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NEFM
HPA
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  • NEFM
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NEFM
Synonyms NEF3, NF-M, NFM
Gene descriptioni

Full gene name according to HGNC.

Neurofilament medium chain
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband p21.2
Chromosome location (bp) 24913758 - 24919098
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000104722 (version 109)
Entrez gene 4741
HGNC HGNC:7734
UniProt P07197 (UniProt - Evidence at protein level)
neXtProt NX_P07197
GeneCards NEFM
Antibodypedia NEFM antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Neurofilaments usually contain three intermediate filament proteins: NEFL, NEFM, and NEFH which are involved in the maintenance of neuronal caliber. May additionally cooperate with the neuronal intermediate filament proteins PRPH and INA to form neuronal filamentous networks (By similarity).... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Neurofilaments are type IV intermediate filament heteropolymers composed of light, medium, and heavy chains. Neurofilaments comprise the axoskeleton and functionally maintain neuronal caliber. They may also play a role in intracellular transport to axons and dendrites. This gene encodes the medium neurofilament protein. This protein is commonly used as a biomarker of neuronal damage. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Oct 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NEFM-201
ENSP00000221166
ENST00000221166
P07197
[Direct mapping] Neurofilament medium polypeptide
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0008017 [microtubule binding]
GO:0030424 [axon]
GO:0033693 [neurofilament bundle assembly]
GO:0042995 [cell projection]
GO:0045109 [intermediate filament organization]
GO:0045111 [intermediate filament cytoskeleton]
GO:0097418 [neurofibrillary tangle]
GO:0099160 [postsynaptic intermediate filament cytoskeleton]
Show all
916 aa
102.5 kDa
No 0
NEFM-202
ENSP00000412295
ENST00000433454
P07197
[Direct mapping] Neurofilament medium polypeptide
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0008017 [microtubule binding]
GO:0030424 [axon]
GO:0033693 [neurofilament bundle assembly]
GO:0042995 [cell projection]
GO:0045109 [intermediate filament organization]
GO:0045111 [intermediate filament cytoskeleton]
GO:0097418 [neurofibrillary tangle]
GO:0099160 [postsynaptic intermediate filament cytoskeleton]
Show all
540 aa
59.5 kDa
No 0
NEFM-203
ENSP00000410137
ENST00000437366
E7ESP9
[Direct mapping] Neurofilament medium polypeptide
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0030424 [axon]
GO:0033693 [neurofilament bundle assembly]
GO:0042995 [cell projection]
GO:0045111 [intermediate filament cytoskeleton]
Show all
877 aa
98.4 kDa
No 0
NEFM-204
ENSP00000427872
ENST00000518131
E7EMV2
[Direct mapping] Neurofilament medium polypeptide
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005882 [intermediate filament]
GO:0005883 [neurofilament]
GO:0030424 [axon]
GO:0033693 [neurofilament bundle assembly]
GO:0042995 [cell projection]
GO:0045111 [intermediate filament cytoskeleton]
Show all
698 aa
78.9 kDa
No 0

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