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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:56.4 nTPM
HPA Brain:18.9 nTPM
GTEx:56.4 nTPM
FANTOM5:213.9 Scaled Tags Per Million
Pig:140.5 nTPM
Mouse:103.8 nTPM
Allen mouse:3.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA022838
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 15.3
1857 Female, age 85, left hemisphere 17.5
2289 Male, age 61, right hemisphere 16.1
2288 Male, age 75, left hemisphere 15.8
1854 Male, age 80, left hemisphere 15.7
2290 Female, age 72, unknown 15.1
2846 Female, age 79, unknown 14.9
2481 Female, age 94, left hemisphere 13.9
1781 Male, age 74, unknown 13.1
Globus pallidus, externus
nTPM: 18.9
1996 Male, age 80, right hemisphere 22.5
2395 Male, age 75, both hemispheres 20.2
2772 Female, age 79, unknown 19.3
2646 Male, age 61, right hemisphere 17.6
2567 Female, age 72, unknown 15.0
Globus pallidus, internus
nTPM: 18.9
2778 Female, age 91, both hemispheres 22.1
2287 Male, age 75, right hemisphere 21.5
2111 Female, age 85, right hemisphere 21.3
1818 Male, age 74, unknown 19.6
2037 Male, age 80, right hemisphere 18.1
2483 Female, age 94, right hemisphere 17.6
2566 Female, age 72, unknown 12.4
Nucleus accumbens
nTPM: 15.1
1806 Female, age 85, left hemisphere 17.8
2286 Male, age 75, left hemisphere 17.0
2824 Male, age 61, right hemisphere 15.1
2698 Female, age 72, unknown 15.0
2732 Male, age 80, right hemisphere 14.8
2391 Female, age 94, left hemisphere 14.2
1856 Female, age 91, right hemisphere 13.4
1783 Male, age 74, unknown 13.1
Nucleus basalis of Meynert
nTPM: 14.1
2569 Male, age 61, both hemispheres 15.7
2393 Male, age 80, right hemisphere 14.3
2821 Male, age 75, both hemispheres 13.4
2484 Female, age 94, left hemisphere 12.9
Nucleus of the diagonal band
nTPM: 11.7
1812 Female, age 91, both hemispheres 14.3
1979 Male, age 74, unknown 11.6
2029 Male, age 61, right hemisphere 11.3
2775 Male, age 80, right hemisphere 11.1
2195 Female, age 85, both hemispheres 10.4
Putamen
nTPM: 15.0
1937 Female, age 91, right hemisphere 15.9
2482 Female, age 94, left hemisphere 15.9
1829 Male, age 74, unknown 15.8
2489 Female, age 72, unknown 15.1
1838 Male, age 80, right hemisphere 14.8
2466 Female, age 79, unknown 13.7
2647 Male, age 75, left hemisphere 13.4
Septal nuclei
nTPM: 12.6
2199 Male, age 80, right hemisphere 14.7
2629 Female, age 94, right hemisphere 13.9
2009 Female, age 91, both hemispheres 13.1
2394 Male, age 61, left hemisphere 13.0
2031 Female, age 72, unknown 12.6
2059 Female, age 85, both hemispheres 10.9
1960 Male, age 74, unknown 10.2
Stria terminalis, bed nucleus
nTPM: 10.6
1974 Female, age 91, both hemispheres 11.6
2201 Male, age 74, unknown 10.3
2486 Female, age 94, both hemispheres 10.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.4
Samples: 246

Max nTPM: 102.6
Min nTPM: 30.3
Std nTPM: 11.1
Median nTPM: 48.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 102.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 97.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 88.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 86.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 81.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 78.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 77.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 77.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 74.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 71.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 71.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 71.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 71.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 68.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 67.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 67.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 67.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 66.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 65.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 65.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 65.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 64.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 64.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 63.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 63.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 63.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 63.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 62.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 62.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 62.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 61.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 61.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 61.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 61.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 61.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 60.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 60.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 60.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 60.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 59.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 59.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 59.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 58.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 58.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 58.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 58.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 57.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 57.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 57.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 57.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 57.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 57.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 57.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 57.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 56.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 56.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 56.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 56.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 56.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 56.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 56.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 55.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 55.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 54.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 54.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 53.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 53.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 52.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 52.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 51.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 51.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 51.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 51.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 51.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 51.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 50.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 50.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 50.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 50.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 50.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 50.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 50.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 49.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 49.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 49.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 49.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 49.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 48.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 48.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 48.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 48.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 48.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 48.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 47.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 47.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 47.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 47.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 47.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 47.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 47.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 47.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 47.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 46.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 46.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 46.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 46.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 46.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 46.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 46.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 45.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 45.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 45.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 45.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 45.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 45.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 45.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 45.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 45.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 44.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 44.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 44.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 44.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 44.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 44.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 44.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 44.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 44.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 44.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 43.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 43.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 43.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 43.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 43.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 43.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 43.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 43.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 43.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 43.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 42.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 42.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 42.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 42.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 41.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 41.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 41.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 40.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 40.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 40.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 39.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 39.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 39.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 38.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 38.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 38.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 38.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 38.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 38.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 38.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 38.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 38.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 37.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 36.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 36.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 35.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 34.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 33.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 33.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 32.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 32.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 30.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 48.3
Samples: 246

Max nTPM: 128.4
Min nTPM: 26.4
Std nTPM: 13.8
Median nTPM: 44.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 128.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 104.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 102.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 88.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 86.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 81.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 81.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 79.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 78.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 76.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 75.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 73.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 71.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 71.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 71.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 71.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 71.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 70.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 69.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 69.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 68.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 67.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 66.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 66.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 66.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 64.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 64.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 64.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 63.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 63.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 62.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 62.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 61.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 61.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 60.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 60.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 60.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 60.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 59.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 59.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 58.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 58.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 57.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 57.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 57.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 56.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 56.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 56.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 56.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 55.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 55.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 55.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 55.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 55.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 55.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 54.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 54.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 54.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 54.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 54.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 54.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 53.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 53.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 53.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 53.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 53.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 53.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 53.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 52.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 52.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 52.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 51.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 51.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 51.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 51.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 51.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 51.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 51.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 51.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 50.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 50.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 50.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 50.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 49.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 49.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 49.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 49.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 49.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 49.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 49.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 49.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 48.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 48.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 48.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 48.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 47.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 47.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 47.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 47.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 47.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 47.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 47.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 46.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 46.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 46.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 46.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 46.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 45.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 45.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 45.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 44.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 44.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 44.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 44.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 44.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 44.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 44.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 44.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 43.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 43.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 43.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 43.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 43.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 43.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 43.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 43.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 43.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 43.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 43.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 43.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 43.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 42.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 42.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 42.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 42.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 42.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 42.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 42.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 42.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 42.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 42.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 41.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 41.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 41.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 41.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 41.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 41.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 41.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 41.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 41.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 41.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 40.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 40.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 40.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 40.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 40.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 40.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 40.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 39.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 39.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 39.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 39.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 39.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 38.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 38.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 38.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 38.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 38.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 38.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 38.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 38.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 37.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 37.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 37.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 37.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 37.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 37.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 37.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 37.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 37.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 37.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 37.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 37.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 37.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 37.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 37.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 37.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 36.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 36.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 36.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 36.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 36.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 36.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 35.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 35.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 35.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 35.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 35.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 35.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 35.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 34.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 34.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 34.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 34.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 34.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 34.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 34.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 34.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 34.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 33.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 33.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 32.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 32.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 32.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 31.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 31.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 31.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 30.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 30.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 30.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 30.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 29.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 27.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 27.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 26.4
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Brain - Putamen (basal ganglia)
Average nTPM: 56.4
Samples: 205

Max nTPM: 139.0
Min nTPM: 34.0
Std nTPM: 13.6
Median nTPM: 54.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 139.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 111.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 97.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 92.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 91.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 84.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 82.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 80.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 80.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 79.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 79.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 78.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 78.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 78.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 78.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 78.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 76.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 76.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 76.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 74.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 72.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 72.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 70.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 70.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 69.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 68.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 68.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 67.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 67.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 67.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 67.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 66.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 66.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 65.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 65.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 65.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 64.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 64.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 64.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 63.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 63.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 63.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 63.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 63.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 62.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 62.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 61.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 61.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 61.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 61.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 60.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 60.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 60.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 59.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 59.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 59.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 59.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 59.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 59.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 59.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 59.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 58.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 58.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 58.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 58.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 58.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 58.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 58.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 58.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 57.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 57.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 57.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 57.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 57.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 57.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 56.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 56.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 56.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 56.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 56.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 55.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 55.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 55.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 55.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 55.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 55.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 54.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 54.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 54.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 53.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 53.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 53.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 53.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 53.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 52.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 52.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 52.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 52.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 52.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 52.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 51.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 51.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 51.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 51.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 51.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 51.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 50.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 50.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 50.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 50.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 50.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 50.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 49.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 49.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 49.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 49.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 49.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 49.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 48.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 48.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 48.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 48.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 48.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 48.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 48.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 47.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 47.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 47.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 47.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 47.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 46.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 46.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 46.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 46.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 46.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 45.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 45.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 45.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 45.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 45.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 44.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 44.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 44.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 44.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 43.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 43.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 43.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 43.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 42.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 42.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 42.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 42.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 42.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 42.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 42.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 42.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 41.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 41.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 41.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 40.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 39.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 39.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 38.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 38.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 38.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 37.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 36.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 34.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 34.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

213.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 130.4
FF:10164-103B2 76 years, female 130.4
Nucleus accumbens
Scaled Tags Per Million: 98.6
FF:10037-101F1 23-56 years, mixed 98.6
Putamen
Scaled Tags Per Million: 181.9
FF:10176-103C5 60 years, female 181.9
Globus pallidus
Scaled Tags Per Million: 213.9
FF:10175-103C4 60 years, female 237.7
FF:10161-103A8 76 years, female 190.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.5
Pig sample Sample description nTPM
Caudate
nTPM: 100.0
Samples: 4

Max nTPM: 114.3
Min nTPM: 89.2
Sample A Female 114.3
Sample B Female 94.2
Sample C Male 102.2
Sample D Male 89.2
Putamen
nTPM: 122.2
Samples: 4

Max nTPM: 139.3
Min nTPM: 103.9
Sample A Female 139.2
Sample B Female 103.9
Sample C Male 139.3
Sample D Male 106.5
Septum
nTPM: 140.6
Samples: 4

Max nTPM: 151.9
Min nTPM: 126.9
Sample A Female 145.2
Sample B Female 126.9
Sample C Male 151.9
Sample D Male 138.2
Ventral pallidum
nTPM: 112.1
Samples: 4

Max nTPM: 131.6
Min nTPM: 94.0
Sample A Female 123.7
Sample B Female 131.6
Sample C Male 94.0
Sample D Male 99.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 103.9
Samples: 4

Max nTPM: 106.8
Min nTPM: 96.8
Sample A Male 106.3
Sample B Male 96.8
Sample C Female 106.8
Sample D Female 105.5
Septum
nTPM: 103.0
Samples: 4

Max nTPM: 107.3
Min nTPM: 94.6
Sample A Male 94.6
Sample B Male 106.1
Sample C Female 107.3
Sample D Female 103.9
Ventral forebrain
nTPM: 99.8
Samples: 4

Max nTPM: 107.1
Min nTPM: 95.0
Sample A Male 107.1
Sample B Male 97.6
Sample C Female 95.0
Sample D Female 99.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.6
513494 Antisense, RP_040810_02_A04, Mouse strain C57BL/6J (56 days, male) 4.0
81599618 Antisense, RP_071127_04_D06, Mouse strain C57BL/6J (56 days, male) 3.1
Pallidum
Expression energy: 2.8
513494 Antisense, RP_040810_02_A04, Mouse strain C57BL/6J (56 days, male) 2.9
81599618 Antisense, RP_071127_04_D06, Mouse strain C57BL/6J (56 days, male) 2.7

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