We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GPI
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • GPI
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:117.7 nTPM
GTEx:117.7 nTPM
FANTOM5:215.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA024305Antibody HPA052171Antibody CAB018655Antibody CAB040563Antibody CAB080077
Squamous epithelial cells Not detectedMediumNot detectedMediumMedium










VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 117.7
Samples: 156

Max nTPM: 335.2
Min nTPM: 57.9
Std nTPM: 46.8
Median nTPM: 106.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 335.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 280.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 269.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 256.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 225.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 224.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 210.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 202.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 198.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 198.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 196.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 190.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 187.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 186.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 186.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 182.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 175.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 174.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 172.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 171.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 167.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 166.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 159.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 157.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 157.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 155.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 155.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 154.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 154.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 153.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 151.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 146.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 146.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 145.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 144.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 143.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 143.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 142.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 140.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 138.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 137.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 134.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 132.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 131.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 130.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 129.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 129.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 129.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 128.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 128.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 127.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 127.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 127.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 125.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 125.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 124.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 122.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 121.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 121.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 120.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 118.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 117.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 117.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 117.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 116.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 116.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 113.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 113.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 113.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 112.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 112.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 110.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 110.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 109.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 108.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 107.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 107.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 106.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 106.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 106.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 106.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 103.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 103.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 102.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 101.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 101.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 101.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 100.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 100.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 100.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 100.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 100.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 99.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 98.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 98.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 98.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 97.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 96.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 95.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 94.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 94.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 93.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 93.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 89.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 89.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 89.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 89.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 88.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 87.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 87.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 87.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 87.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 87.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 87.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 87.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 85.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 83.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 82.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 82.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 81.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 81.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 81.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 81.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 80.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 79.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 79.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 79.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 78.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 78.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 76.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 76.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 75.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 74.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 74.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 72.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 72.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 71.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 70.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 70.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 69.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 68.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 68.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 68.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 68.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 68.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 67.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 67.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 65.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 65.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 64.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 64.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 61.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 59.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 59.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 58.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 57.9
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

215.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 215.0
FF:10204-103F6 68 years, female 215.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org