We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EPHX3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • EPHX3
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:35.5 nTPM
GTEx:35.5 nTPM
FANTOM5:3.6 Scaled Tags Per Million

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012842
Squamous epithelial cells Medium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 35.5
Samples: 156

Max nTPM: 134.7
Min nTPM: 0.1
Std nTPM: 32.5
Median nTPM: 31.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 134.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 120.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 116.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 113.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 110.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 109.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 103.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 101.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 101.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 88.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 86.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 84.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 82.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 81.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 78.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 77.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 75.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 75.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 75.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 74.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 73.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 69.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 69.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 69.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 68.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 67.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 66.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 66.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 65.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 64.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 63.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 63.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 62.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 62.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 60.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 59.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 59.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 59.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 58.8
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 58.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 57.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 57.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 56.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 56.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 55.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 55.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 54.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 53.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 53.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 52.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 50.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 50.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 50.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 48.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 47.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 47.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 46.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 45.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 44.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 43.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 43.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 43.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 43.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 42.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 41.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 40.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 40.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 40.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 40.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 38.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 37.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 37.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 36.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 36.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 36.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 35.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 35.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 32.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 31.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 31.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 30.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 27.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 26.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 25.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 25.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 25.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 22.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 22.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 22.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 21.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 20.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 19.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 19.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 18.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 18.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 17.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 15.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 14.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 12.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 12.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 10.7
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 8.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 7.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 7.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 7.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 7.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 6.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 5.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 5.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 4.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 4.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 4.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 4.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 3.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 3.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 3.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 3.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 2.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 2.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1.9
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 0.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 0.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 0.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 0.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 0.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 0.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 0.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 0.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 0.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 0.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 0.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 0.1
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 3.6
FF:10204-103F6 68 years, female 3.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org