HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:453.0 nTPM
HPA Brain:323.5 nTPM
GTEx:453.0 nTPM
FANTOM5:340.0 Scaled Tags Per Million
Pig:447.0 nTPM
Mouse:356.7 nTPM
Allen mouse:17.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 323.5
Sample id Sample description nTPM
Hippocampus
nTPM: 294.5
1898 Male, age 80, left hemisphere 365.4
2621 Female, age 67, right hemisphere 359.2
2529 Female, age 94, left hemisphere 284.2
1911 Female, age 85, right hemisphere 281.8
2148 Female, age 91, left hemisphere 261.3
1855 Male, age 76, left hemisphere 215.0
Dentate gyrus
nTPM: 271.8
2530 Female, age 94, left hemisphere 357.8
1927 Female, age 91, both hemispheres 351.8
2010 Male, age 76, both hemispheres 266.8
2531 Female, age 67, both hemispheres 246.3
2246 Female, age 85, both hemispheres 219.8
2528 Male, age 74, both hemispheres 188.4
Entorhinal gyrus
nTPM: 323.5
2613 Female, age 94, left hemisphere 386.3
2764 Male, age 80, right hemisphere 363.4
2686 Male, age 75, right hemisphere 356.0
1938 Female, age 85, left hemisphere 319.3
1787 Male, age 76, left hemisphere 265.1
2117 Female, age 91, right hemisphere 250.6
Hippocampus, CA1
nTPM: 275.3
2749 Male, age 80, left hemisphere 418.6
1873 Female, age 85, both hemispheres 285.8
2527 Male, age 74, both hemispheres 269.3
2045 Male, age 76, both hemispheres 203.8
2082 Female, age 91, right hemisphere 199.0
Hippocampus, CA2
nTPM: 297.8
1963 Male, age 80, left hemisphere 389.3
1892 Male, age 76, both hemispheres 347.2
2437 Female, age 94, left hemisphere 322.3
1940 Female, age 85, left hemisphere 285.0
2249 Male, age 74, both hemispheres 226.9
2113 Female, age 91, right hemisphere 216.0
Hippocampus, CA3
nTPM: 274.8
2861 Female, age 67, both hemispheres 344.6
2137 Male, age 80, left hemisphere 304.0
1867 Male, age 76, both hemispheres 292.4
2620 Female, age 94, left hemisphere 268.1
1891 Female, age 85, both hemispheres 255.0
2436 Male, age 74, both hemispheres 184.9
Parahippocampal cortex
nTPM: 310.4
2622 Female, age 67, right hemisphere 383.2
2245 Female, age 91, both hemispheres 337.2
1990 Female, age 91, right hemisphere 319.4
1850 Male, age 80, both hemispheres 312.6
1933 Female, age 85, both hemispheres 310.8
2693 Female, age 94, both hemispheres 309.9
2692 Male, age 74, both hemispheres 289.6
2018 Male, age 76, both hemispheres 283.0
2532 Female, age 72, left hemisphere 282.9
2250 Female, age 67, right hemisphere 275.9
Perirhinal gyrus
nTPM: 314.8
1794 Male, age 80, right hemisphere 345.3
1847 Female, age 91, left hemisphere 335.9
1841 Female, age 85, right hemisphere 324.7
2521 Female, age 94, right hemisphere 291.2
2848 Male, age 76, right hemisphere 277.2
Subiculum
nTPM: 275.4
1901 Male, age 80, both hemispheres 311.9
2438 Female, age 94, left hemisphere 311.7
2619 Male, age 74, both hemispheres 293.8
1977 Female, age 85, both hemispheres 288.6
2042 Male, age 76, both hemispheres 231.8
2729 Female, age 91, right hemisphere 215.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 453.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 453.0
Samples: 197

Max nTPM: 1074.7
Min nTPM: 132.1
Std nTPM: 173.4
Median nTPM: 431.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1074.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1053.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 934.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 931.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 930.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 857.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 847.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 822.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 791.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 776.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 769.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 340.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 340.0
FF:10169-103B7 60 years, female 362.4
FF:10153-102I9 76 years, female 317.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 447.0
Pig sample Sample description nTPM
Subiculum
nTPM: 351.9
Samples: 4

Max nTPM: 491.6
Min nTPM: 297.3
Sample A Female 491.6
Sample B Female 297.6
Sample C Male 321.0
Sample D Male 297.3
Dorsal hippocampus
nTPM: 376.9
Samples: 4

Max nTPM: 486.2
Min nTPM: 280.7
Sample A Female 486.2
Sample B Female 377.9
Sample C Male 362.6
Sample D Male 280.7
Entorhinal cortex
nTPM: 447.0
Samples: 4

Max nTPM: 496.8
Min nTPM: 375.1
Sample A Female 465.7
Sample B Female 450.2
Sample C Male 496.8
Sample D Male 375.1
Ventral hippocampus
nTPM: 365.6
Samples: 4

Max nTPM: 438.9
Min nTPM: 249.9
Sample A Female 393.9
Sample B Female 249.9
Sample C Male 438.9
Sample D Male 379.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 356.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 356.7
Samples: 4

Max nTPM: 369.4
Min nTPM: 344.9
Sample A Male 369.4
Sample B Male 359.4
Sample C Female 344.9
Sample D Female 352.9
Hippocampal formation
nTPM: 353.8
Samples: 4

Max nTPM: 367.4
Min nTPM: 341.4
Sample A Male 358.7
Sample B Male 341.4
Sample C Female 347.8
Sample D Female 367.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.6
69524404 Antisense, RP_050419_04_C07, Mouse strain C57BL/6J (56 days, male) 17.6

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