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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:281.2 nTPM
HPA Brain:435.5 nTPM
GTEx:281.2 nTPM
FANTOM5:578.0 Scaled Tags Per Million
Pig:572.7 nTPM
Mouse:578.3 nTPM
Allen mouse:9.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012800Antibody CAB020812
Glial cells LowMedium
Neuronal cells MediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

435.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 293.7
2846 Female, age 79, unknown 364.8
2290 Female, age 72, unknown 355.2
1857 Female, age 85, left hemisphere 346.9
1781 Male, age 74, unknown 325.2
2288 Male, age 75, left hemisphere 277.8
1854 Male, age 80, left hemisphere 275.2
2289 Male, age 61, right hemisphere 220.3
2481 Female, age 94, left hemisphere 184.2
Globus pallidus, externus
nTPM: 193.0
2772 Female, age 79, unknown 241.4
2395 Male, age 75, both hemispheres 220.9
2646 Male, age 61, right hemisphere 192.1
1996 Male, age 80, right hemisphere 156.2
2567 Female, age 72, unknown 154.3
Globus pallidus, internus
nTPM: 167.2
2287 Male, age 75, right hemisphere 245.8
1818 Male, age 74, unknown 187.5
2566 Female, age 72, unknown 174.4
2778 Female, age 91, both hemispheres 157.0
2483 Female, age 94, right hemisphere 151.9
2037 Male, age 80, right hemisphere 144.0
2111 Female, age 85, right hemisphere 110.0
Nucleus accumbens
nTPM: 305.2
1856 Female, age 91, right hemisphere 476.8
1783 Male, age 74, unknown 358.2
2698 Female, age 72, unknown 343.5
1806 Female, age 85, left hemisphere 337.5
2286 Male, age 75, left hemisphere 290.4
2824 Male, age 61, right hemisphere 283.2
2732 Male, age 80, right hemisphere 186.9
2391 Female, age 94, left hemisphere 164.8
Nucleus basalis of Meynert
nTPM: 235.9
2821 Male, age 75, both hemispheres 328.5
2484 Female, age 94, left hemisphere 218.1
2393 Male, age 80, right hemisphere 214.3
2569 Male, age 61, both hemispheres 182.7
Nucleus of the diagonal band
nTPM: 435.5
1812 Female, age 91, both hemispheres 523.8
2775 Male, age 80, right hemisphere 487.2
2195 Female, age 85, both hemispheres 453.0
2029 Male, age 61, right hemisphere 448.0
1979 Male, age 74, unknown 265.4
Putamen
nTPM: 272.8
1937 Female, age 91, right hemisphere 349.0
1838 Male, age 80, right hemisphere 314.2
2466 Female, age 79, unknown 311.7
2647 Male, age 75, left hemisphere 270.1
1829 Male, age 74, unknown 256.1
2489 Female, age 72, unknown 215.5
2482 Female, age 94, left hemisphere 193.2
Septal nuclei
nTPM: 358.8
1960 Male, age 74, unknown 487.9
2031 Female, age 72, unknown 467.2
2629 Female, age 94, right hemisphere 415.4
2009 Female, age 91, both hemispheres 406.0
2059 Female, age 85, both hemispheres 305.0
2394 Male, age 61, left hemisphere 243.3
2199 Male, age 80, right hemisphere 186.6
Stria terminalis, bed nucleus
nTPM: 400.9
1974 Female, age 91, both hemispheres 478.6
2486 Female, age 94, both hemispheres 394.2
2201 Male, age 74, unknown 329.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

281.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 210.0
Samples: 246

Max nTPM: 440.8
Min nTPM: 74.7
Std nTPM: 80.6
Median nTPM: 202.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 440.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 404.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 399.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 396.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 385.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 374.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 372.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 369.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 360.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 359.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 358.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 358.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 358.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 352.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 349.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 341.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 341.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 340.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 339.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 335.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 333.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 330.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 328.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 328.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 324.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 320.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 320.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 317.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 316.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 314.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 309.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 309.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 307.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 305.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 305.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 299.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 298.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 297.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 297.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 296.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 295.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 294.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 294.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 293.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 293.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 292.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 287.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 286.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 284.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 281.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 277.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 276.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 274.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 274.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 272.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 272.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 270.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 269.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 268.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 268.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 266.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 265.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 264.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 263.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 261.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 261.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 259.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 258.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 258.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 257.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 255.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 255.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 254.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 252.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 252.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 252.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 251.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 251.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 250.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 249.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 249.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 248.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 248.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 248.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 247.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 246.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 245.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 244.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 242.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 239.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 235.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 235.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 235.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 233.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 233.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 230.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 230.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 229.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 227.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 226.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 225.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 224.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 223.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 223.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 222.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 221.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 220.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 220.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 219.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 219.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 218.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 215.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 214.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 214.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 212.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 210.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 208.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 207.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 207.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 207.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 205.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 203.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 203.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 202.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 199.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 198.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 197.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 195.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 195.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 195.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 195.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 194.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 193.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 193.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 193.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 192.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 192.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 191.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 190.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 190.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 190.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 189.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 186.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 186.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 186.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 186.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 184.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 182.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 181.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 178.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 177.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 177.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 177.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 177.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 175.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 174.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 173.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 171.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 170.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 169.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 168.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 165.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 164.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 164.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 163.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 163.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 161.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 161.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 160.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 157.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 154.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 151.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 151.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 150.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 150.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 149.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 147.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 147.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 146.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 145.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 145.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 142.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 141.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 140.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 140.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 138.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 138.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 137.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 136.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 135.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 133.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 132.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 130.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 127.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 126.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 126.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 125.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 124.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 124.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 121.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 121.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 121.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 118.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 117.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 117.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 117.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 116.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 116.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 116.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 114.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 114.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 114.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 113.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 112.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 112.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 112.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 111.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 107.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 107.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 107.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 107.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 106.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 106.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 105.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 103.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 103.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 100.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 100.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 98.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 98.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 93.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 92.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 91.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 90.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 90.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 89.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 86.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 84.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 83.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 81.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 77.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 74.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 281.2
Samples: 246

Max nTPM: 823.1
Min nTPM: 57.9
Std nTPM: 109.6
Median nTPM: 287.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 823.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 557.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 533.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 519.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 509.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 503.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 501.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 459.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 457.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 454.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 450.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 449.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 448.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 448.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 437.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 436.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 435.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 432.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 432.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 427.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 424.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 424.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 422.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 422.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 415.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 411.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 409.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 409.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 408.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 407.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 406.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 403.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 403.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 402.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 401.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 401.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 400.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 396.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 396.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 394.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 394.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 394.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 389.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 389.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 389.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 384.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 384.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 380.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 378.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 377.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 376.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 371.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 362.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 361.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 361.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 361.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 359.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 359.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 359.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 349.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 349.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 344.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 343.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 342.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 342.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 342.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 341.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 340.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 340.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 340.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 340.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 338.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 336.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 336.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 334.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 333.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 333.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 331.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 328.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 328.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 327.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 327.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 327.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 325.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 325.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 325.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 324.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 321.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 321.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 321.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 319.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 317.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 317.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 316.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 316.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 315.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 314.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 314.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 314.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 314.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 312.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 311.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 310.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 310.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 308.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 307.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 306.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 304.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 303.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 303.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 300.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 298.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 298.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 296.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 295.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 293.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 292.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 292.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 290.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 290.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 289.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 289.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 287.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 286.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 285.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 285.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 285.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 285.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 283.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 279.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 277.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 276.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 275.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 272.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 270.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 269.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 267.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 265.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 262.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 261.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 255.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 253.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 251.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 250.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 248.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 247.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 244.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 243.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 243.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 243.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 243.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 243.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 242.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 241.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 241.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 240.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 239.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 236.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 236.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 236.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 234.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 231.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 231.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 231.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 230.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 229.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 229.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 229.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 222.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 222.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 221.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 219.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 217.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 212.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 212.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 210.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 210.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 210.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 209.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 208.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 206.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 206.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 204.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 203.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 200.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 198.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 192.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 192.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 189.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 185.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 184.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 183.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 179.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 176.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 175.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 173.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 173.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 170.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 170.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 170.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 170.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 168.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 168.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 166.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 165.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 163.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 163.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 161.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 161.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 161.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 156.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 153.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 151.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 151.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 150.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 150.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 146.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 140.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 138.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 137.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 135.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 133.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 130.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 129.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 126.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 126.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 121.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 121.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 120.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 120.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 119.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 119.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 117.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 117.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 115.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 113.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 111.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 111.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 108.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 106.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 102.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 94.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 84.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 82.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 57.9
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Brain - Putamen (basal ganglia)
Average nTPM: 213.3
Samples: 205

Max nTPM: 429.7
Min nTPM: 83.8
Std nTPM: 79.2
Median nTPM: 205.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 429.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 419.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 391.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 387.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 377.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 371.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 363.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 359.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 353.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 351.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 350.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 347.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 343.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 343.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 342.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 339.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 338.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 325.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 324.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 320.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 317.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 317.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 315.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 315.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 312.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 311.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 309.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 307.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 306.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 304.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 302.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 301.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 298.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 298.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 298.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 296.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 294.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 293.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 292.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 291.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 290.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 290.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 289.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 286.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 286.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 285.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 284.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 283.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 280.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 278.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 278.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 274.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 271.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 270.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 269.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 268.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 267.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 266.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 263.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 262.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 260.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 259.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 258.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 258.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 257.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 257.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 256.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 256.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 255.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 252.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 250.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 247.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 245.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 245.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 244.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 241.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 237.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 237.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 236.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 230.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 228.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 228.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 217.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 217.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 216.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 215.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 213.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 213.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 212.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 212.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 212.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 212.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 211.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 211.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 210.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 210.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 208.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 207.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 206.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 205.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 205.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 205.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 205.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 205.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 203.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 201.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 201.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 197.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 197.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 197.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 196.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 195.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 194.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 194.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 193.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 192.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 189.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 187.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 187.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 187.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 186.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 185.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 185.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 182.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 182.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 181.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 181.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 180.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 178.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 178.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 177.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 177.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 175.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 175.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 174.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 174.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 173.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 172.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 172.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 168.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 167.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 165.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 165.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 165.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 164.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 162.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 159.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 157.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 156.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 156.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 151.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 151.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 148.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 147.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 142.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 142.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 141.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 141.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 139.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 138.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 137.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 136.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 132.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 132.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 129.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 128.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 128.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 128.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 127.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 127.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 126.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 125.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 125.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 124.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 117.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 117.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 116.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 116.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 116.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 115.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 114.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 113.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 113.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 112.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 112.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 111.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 110.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 110.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 108.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 107.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 105.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 105.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 104.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 102.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 101.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 100.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 99.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 99.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 98.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 98.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 92.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 90.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 90.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 86.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 83.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

578.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 337.5
FF:10164-103B2 76 years, female 337.5
Nucleus accumbens
Scaled Tags Per Million: 578.0
FF:10037-101F1 23-56 years, mixed 578.0
Putamen
Scaled Tags Per Million: 556.3
FF:10176-103C5 60 years, female 556.3
Globus pallidus
Scaled Tags Per Million: 158.1
FF:10175-103C4 60 years, female 192.2
FF:10161-103A8 76 years, female 123.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

572.7
Pig sample Sample description nTPM
Caudate
nTPM: 572.7
Samples: 4

Max nTPM: 683.8
Min nTPM: 469.1
Sample A Female 469.1
Sample B Female 602.2
Sample C Male 683.8
Sample D Male 535.7
Putamen
nTPM: 504.5
Samples: 4

Max nTPM: 663.9
Min nTPM: 301.2
Sample A Female 301.2
Sample B Female 439.0
Sample C Male 663.9
Sample D Male 614.0
Septum
nTPM: 548.1
Samples: 4

Max nTPM: 802.3
Min nTPM: 399.8
Sample A Female 544.3
Sample B Female 446.1
Sample C Male 802.3
Sample D Male 399.8
Ventral pallidum
nTPM: 485.2
Samples: 4

Max nTPM: 637.5
Min nTPM: 353.9
Sample A Female 520.1
Sample B Female 353.9
Sample C Male 637.5
Sample D Male 429.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

578.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 578.3
Samples: 4

Max nTPM: 658.6
Min nTPM: 485.0
Sample A Male 607.5
Sample B Male 658.6
Sample C Female 485.0
Sample D Female 562.2
Septum
nTPM: 408.1
Samples: 4

Max nTPM: 428.0
Min nTPM: 381.4
Sample A Male 428.0
Sample B Male 423.8
Sample C Female 381.4
Sample D Female 399.1
Ventral forebrain
nTPM: 454.0
Samples: 4

Max nTPM: 473.0
Min nTPM: 429.2
Sample A Male 468.1
Sample B Male 429.2
Sample C Female 473.0
Sample D Female 445.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.8
77464848 Antisense, RP_070129_02_B12, Mouse strain C57BL/6J (56 days, male) 23.4
808 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 5.9
809 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 3.4
810 Sense, RPS_Baylor_37025, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 7.1
77464848 Antisense, RP_070129_02_B12, Mouse strain C57BL/6J (56 days, male) 18.1
808 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 3.3
809 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 1.9
810 Sense, RPS_Baylor_37025, Mouse strain C57BL/6J (56 days, male) 0.0

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