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BNIP3L
HPA
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  • BNIP3L
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BNIP3L
Synonyms BNIP3a, Nix
Gene descriptioni

Full gene name according to HGNC.

BCL2 interacting protein 3 like
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband p21.2
Chromosome location (bp) 26383054 - 26505636
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000104765 (version 109)
Entrez gene 665
HGNC HGNC:1085
UniProt O60238 (UniProt - Evidence at protein level)
neXtProt NX_O60238
GeneCards BNIP3L
Antibodypedia BNIP3L antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Induces apoptosis. Interacts with viral and cellular anti-apoptosis proteins. Can overcome the suppressors BCL-2 and BCL-XL, although high levels of BCL-XL expression will inhibit apoptosis. Inhibits apoptosis induced by BNIP3. Involved in mitochondrial quality control via its interaction with SPATA18/MIEAP: in response to mitochondrial damage, participates in mitochondrial protein catabolic process (also named MALM) leading to the degradation of damaged proteins inside mitochondria. The physical interaction of SPATA18/MIEAP, BNIP3 and BNIP3L/NIX at the mitochondrial outer membrane regulates the opening of a pore in the mitochondrial double membrane in order to mediate the translocation of lysosomal proteins from the cytoplasm to the mitochondrial matrix. May function as a tumor suppressor.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Apoptosis, Host-virus interaction
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that belongs to the pro-apoptotic subfamily within the Bcl-2 family of proteins. The encoded protein binds to Bcl-2 and possesses the BH3 domain. The protein directly targets mitochondria and causes apoptotic changes, including loss of membrane potential and the release of cytochrome c. [provided by RefSeq, Feb 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BNIP3L-201
ENSP00000370003
ENST00000380629
O60238
[Direct mapping] BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
Show all
Q6IBV1
[Target identity:100%; Query identity:100%] BCL2/adenovirus E1B 19kDa interacting protein 3-like; BNIP3L protein; cDNA FLJ75547, highly similar to Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like (BNIP3L), mRNA
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005521 [lamin binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005739 [mitochondrion]
GO:0005740 [mitochondrial envelope]
GO:0005741 [mitochondrial outer membrane]
GO:0005783 [endoplasmic reticulum]
GO:0006915 [apoptotic process]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016239 [positive regulation of macroautophagy]
GO:0016607 [nuclear speck]
GO:0019222 [regulation of metabolic process]
GO:0035694 [mitochondrial protein catabolic process]
GO:0042802 [identical protein binding]
GO:0042803 [protein homodimerization activity]
GO:0043065 [positive regulation of apoptotic process]
GO:0043066 [negative regulation of apoptotic process]
GO:0043067 [regulation of programmed cell death]
GO:0051607 [defense response to virus]
GO:0060548 [negative regulation of cell death]
GO:0071456 [cellular response to hypoxia]
GO:0097345 [mitochondrial outer membrane permeabilization]
GO:1903146 [regulation of autophagy of mitochondrion]
GO:1903214 [regulation of protein targeting to mitochondrion]
Show all
219 aa
23.9 kDa
No 1
BNIP3L-202
ENSP00000429851
ENST00000518611
O60238
[Direct mapping] BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005521 [lamin binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005739 [mitochondrion]
GO:0005740 [mitochondrial envelope]
GO:0005741 [mitochondrial outer membrane]
GO:0005783 [endoplasmic reticulum]
GO:0006915 [apoptotic process]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016239 [positive regulation of macroautophagy]
GO:0016607 [nuclear speck]
GO:0019222 [regulation of metabolic process]
GO:0035694 [mitochondrial protein catabolic process]
GO:0042802 [identical protein binding]
GO:0042803 [protein homodimerization activity]
GO:0043065 [positive regulation of apoptotic process]
GO:0043066 [negative regulation of apoptotic process]
GO:0043067 [regulation of programmed cell death]
GO:0051607 [defense response to virus]
GO:0060548 [negative regulation of cell death]
GO:0071456 [cellular response to hypoxia]
GO:0097345 [mitochondrial outer membrane permeabilization]
Show all
179 aa
19.6 kDa
No 1
BNIP3L-204
ENSP00000428597
ENST00000520409
O60238
[Direct mapping] BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005521 [lamin binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005739 [mitochondrion]
GO:0005740 [mitochondrial envelope]
GO:0005741 [mitochondrial outer membrane]
GO:0005783 [endoplasmic reticulum]
GO:0006915 [apoptotic process]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016239 [positive regulation of macroautophagy]
GO:0016607 [nuclear speck]
GO:0019222 [regulation of metabolic process]
GO:0035694 [mitochondrial protein catabolic process]
GO:0042802 [identical protein binding]
GO:0042803 [protein homodimerization activity]
GO:0043065 [positive regulation of apoptotic process]
GO:0043066 [negative regulation of apoptotic process]
GO:0043067 [regulation of programmed cell death]
GO:0051607 [defense response to virus]
GO:0060548 [negative regulation of cell death]
GO:0071456 [cellular response to hypoxia]
GO:0097345 [mitochondrial outer membrane permeabilization]
Show all
179 aa
19.6 kDa
No 1
BNIP3L-206
ENSP00000429698
ENST00000523515
O60238
[Direct mapping] BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005521 [lamin binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005739 [mitochondrion]
GO:0005740 [mitochondrial envelope]
GO:0005741 [mitochondrial outer membrane]
GO:0005783 [endoplasmic reticulum]
GO:0006915 [apoptotic process]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016239 [positive regulation of macroautophagy]
GO:0016607 [nuclear speck]
GO:0019222 [regulation of metabolic process]
GO:0035694 [mitochondrial protein catabolic process]
GO:0042802 [identical protein binding]
GO:0042803 [protein homodimerization activity]
GO:0043065 [positive regulation of apoptotic process]
GO:0043066 [negative regulation of apoptotic process]
GO:0043067 [regulation of programmed cell death]
GO:0051607 [defense response to virus]
GO:0060548 [negative regulation of cell death]
GO:0071456 [cellular response to hypoxia]
GO:0097345 [mitochondrial outer membrane permeabilization]
Show all
179 aa
19.6 kDa
No 1
BNIP3L-207
ENSP00000429171
ENST00000523949
H0YBC7
[Direct mapping] BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005739 [mitochondrion]
GO:0005740 [mitochondrial envelope]
GO:0006915 [apoptotic process]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016607 [nuclear speck]
GO:0019222 [regulation of metabolic process]
GO:0042802 [identical protein binding]
GO:0043065 [positive regulation of apoptotic process]
Show all
185 aa
20.1 kDa
No 1

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