.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 155.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 154.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 153.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 144.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 141.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 139.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 139.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 138.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 135.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 132.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 132.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 130.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 129.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 128.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 123.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 122.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 122.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 116.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 114.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 114.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 112.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 111.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 110.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 110.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 106.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 103.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 101.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 99.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 99.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 99.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 97.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 94.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 94.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 93.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 92.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 91.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 89.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 87.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 86.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 86.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 85.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 85.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 84.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 82.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 82.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 82.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 82.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 82.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 81.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 80.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 79.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 78.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 78.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 77.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 75.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 75.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 74.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 73.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 72.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 70.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 68.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 67.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 67.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 65.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 64.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 59.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 58.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 57.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 57.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 56.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 55.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 54.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 53.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 52.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 51.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 49.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 47.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 45.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 44.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 43.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 43.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 42.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 41.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 40.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 40.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 39.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 39.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 39.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 39.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 38.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 37.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 37.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 36.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 36.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 35.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 35.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 34.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 33.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 33.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 33.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 32.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 31.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 31.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 31.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 30.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 30.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 29.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 29.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 28.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 26.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 25.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 24.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 24.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 24.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 24.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 23.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 22.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 22.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 22.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 21.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 21.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 20.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 20.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 20.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 20.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 18.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 18.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 17.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 16.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 15.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 15.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 15.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 15.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 14.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 14.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 13.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 13.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 12.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 12.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 11.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 11.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 11.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 11.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 11.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 10.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 10.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 10.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 10.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 9.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 9.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 8.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 8.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 8.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 7.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 7.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 7.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 7.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 7.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 6.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 5.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 4.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 3.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 3.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 2.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 90.3
Samples: 246

Max nTPM: 329.0
Min nTPM: 1.0
Std nTPM: 65.8
Median nTPM: 78.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 329.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 265.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 254.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 253.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 251.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 247.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 220.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 215.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 210.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 207.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 206.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 206.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 204.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 202.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 199.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 195.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 194.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 194.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 194.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 192.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 187.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 187.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 183.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 183.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 181.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 179.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 179.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 178.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 176.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 176.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 174.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 170.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 168.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 167.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 167.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 166.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 166.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 163.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 163.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 163.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 161.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 161.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 161.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 160.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 160.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 157.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 156.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 156.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 155.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 155.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 154.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 154.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 152.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 149.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 147.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 145.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 144.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 141.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 140.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 139.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 139.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 139.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 139.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 137.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 134.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 133.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 132.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 131.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 130.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 129.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 126.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 123.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 123.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 122.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 121.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 121.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 121.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 121.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 120.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 120.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 119.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 116.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 116.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 115.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 114.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 112.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 111.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 111.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 110.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 108.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 108.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 108.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 105.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 103.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 103.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 102.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 102.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 100.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 99.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 98.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 97.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 96.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 96.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 96.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 94.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 94.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 93.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 93.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 90.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 89.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 88.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 86.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 86.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 85.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 83.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 83.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 83.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 83.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 83.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 80.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 80.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 80.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 79.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 78.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 77.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 76.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 75.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 75.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 75.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 74.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 74.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 74.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 73.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 72.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 71.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 69.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 66.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 66.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 66.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 65.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 65.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 64.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 63.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 63.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 61.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 61.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 61.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 60.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 59.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 58.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 57.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 55.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 54.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 52.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 51.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 50.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 50.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 49.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 49.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 49.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 48.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 47.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 46.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 46.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 46.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 44.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 44.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 44.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 43.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 42.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 42.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 41.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 36.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 35.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 32.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 30.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 29.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 29.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 28.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 26.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 24.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 24.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 23.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 23.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 22.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 22.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 21.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 21.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 20.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 20.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 20.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 20.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 20.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 19.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 19.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 16.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 16.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 16.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 15.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 15.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 15.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 14.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 14.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 13.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 13.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 13.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 12.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 12.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 12.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 10.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 9.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 8.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 7.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 6.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 6.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 5.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 5.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 4.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 4.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 3.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1.0
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Brain - Putamen (basal ganglia)
Average nTPM: 47.4
Samples: 205

Max nTPM: 224.3
Min nTPM: 0.7
Std nTPM: 48.8
Median nTPM: 28.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 224.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 205.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 197.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 186.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 179.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 178.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 176.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 176.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 172.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 160.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 157.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 152.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 148.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 143.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 131.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 129.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 127.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 122.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 122.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 121.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 117.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 115.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 113.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 113.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 111.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 108.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 106.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 105.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 105.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 101.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 101.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 100.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 99.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 98.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 96.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 89.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 88.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 84.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 84.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 83.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 82.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 82.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 80.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 78.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 78.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 77.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 73.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 67.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 67.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 65.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 65.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 65.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 64.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 64.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 64.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 63.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 62.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 62.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 62.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 60.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 60.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 58.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 54.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 53.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 53.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 52.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 48.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 47.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 45.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 43.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 42.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 42.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 41.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 40.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 39.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 39.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 38.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 38.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 38.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 38.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 35.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 35.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 34.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 33.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 32.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 31.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 31.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 30.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 29.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 29.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 29.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 28.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 28.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 27.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 27.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 27.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 27.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 27.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 26.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 26.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 25.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 25.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 24.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 24.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 24.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 23.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 23.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 22.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 20.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 20.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 20.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 19.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 19.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 19.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 19.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 19.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 18.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 17.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 16.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 16.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 16.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 16.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 16.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 15.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 14.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 13.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 13.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 13.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 13.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 12.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 12.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 12.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 11.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 11.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 10.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 9.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 8.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 8.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 8.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 8.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 7.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 7.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 7.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 7.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 7.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 5.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 5.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 5.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 5.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 4.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 4.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 4.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 4.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 3.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 3.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 3.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 2.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 2.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 2.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 2.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 0.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

538.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 538.0
FF:10164-103B2 76 years, female 538.0
Nucleus accumbens
Scaled Tags Per Million: 211.4
FF:10037-101F1 23-56 years, mixed 211.4
Putamen
Scaled Tags Per Million: 510.8
FF:10176-103C5 60 years, female 510.8
Globus pallidus
Scaled Tags Per Million: 161.0
FF:10175-103C4 60 years, female 280.1
FF:10161-103A8 76 years, female 41.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
Pig sample Sample description nTPM
Caudate
nTPM: 65.5
Samples: 4

Max nTPM: 73.0
Min nTPM: 58.1
Sample A Female 66.4
Sample B Female 64.3
Sample C Male 73.0
Sample D Male 58.1
Putamen
nTPM: 54.7
Samples: 4

Max nTPM: 76.6
Min nTPM: 22.5
Sample A Female 22.5
Sample B Female 56.1
Sample C Male 76.6
Sample D Male 63.4
Septum
nTPM: 15.8
Samples: 4

Max nTPM: 28.3
Min nTPM: 3.6
Sample A Female 28.3
Sample B Female 14.4
Sample C Male 16.8
Sample D Male 3.6
Ventral pallidum
nTPM: 29.2
Samples: 4

Max nTPM: 48.9
Min nTPM: 6.4
Sample A Female 48.9
Sample B Female 14.5
Sample C Male 6.4
Sample D Male 46.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 141.3
Samples: 4

Max nTPM: 153.4
Min nTPM: 112.1
Sample A Male 148.9
Sample B Male 153.4
Sample C Female 112.1
Sample D Female 150.8
Septum
nTPM: 60.5
Samples: 4

Max nTPM: 63.8
Min nTPM: 55.0
Sample A Male 59.7
Sample B Male 63.4
Sample C Female 55.0
Sample D Female 63.8
Ventral forebrain
nTPM: 49.2
Samples: 4

Max nTPM: 54.3
Min nTPM: 46.3
Sample A Male 54.3
Sample B Male 46.3
Sample C Female 48.5
Sample D Female 47.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.7
75496471 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 15.6
75496144 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 15.4
75496143 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 15.0
75492703 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 14.7
75496470 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 14.7
75457491 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 14.6
75492693 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 14.6
75496142 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 14.1
75496460 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 14.0
75496141 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 13.8
75496450 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 13.6
75457490 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 13.4
75492683 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 13.4
75492673 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 13.3
75457488 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 12.9
75457489 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 12.8
79556672 Antisense, RP_071204_01_C05, Mouse strain C57BL/6J (56 days, male) 10.9
71717640 Antisense, RP_050713_02_B11, Mouse strain C57BL/6J (56 days, male) 7.0
70919860 Antisense, RP_050713_02_B11, Mouse strain C57BL/6J (56 days, male) 3.4
Pallidum
Expression energy: 7.7
75492683 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 10.9
75492673 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 9.8
75492703 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 9.1
75496141 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 9.1
75496450 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 9.1
75496460 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 9.1
75496142 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 8.9
75457489 Antisense, RP_060523_03_F04, Mouse strain C57BL/6J (56 days, male) 8.8
75496143 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 8.8
75492693 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 8.7
75496471 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 8.7
75496470 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 8.6
75457488 Antisense, RP_060523_03_E04, Mouse strain C57BL/6J (56 days, male) 8.4
75457491 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 8.3
75496144 Antisense, RP_060523_03_H04, Mouse strain C57BL/6J (56 days, male) 8.1
75457490 Antisense, RP_060523_03_G04, Mouse strain C57BL/6J (56 days, male) 7.5
79556672 Antisense, RP_071204_01_C05, Mouse strain C57BL/6J (56 days, male) 4.7
71717640 Antisense, RP_050713_02_B11, Mouse strain C57BL/6J (56 days, male) 2.7
70919860 Antisense, RP_050713_02_B11, Mouse strain C57BL/6J (56 days, male) 2.6

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