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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: High
Purkinje cells: Low
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

16.618
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.8 nTPM
HPA Brain:41.9 nTPM
GTEx:61.8 nTPM
FANTOM5:79.7 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:123.2 nTPM
Allen mouse:2.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002907Antibody HPA005835
Purkinje cells MediumLow
Cells in granular layer LowMedium
Cells in molecular layer LowHigh





CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA005835
Cerebellum mean intensity 16.618
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 1.330
Purkinje layer of the cerebellum 16.618
Granular layer of the cerebellum 1.954

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 22.0
2003 Female, age 85, right hemisphere 25.4
2101 Male, age 74, right hemisphere 25.4
1768 Female, age 72, unknown 25.0
2006 Male, age 61, right hemisphere 21.6
1788 Male, age 55, unknown 20.8
1769 Male, age 76, right hemisphere 20.3
2055 Female, age 91, right hemisphere 19.4
1774 Male, age 80, left hemisphere 18.3
Cerebellar nuclei
nTPM: 41.9
2783 Female, age 72, unknown 62.1
2177 Female, age 85, both hemispheres 48.6
2882 Male, age 76, left hemisphere 43.6
2005 Male, age 80, left hemisphere 42.8
1966 Female, age 91, left hemisphere 40.8
1871 Male, age 74, unknown 36.6
2175 Male, age 61, right hemisphere 36.3
1879 Male, age 55, unknown 34.4
2318 Male, age 74, left hemisphere 31.7
Flocculonodular lobe
nTPM: 18.3
1792 Male, age 74, unknown 22.5
1765 Male, age 55, unknown 20.1
1771 Male, age 80, left hemisphere 19.1
2176 Female, age 91, right hemisphere 18.4
1767 Male, age 76, left hemisphere 17.4
1835 Female, age 85, right hemisphere 16.3
2004 Male, age 61, right hemisphere 14.3
Vermis
nTPM: 20.1
1751 Male, age 74, right hemisphere 24.9
1766 Male, age 55, unknown 24.2
1928 Female, age 72, unknown 21.5
1778 Female, age 91, left hemisphere 21.2
1770 Male, age 76, left hemisphere 20.9
2834 Male, age 80, left hemisphere 20.3
1825 Male, age 74, unknown 16.6
2460 Male, age 61, both hemispheres 16.4
1988 Female, age 85, left hemisphere 14.7

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.8
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 61.8
Samples: 215

Max nTPM: 141.9
Min nTPM: 24.8
Std nTPM: 15.3
Median nTPM: 59.7
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 141.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 120.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 118.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 104.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 103.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 101.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 98.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 96.8
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 94.5
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 91.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 91.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 89.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 87.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 87.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 85.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 84.7
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 84.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 83.6
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 81.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 81.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 78.8
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 78.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 78.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 77.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 76.9
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 76.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 76.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 75.7
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 75.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 74.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 74.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 74.3
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 74.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 74.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 73.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 73.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 73.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 73.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 72.9
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 72.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 72.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 72.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 71.7
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 71.1
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 70.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 70.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 69.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 69.7
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 69.7
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 69.6
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 69.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 69.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 69.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 68.0
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 67.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 67.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 67.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 67.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 67.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 66.8
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 66.5
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 66.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 66.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 66.2
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 66.1
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 66.0
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 65.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 65.7
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 65.6
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 65.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 64.8
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 64.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 64.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 64.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 64.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 64.3
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 64.3
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 64.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 63.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 63.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 63.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 63.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 63.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 63.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 63.1
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 63.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 62.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 62.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 62.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 62.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 61.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 61.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 61.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 61.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 61.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 61.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 61.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 61.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 60.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 60.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 60.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 60.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 60.1
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 59.9
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 59.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 59.9
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 59.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 59.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 59.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 59.3
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 59.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 59.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 59.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 58.6
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 58.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 58.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 58.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 58.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 58.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 58.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 58.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 57.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 56.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 56.8
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 56.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 56.6
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 56.2
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 56.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 55.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 55.8
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 55.8
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 55.5
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 55.3
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 55.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 55.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 55.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 55.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 54.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 54.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 54.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 54.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 54.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 53.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 53.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 53.6
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 53.5
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 53.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 52.8
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 52.8
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 52.7
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 52.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 52.6
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 52.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 52.5
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 52.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 52.4
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 52.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 52.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 52.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 52.3
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 52.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 52.2
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 52.0
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 52.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 51.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 51.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 51.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 51.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 51.4
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 51.4
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 51.4
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 51.2
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 51.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 51.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 51.1
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 50.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 50.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 50.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 50.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 50.3
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 50.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 49.9
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 49.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 49.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 49.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 49.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 49.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 49.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 48.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 48.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 48.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 48.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 47.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 47.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 47.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 46.9
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 46.8
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 46.3
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 45.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 45.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 45.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 45.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 44.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 43.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 43.5
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 40.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 40.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 37.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 37.4
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 37.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 36.9
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 35.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 35.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 33.2
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 24.8
Show allShow less
Brain - Cerebellum
Average nTPM: 61.6
Samples: 241

Max nTPM: 122.0
Min nTPM: 32.5
Std nTPM: 12.1
Median nTPM: 60.0
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 122.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 117.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 101.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 98.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 96.9
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 96.4
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 87.7
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 86.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 85.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 85.6
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 83.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 82.7
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 82.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 82.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 82.1
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 80.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 80.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 78.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 78.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 78.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 78.0
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 77.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 77.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 76.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 76.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 75.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 74.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 74.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 73.8
GTEX-144GL-2926-SM-5O99F 50-59 years, male 73.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 73.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 72.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 72.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 72.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 72.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 72.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 71.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 71.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 71.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 70.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 70.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 70.3
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 70.2
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 70.0
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 69.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 69.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 68.8
GTEX-11EI6-2926-SM-5985U 60-69 years, male 68.7
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 68.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 68.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 68.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 68.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 68.2
GTEX-1192X-3226-SM-5987D 50-59 years, male 67.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 67.9
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 67.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 67.7
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 67.4
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 67.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 67.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 67.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 67.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 67.1
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 67.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 66.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 66.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 66.3
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 65.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 65.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 65.7
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 65.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 65.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 65.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 65.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 65.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 65.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 65.0
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 65.0
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 64.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 64.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 64.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 64.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 64.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 64.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 64.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 64.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 63.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 63.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 63.6
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 63.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 63.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 63.4
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 63.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 63.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 63.0
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 62.9
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 62.6
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 62.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 62.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 62.2
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 62.2
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 62.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 61.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 61.2
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 61.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 61.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 61.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 61.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 61.0
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 60.9
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 60.8
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 60.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 60.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 60.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 60.6
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 60.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 60.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 60.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 60.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 60.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 60.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 60.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 59.9
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 59.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 59.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 59.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 59.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 59.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 59.4
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 59.3
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 59.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 59.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 59.1
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 58.8
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 58.8
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 58.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 58.4
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 58.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 58.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 58.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 57.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 57.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 57.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 57.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 57.3
GTEX-14ABY-3026-SM-664NE 50-59 years, male 57.2
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 57.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 57.1
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 57.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 56.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 56.9
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 56.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 56.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 56.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 56.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 56.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 56.3
GTEX-1B933-3026-SM-731DB 50-59 years, female 56.2
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 56.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 56.1
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 56.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 56.0
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 55.8
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 55.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 55.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 55.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 55.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 55.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 54.8
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 54.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 54.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 54.6
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 54.5
GTEX-17EVP-2926-SM-793BU 40-49 years, male 54.4
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 54.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 54.3
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 54.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 54.3
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 54.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 54.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 54.1
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 54.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 53.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 53.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 53.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 53.8
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 53.4
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 53.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 53.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 53.2
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 53.0
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 53.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 52.8
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 52.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 52.7
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 52.7
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 52.7
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 52.4
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 52.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 52.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 52.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 52.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 51.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 51.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 51.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 51.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 51.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 51.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 51.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 50.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 50.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 50.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 50.1
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 50.0
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 49.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 49.7
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 49.6
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 49.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 48.7
GTEX-11DYG-2926-SM-5H132 60-69 years, male 48.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 48.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 47.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 47.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 47.3
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 46.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 46.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 46.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 45.7
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 45.2
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 45.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 44.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 44.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 44.0
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 43.9
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 43.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 42.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 42.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 38.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 38.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 35.4
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 32.5
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 79.7
FF:10083-102B2 22-68 years, mixed 83.2
FF:10166-103B4 76 years, female 76.3

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 14.0
Samples: 4

Max nTPM: 20.9
Min nTPM: 9.1
Sample A Female 20.9
Sample B Female 11.2
Sample C Male 14.8
Sample D Male 9.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 123.2
Samples: 4

Max nTPM: 128.9
Min nTPM: 114.0
Sample A Male 114.0
Sample B Male 122.5
Sample C Female 127.5
Sample D Female 128.9

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 2.7
69671863 Antisense, RP_050428_02_E05, Mouse strain C57BL/6J (56 days, male) 2.7

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