HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:201.1 nTPM
HPA Brain:174.3 nTPM
GTEx:201.1 nTPM
FANTOM5:143.9 Scaled Tags Per Million
Pig:94.5 nTPM
Mouse:153.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043236Antibody CAB018600
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 174.3
Sample id Sample description nTPM
Hippocampus
nTPM: 167.2
1898 Male, age 80, left hemisphere 213.8
1855 Male, age 76, left hemisphere 182.1
2529 Female, age 94, left hemisphere 165.1
2148 Female, age 91, left hemisphere 160.8
1911 Female, age 85, right hemisphere 156.0
2621 Female, age 67, right hemisphere 125.1
Dentate gyrus
nTPM: 155.9
2010 Male, age 76, both hemispheres 201.7
2530 Female, age 94, left hemisphere 168.1
1927 Female, age 91, both hemispheres 161.6
2528 Male, age 74, both hemispheres 156.9
2246 Female, age 85, both hemispheres 138.8
2531 Female, age 67, both hemispheres 108.3
Entorhinal gyrus
nTPM: 131.4
2117 Female, age 91, right hemisphere 158.8
1938 Female, age 85, left hemisphere 145.9
2686 Male, age 75, right hemisphere 137.0
1787 Male, age 76, left hemisphere 134.0
2764 Male, age 80, right hemisphere 113.0
2613 Female, age 94, left hemisphere 99.4
Hippocampus, CA1
nTPM: 174.3
2749 Male, age 80, left hemisphere 216.0
1873 Female, age 85, both hemispheres 199.2
2045 Male, age 76, both hemispheres 179.0
2527 Male, age 74, both hemispheres 146.2
2082 Female, age 91, right hemisphere 131.2
Hippocampus, CA2
nTPM: 154.2
1963 Male, age 80, left hemisphere 190.4
1892 Male, age 76, both hemispheres 186.6
2249 Male, age 74, both hemispheres 148.8
2113 Female, age 91, right hemisphere 135.9
1940 Female, age 85, left hemisphere 131.6
2437 Female, age 94, left hemisphere 131.6
Hippocampus, CA3
nTPM: 149.9
2137 Male, age 80, left hemisphere 175.3
1867 Male, age 76, both hemispheres 170.6
1891 Female, age 85, both hemispheres 166.0
2861 Female, age 67, both hemispheres 139.5
2620 Female, age 94, left hemisphere 132.8
2436 Male, age 74, both hemispheres 115.3
Parahippocampal cortex
nTPM: 124.3
1850 Male, age 80, both hemispheres 147.0
2018 Male, age 76, both hemispheres 140.9
1933 Female, age 85, both hemispheres 138.0
1990 Female, age 91, right hemisphere 136.7
2692 Male, age 74, both hemispheres 130.6
2250 Female, age 67, right hemisphere 121.9
2245 Female, age 91, both hemispheres 119.8
2693 Female, age 94, both hemispheres 108.5
2622 Female, age 67, right hemisphere 102.3
2532 Female, age 72, left hemisphere 97.3
Perirhinal gyrus
nTPM: 130.0
1847 Female, age 91, left hemisphere 150.5
1841 Female, age 85, right hemisphere 140.1
1794 Male, age 80, right hemisphere 130.3
2521 Female, age 94, right hemisphere 115.0
2848 Male, age 76, right hemisphere 114.0
Subiculum
nTPM: 141.3
2729 Female, age 91, right hemisphere 171.6
1901 Male, age 80, both hemispheres 155.1
2042 Male, age 76, both hemispheres 145.0
1977 Female, age 85, both hemispheres 142.0
2438 Female, age 94, left hemisphere 118.2
2619 Male, age 74, both hemispheres 115.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 201.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 201.1
Samples: 197

Max nTPM: 471.4
Min nTPM: 87.5
Std nTPM: 49.7
Median nTPM: 190.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 471.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 377.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 368.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 365.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 349.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 324.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 318.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 301.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 300.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 294.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 291.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 143.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.9
FF:10153-102I9 76 years, female 156.0
FF:10169-103B7 60 years, female 131.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 94.5
Pig sample Sample description nTPM
Subiculum
nTPM: 91.7
Samples: 4

Max nTPM: 119.2
Min nTPM: 79.8
Sample A Female 119.2
Sample B Female 87.9
Sample C Male 80.0
Sample D Male 79.8
Dorsal hippocampus
nTPM: 94.6
Samples: 4

Max nTPM: 122.4
Min nTPM: 72.4
Sample A Female 122.4
Sample B Female 93.1
Sample C Male 90.3
Sample D Male 72.4
Entorhinal cortex
nTPM: 91.4
Samples: 4

Max nTPM: 108.2
Min nTPM: 73.3
Sample A Female 91.1
Sample B Female 108.2
Sample C Male 92.8
Sample D Male 73.3
Ventral hippocampus
nTPM: 84.9
Samples: 4

Max nTPM: 90.9
Min nTPM: 72.4
Sample A Female 86.7
Sample B Female 72.4
Sample C Male 89.5
Sample D Male 90.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 153.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 153.5
Samples: 4

Max nTPM: 161.5
Min nTPM: 144.2
Sample A Male 149.5
Sample B Male 161.5
Sample C Female 144.2
Sample D Female 158.9
Hippocampal formation
nTPM: 137.3
Samples: 4

Max nTPM: 149.5
Min nTPM: 122.5
Sample A Male 137.5
Sample B Male 139.5
Sample C Female 149.5
Sample D Female 122.5

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