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PYCR3
HPA
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  • PYCR3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PYCR3
Synonyms FLJ13852, PYCRL
Gene descriptioni

Full gene name according to HGNC.

Pyrroline-5-carboxylate reductase 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband q24.3
Chromosome location (bp) 143603210 - 143609773
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000104524 (version 109)
Entrez gene 65263
HGNC HGNC:25846
UniProt Q53H96 (UniProt - Evidence at protein level)
neXtProt NX_Q53H96
GeneCards PYCR3
Antibodypedia PYCR3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Enzyme that catalyzes the last step in proline biosynthesis. Proline is synthesized from either glutamate or ornithine; both are converted to pyrroline-5-carboxylate (P5C), and then to proline via pyrroline-5-carboxylate reductases (PYCRs). PYCRL is exclusively linked to the conversion of ornithine to proline.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Oxidoreductase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Amino-acid biosynthesis, Proline biosynthesis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

NADP
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that belongs to the pyrroline-5-carboxylate reductase family of enzymes. Members of this family catalyze the final step in proline biosynthesis, converting pyrroline-5-carboxylate to proline. Glutamate and ornithine are precursors in the synthesis of proline. The protein encoded by this gene is a cytoplasmic enzyme involved in the biosynthesis of proline from ornithine. [provided by RefSeq, Aug 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PYCR3-201
ENSP00000220966
ENST00000220966
A0A0A0MQS1
[Direct mapping] Pyrroline-5-carboxylate reductase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004735 [pyrroline-5-carboxylate reductase activity]
GO:0005829 [cytosol]
GO:0006561 [proline biosynthetic process]
GO:0008652 [cellular amino acid biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0045171 [intercellular bridge]
GO:0055129 [L-proline biosynthetic process]
GO:0072686 [mitotic spindle]
Show all
286 aa
29.9 kDa
No 0
PYCR3-202
ENSP00000366802
ENST00000377579
B5MD87
[Direct mapping] Pyrroline-5-carboxylate reductase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004735 [pyrroline-5-carboxylate reductase activity]
GO:0006561 [proline biosynthetic process]
GO:0055129 [L-proline biosynthetic process]
Show all
137 aa
14.3 kDa
No 0
PYCR3-203
ENSP00000404493
ENST00000433751
Q53H96
[Direct mapping] Pyrroline-5-carboxylate reductase 3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004735 [pyrroline-5-carboxylate reductase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006561 [proline biosynthetic process]
GO:0008652 [cellular amino acid biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0045171 [intercellular bridge]
GO:0055129 [L-proline biosynthetic process]
GO:0072686 [mitotic spindle]
Show all
254 aa
26.4 kDa
No 0
PYCR3-205
ENSP00000478138
ENST00000462036
A0A087WTU2
[Direct mapping] Pyrroline-5-carboxylate reductase 3
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004735 [pyrroline-5-carboxylate reductase activity]
GO:0006561 [proline biosynthetic process]
Show all
59 aa
6.2 kDa
No 0
PYCR3-207
ENSP00000480945
ENST00000495276
Q53H96
[Direct mapping] Pyrroline-5-carboxylate reductase 3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004735 [pyrroline-5-carboxylate reductase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006561 [proline biosynthetic process]
GO:0008652 [cellular amino acid biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0045171 [intercellular bridge]
GO:0055129 [L-proline biosynthetic process]
GO:0072686 [mitotic spindle]
Show all
274 aa
28.7 kDa
No 0

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