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RPS16
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  • RPS16
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:811.0 nTPM
FANTOM5:277.5 Scaled Tags Per Million
Pig:0.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA064222
Glial cells Low
Neuronal cells High

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

811.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 811.0
Samples: 246

Max nTPM: 1948.5
Min nTPM: 269.9
Std nTPM: 229.0
Median nTPM: 795.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1948.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1712.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1585.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1521.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1444.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1406.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1383.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1362.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1308.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1284.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1228.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1219.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1218.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1211.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1180.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1163.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1160.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1137.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1128.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1124.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1112.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1112.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1090.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1069.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1068.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1068.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1035.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1026.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1026.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1025.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1024.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1017.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1011.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1009.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1007.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1007.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1005.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1002.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 998.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 998.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 998.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 990.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 979.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 978.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 978.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 978.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 962.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 960.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 959.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 957.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 957.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 954.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 951.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 950.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 947.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 940.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 938.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 936.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 935.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 927.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 921.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 921.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 920.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 919.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 914.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 909.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 908.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 907.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 906.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 902.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 899.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 898.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 898.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 894.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 893.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 889.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 887.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 884.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 883.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 881.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 879.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 872.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 870.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 865.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 863.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 854.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 853.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 847.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 844.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 840.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 840.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 839.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 838.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 837.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 832.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 830.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 828.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 828.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 827.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 827.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 827.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 826.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 826.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 826.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 821.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 821.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 820.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 819.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 816.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 813.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 812.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 811.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 809.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 809.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 808.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 807.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 807.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 805.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 804.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 802.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 801.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 797.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 795.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 795.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 794.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 792.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 792.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 789.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 789.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 787.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 777.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 776.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 773.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 771.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 767.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 767.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 767.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 766.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 763.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 763.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 762.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 759.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 759.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 752.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 749.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 744.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 740.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 739.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 739.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 728.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 727.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 725.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 717.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 715.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 714.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 714.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 713.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 711.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 708.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 706.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 706.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 705.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 703.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 702.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 702.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 701.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 700.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 698.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 698.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 693.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 692.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 690.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 690.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 689.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 687.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 687.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 686.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 683.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 680.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 675.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 674.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 672.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 669.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 662.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 660.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 659.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 654.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 652.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 652.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 647.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 641.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 638.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 635.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 631.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 626.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 625.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 623.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 621.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 619.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 618.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 617.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 616.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 614.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 612.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 611.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 609.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 608.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 605.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 603.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 603.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 598.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 597.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 593.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 592.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 588.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 588.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 582.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 578.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 578.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 566.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 561.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 559.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 556.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 554.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 544.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 543.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 543.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 542.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 541.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 530.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 522.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 521.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 515.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 512.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 487.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 483.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 482.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 470.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 462.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 453.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 444.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 426.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 380.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 356.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 355.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 269.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

277.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 277.5
FF:10164-103B2 76 years, female 277.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Caudate
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

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