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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:176.5 nTPM
HPA Brain:118.3 nTPM
GTEx:176.5 nTPM
FANTOM5:95.1 Scaled Tags Per Million
Pig:41.7 nTPM
Mouse:81.9 nTPM
Allen mouse:7.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057771
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 118.3
1857 Female, age 85, left hemisphere 172.4
2481 Female, age 94, left hemisphere 137.7
2290 Female, age 72, unknown 132.6
1854 Male, age 80, left hemisphere 114.0
2289 Male, age 61, right hemisphere 104.1
2288 Male, age 75, left hemisphere 102.4
2846 Female, age 79, unknown 99.6
1781 Male, age 74, unknown 83.3
Globus pallidus, externus
nTPM: 71.8
2646 Male, age 61, right hemisphere 99.9
1996 Male, age 80, right hemisphere 76.8
2567 Female, age 72, unknown 74.4
2772 Female, age 79, unknown 66.1
2395 Male, age 75, both hemispheres 42.0
Globus pallidus, internus
nTPM: 66.4
2483 Female, age 94, right hemisphere 100.5
1818 Male, age 74, unknown 77.1
2287 Male, age 75, right hemisphere 68.2
2566 Female, age 72, unknown 63.0
2037 Male, age 80, right hemisphere 60.2
2778 Female, age 91, both hemispheres 48.8
2111 Female, age 85, right hemisphere 47.3
Nucleus accumbens
nTPM: 107.9
1806 Female, age 85, left hemisphere 182.3
2286 Male, age 75, left hemisphere 140.7
1783 Male, age 74, unknown 114.9
1856 Female, age 91, right hemisphere 91.9
2698 Female, age 72, unknown 87.5
2391 Female, age 94, left hemisphere 83.5
2824 Male, age 61, right hemisphere 82.6
2732 Male, age 80, right hemisphere 79.9
Nucleus basalis of Meynert
nTPM: 84.9
2569 Male, age 61, both hemispheres 119.1
2484 Female, age 94, left hemisphere 91.3
2393 Male, age 80, right hemisphere 67.0
2821 Male, age 75, both hemispheres 62.3
Nucleus of the diagonal band
nTPM: 94.0
2195 Female, age 85, both hemispheres 115.4
1979 Male, age 74, unknown 101.3
2775 Male, age 80, right hemisphere 94.3
1812 Female, age 91, both hemispheres 85.0
2029 Male, age 61, right hemisphere 74.1
Putamen
nTPM: 98.1
2489 Female, age 72, unknown 122.3
2482 Female, age 94, left hemisphere 118.0
1838 Male, age 80, right hemisphere 105.3
2466 Female, age 79, unknown 105.1
2647 Male, age 75, left hemisphere 85.5
1829 Male, age 74, unknown 79.1
1937 Female, age 91, right hemisphere 71.1
Septal nuclei
nTPM: 95.8
2059 Female, age 85, both hemispheres 155.1
1960 Male, age 74, unknown 116.3
2199 Male, age 80, right hemisphere 88.9
2031 Female, age 72, unknown 85.2
2009 Female, age 91, both hemispheres 77.8
2394 Male, age 61, left hemisphere 74.7
2629 Female, age 94, right hemisphere 72.5
Stria terminalis, bed nucleus
nTPM: 79.1
2201 Male, age 74, unknown 96.4
1974 Female, age 91, both hemispheres 75.9
2486 Female, age 94, both hemispheres 65.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 147.0
Samples: 246

Max nTPM: 440.1
Min nTPM: 34.7
Std nTPM: 74.2
Median nTPM: 130.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 440.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 407.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 376.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 372.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 359.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 345.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 339.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 313.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 310.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 303.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 293.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 279.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 272.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 271.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 270.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 269.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 266.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 264.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 263.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 263.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 263.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 262.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 261.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 253.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 251.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 251.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 250.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 247.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 240.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 235.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 234.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 233.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 233.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 231.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 231.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 229.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 225.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 224.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 223.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 222.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 217.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 211.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 209.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 206.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 205.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 205.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 204.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 204.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 201.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 200.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 199.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 198.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 195.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 191.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 191.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 191.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 189.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 188.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 188.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 187.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 186.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 186.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 185.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 185.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 185.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 184.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 184.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 181.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 181.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 179.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 179.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 178.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 175.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 174.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 173.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 171.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 171.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 169.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 169.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 169.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 168.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 165.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 162.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 160.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 160.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 157.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 156.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 156.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 156.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 155.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 151.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 151.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 151.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 150.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 150.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 149.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 149.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 148.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 146.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 146.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 145.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 144.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 140.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 139.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 139.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 138.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 137.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 136.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 134.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 134.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 133.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 133.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 133.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 132.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 131.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 130.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 129.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 125.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 125.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 124.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 124.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 123.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 122.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 121.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 121.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 120.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 119.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 119.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 118.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 117.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 116.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 116.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 114.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 114.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 113.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 112.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 112.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 111.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 111.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 110.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 110.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 110.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 108.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 107.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 106.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 106.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 106.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 105.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 105.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 104.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 103.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 101.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 101.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 98.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 98.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 98.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 98.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 97.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 97.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 97.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 96.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 96.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 95.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 95.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 94.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 93.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 93.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 92.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 91.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 90.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 90.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 88.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 87.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 85.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 84.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 82.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 81.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 78.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 76.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 75.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 74.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 74.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 74.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 74.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 74.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 73.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 72.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 69.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 69.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 69.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 65.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 64.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 56.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 55.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 51.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 49.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 45.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 44.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 150.5
Samples: 246

Max nTPM: 403.0
Min nTPM: 30.8
Std nTPM: 71.3
Median nTPM: 136.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 403.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 386.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 376.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 349.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 340.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 338.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 335.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 329.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 316.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 312.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 310.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 300.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 300.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 298.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 295.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 295.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 282.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 281.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 278.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 278.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 264.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 260.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 255.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 254.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 252.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 248.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 246.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 246.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 242.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 239.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 237.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 231.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 231.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 222.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 220.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 220.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 218.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 217.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 216.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 216.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 215.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 214.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 208.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 206.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 206.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 204.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 203.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 201.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 196.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 196.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 193.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 192.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 192.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 191.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 190.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 189.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 189.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 189.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 187.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 185.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 184.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 184.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 182.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 182.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 181.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 179.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 178.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 178.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 178.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 176.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 174.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 173.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 173.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 173.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 173.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 167.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 167.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 165.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 164.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 164.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 163.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 163.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 161.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 160.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 160.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 159.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 158.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 158.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 158.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 158.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 157.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 157.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 157.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 154.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 154.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 153.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 153.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 153.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 152.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 151.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 150.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 149.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 148.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 148.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 148.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 148.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 148.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 147.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 146.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 145.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 144.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 144.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 144.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 143.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 143.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 142.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 142.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 142.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 139.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 139.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 138.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 138.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 136.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 136.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 135.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 135.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 135.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 134.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 133.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 132.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 131.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 131.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 131.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 130.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 130.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 129.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 128.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 126.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 124.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 124.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 123.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 122.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 121.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 120.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 120.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 120.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 120.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 120.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 120.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 119.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 119.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 119.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 119.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 118.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 117.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 117.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 117.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 116.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 116.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 115.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 114.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 113.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 112.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 112.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 112.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 111.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 111.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 111.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 111.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 109.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 108.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 108.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 107.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 106.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 106.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 106.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 105.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 104.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 104.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 103.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 103.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 103.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 103.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 102.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 101.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 101.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 100.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 99.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 99.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 99.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 99.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 98.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 97.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 97.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 97.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 97.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 96.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 94.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 92.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 92.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 91.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 91.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 91.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 91.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 89.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 89.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 86.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 86.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 86.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 85.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 84.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 83.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 83.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 83.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 81.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 80.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 79.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 78.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 76.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 76.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 75.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 74.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 73.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 72.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 71.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 70.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 69.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 65.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 63.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 62.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 59.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 56.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 56.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 55.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 54.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 48.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 47.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 47.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 46.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 45.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 37.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 34.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.8
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Brain - Putamen (basal ganglia)
Average nTPM: 176.5
Samples: 205

Max nTPM: 459.5
Min nTPM: 39.0
Std nTPM: 85.2
Median nTPM: 160.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 459.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 449.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 442.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 416.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 395.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 384.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 371.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 360.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 335.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 331.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 331.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 327.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 326.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 325.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 324.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 323.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 305.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 305.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 302.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 297.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 296.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 288.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 286.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 285.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 284.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 284.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 272.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 270.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 267.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 267.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 266.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 263.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 259.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 258.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 257.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 255.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 255.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 252.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 251.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 245.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 242.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 241.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 239.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 237.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 236.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 232.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 232.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 230.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 230.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 228.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 228.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 223.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 222.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 222.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 220.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 219.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 217.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 217.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 216.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 214.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 213.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 210.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 209.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 209.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 209.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 207.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 207.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 201.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 200.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 197.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 197.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 195.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 195.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 194.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 190.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 189.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 189.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 187.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 186.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 186.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 185.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 185.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 184.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 184.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 183.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 180.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 180.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 178.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 177.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 176.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 174.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 174.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 173.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 172.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 170.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 169.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 165.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 164.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 162.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 162.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 161.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 161.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 160.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 158.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 158.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 156.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 154.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 154.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 153.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 153.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 152.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 152.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 151.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 150.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 150.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 150.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 148.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 147.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 147.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 146.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 143.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 142.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 142.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 142.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 141.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 140.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 139.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 137.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 134.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 134.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 134.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 134.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 134.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 133.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 132.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 131.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 128.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 126.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 126.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 125.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 124.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 123.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 123.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 121.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 119.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 118.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 118.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 117.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 116.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 114.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 114.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 113.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 112.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 110.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 109.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 108.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 107.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 106.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 105.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 105.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 100.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 100.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 100.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 100.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 100.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 97.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 97.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 97.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 97.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 92.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 92.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 91.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 90.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 89.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 89.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 89.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 85.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 85.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 82.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 81.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 80.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 80.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 77.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 77.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 77.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 74.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 74.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 74.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 74.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 72.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 71.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 69.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 69.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 67.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 67.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 64.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 62.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 59.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 57.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 54.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 52.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 42.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

95.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 73.4
FF:10164-103B2 76 years, female 73.4
Nucleus accumbens
Scaled Tags Per Million: 86.0
FF:10037-101F1 23-56 years, mixed 86.0
Putamen
Scaled Tags Per Million: 95.1
FF:10176-103C5 60 years, female 95.1
Globus pallidus
Scaled Tags Per Million: 26.0
FF:10161-103A8 76 years, female 27.8
FF:10175-103C4 60 years, female 24.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.7
Pig sample Sample description nTPM
Caudate
nTPM: 30.6
Samples: 4

Max nTPM: 35.0
Min nTPM: 25.9
Sample A Female 27.6
Sample B Female 34.0
Sample C Male 35.0
Sample D Male 25.9
Putamen
nTPM: 28.7
Samples: 4

Max nTPM: 32.4
Min nTPM: 25.7
Sample A Female 32.4
Sample B Female 25.7
Sample C Male 29.9
Sample D Male 26.8
Septum
nTPM: 41.8
Samples: 4

Max nTPM: 54.2
Min nTPM: 33.5
Sample A Female 40.0
Sample B Female 39.3
Sample C Male 54.2
Sample D Male 33.5
Ventral pallidum
nTPM: 39.3
Samples: 4

Max nTPM: 62.0
Min nTPM: 28.4
Sample A Female 33.6
Sample B Female 33.3
Sample C Male 62.0
Sample D Male 28.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 45.9
Samples: 4

Max nTPM: 59.8
Min nTPM: 35.9
Sample A Male 35.9
Sample B Male 39.9
Sample C Female 48.0
Sample D Female 59.8
Septum
nTPM: 65.2
Samples: 4

Max nTPM: 87.1
Min nTPM: 53.2
Sample A Male 87.1
Sample B Male 53.2
Sample C Female 67.1
Sample D Female 53.3
Ventral forebrain
nTPM: 81.9
Samples: 4

Max nTPM: 91.9
Min nTPM: 76.3
Sample A Male 76.3
Sample B Male 78.1
Sample C Female 91.9
Sample D Female 81.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.6
71717155 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 4.6
70228328 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 3.0
Pallidum
Expression energy: 7.5
71717155 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 7.5
70228328 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 4.1

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