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OLFM2
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  • OLFM2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:147.0 nTPM
FANTOM5:73.4 Scaled Tags Per Million
Pig:30.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057771
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 147.0
Samples: 246

Max nTPM: 440.1
Min nTPM: 34.7
Std nTPM: 74.2
Median nTPM: 130.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 440.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 407.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 376.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 372.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 359.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 345.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 339.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 313.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 310.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 303.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 293.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 279.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 272.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 271.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 270.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 269.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 266.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 264.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 263.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 263.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 263.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 262.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 261.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 253.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 251.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 251.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 250.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 247.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 240.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 235.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 234.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 233.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 233.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 231.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 231.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 229.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 225.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 224.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 223.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 222.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 217.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 211.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 209.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 206.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 205.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 205.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 204.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 204.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 201.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 200.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 199.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 198.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 195.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 191.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 191.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 191.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 189.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 188.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 188.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 187.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 186.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 186.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 185.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 185.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 185.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 184.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 184.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 181.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 181.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 179.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 179.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 178.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 175.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 174.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 173.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 171.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 171.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 169.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 169.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 169.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 168.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 165.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 162.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 160.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 160.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 157.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 156.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 156.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 156.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 155.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 151.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 151.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 151.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 150.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 150.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 149.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 149.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 148.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 146.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 146.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 145.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 144.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 140.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 139.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 139.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 138.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 137.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 136.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 134.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 134.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 133.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 133.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 133.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 132.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 131.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 130.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 129.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 125.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 125.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 124.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 124.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 123.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 122.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 121.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 121.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 120.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 119.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 119.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 118.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 117.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 116.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 116.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 114.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 114.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 113.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 112.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 112.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 111.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 111.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 110.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 110.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 110.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 108.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 107.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 106.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 106.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 106.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 105.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 105.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 104.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 103.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 101.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 101.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 98.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 98.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 98.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 98.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 97.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 97.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 97.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 96.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 96.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 95.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 95.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 94.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 93.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 93.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 92.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 91.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 90.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 90.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 88.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 87.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 85.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 84.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 82.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 81.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 78.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 76.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 75.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 74.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 74.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 74.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 74.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 74.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 73.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 72.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 69.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 69.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 69.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 65.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 64.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 56.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 55.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 51.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 49.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 45.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 44.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

73.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 73.4
FF:10164-103B2 76 years, female 73.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.6
Pig sample Sample description nTPM
Caudate
nTPM: 30.6
Samples: 4

Max nTPM: 35.0
Min nTPM: 25.9
Sample A Female 27.6
Sample B Female 34.0
Sample C Male 35.0
Sample D Male 25.9

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