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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS19 is not prognostic in Glioblastoma Multiforme (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
3375.6
Number of samples
141
Samples
Sample
Description
pTPM
TCGA-27-2524-01A
56 years, male, white, stage:'--, dead, 231 days
8110.3
TCGA-06-0744-01A
66 years, male, white, stage:'--, dead, 1426 days
7580.2
TCGA-12-3652-01A
60 years, male, white, stage:'--, dead, 1062 days
7537.0
TCGA-06-2563-01A
72 years, female, white, stage:'--, alive, 932 days
7257.4
TCGA-06-0178-01A
38 years, male, white, stage:'--, dead, 2681 days
6639.2
TCGA-14-0817-01A
69 years, female, white, stage:'--, dead, 164 days
6626.6
TCGA-14-0871-01A
74 years, female, white, stage:'--, dead, 880 days
6418.0
TCGA-32-5222-01A
66 years, male, white, stage:'--, dead, 585 days
6388.3
TCGA-12-3650-01A
46 years, male, white, stage:'--, dead, 333 days
6159.0
TCGA-27-1831-01A
66 years, male, white, stage:'--, dead, 505 days
5672.1
TCGA-14-1823-01A
58 years, female, white, stage:'--, dead, 543 days
5403.9
TCGA-06-0174-01A
54 years, male, white, stage:'--, dead, 98 days
5340.9
TCGA-26-5133-01A
59 years, male, white, stage:'--, alive, 452 days
5297.0
TCGA-14-2554-01A
52 years, female, white, stage:'--, dead, 532 days
5229.0
TCGA-12-5295-01A
60 years, female, white, stage:'--, dead, 454 days
5073.8
TCGA-02-2483-01A
43 years, male, asian, stage:'--, alive, 466 days
4948.9
TCGA-02-2485-01A
53 years, male, black or african american, stage:'--, alive, 470 days
4892.2
TCGA-41-2572-01A
67 years, male, white, stage:'--, dead, 406 days
4868.2
TCGA-27-2523-01A
63 years, male, white, stage:'--, dead, 489 days
4854.1
TCGA-28-5218-01A
63 years, male, white, stage:'--, dead, 157 days
4786.3
TCGA-06-0190-01A
62 years, male, white, stage:'--, dead, 317 days
4753.5
TCGA-12-0616-01A
36 years, female, white, stage:'--, dead, 448 days
4640.7
TCGA-14-1829-01A
57 years, male, black or african american, stage:'--, alive, 218 days
4630.6
TCGA-06-2570-01A
21 years, female, white, stage:'--, alive, 958 days
4569.8
TCGA-06-2565-01A
59 years, male, asian, stage:'--, dead, 506 days
4347.9
TCGA-06-5417-01A
45 years, female, white, stage:'--, alive, 155 days
4333.7
TCGA-06-0138-01A
43 years, male, white, stage:'--, dead, 737 days
4303.1
TCGA-41-2571-01A
89 years, male, white, stage:'--, dead, 26 days
4266.6
TCGA-06-0129-01A
30 years, male, asian, stage:'--, dead, 1024 days
4265.1
TCGA-06-0184-01A
63 years, male, white, stage:'--, dead, 2126 days
4250.4
TCGA-32-1982-01A
76 years, female, white, stage:'--, dead, 142 days
4203.7
TCGA-02-2486-01A
64 years, male, white, stage:'--, dead, 618 days
4153.7
TCGA-32-2638-01A
67 years, male, white, stage:'--, dead, 766 days
4113.9
TCGA-28-5208-01A
52 years, male, white, stage:'--, dead, 544 days
4112.2
TCGA-06-0139-01A
40 years, male, white, stage:'--, dead, 362 days
4066.4
TCGA-12-5299-01A
56 years, female, white, stage:'--, dead, 98 days
4051.6
TCGA-06-0645-01A
55 years, female, white, stage:'--, dead, 175 days
3999.3
TCGA-06-5418-01A
75 years, female, white, stage:'--, dead, 83 days
3938.4
TCGA-06-0238-01A
46 years, male, white, stage:'--, dead, 405 days
3884.0
TCGA-06-0168-01A
59 years, female, white, stage:'--, dead, 598 days
3873.5
TCGA-28-5209-01A
66 years, female, white, stage:'--, alive, 442 days
3815.6
TCGA-02-0055-01A
62 years, female, white, stage:'--, dead, 76 days
3810.3
TCGA-32-2632-01A
80 years, male, white, stage:'--, dead, 269 days
3758.9
TCGA-27-2521-01A
34 years, male, white, stage:'--, dead, 510 days
3748.1
TCGA-12-3653-01A
34 years, female, white, stage:'--, dead, 442 days
3741.8
TCGA-06-0157-01A
63 years, female, white, stage:'--, dead, 97 days
3702.2
TCGA-06-0686-01A
53 years, male, white, stage:'--, dead, 432 days
3677.9
TCGA-06-0219-01A
67 years, male, white, stage:'--, dead, 22 days
3614.3
TCGA-27-2526-01A
79 years, female, white, stage:'--, dead, 87 days
3613.2
TCGA-26-5132-01A
74 years, male, white, stage:'--, alive, 286 days
3596.9
TCGA-76-4932-01A
50 years, female, white, stage:'--, dead, 1458 days
3559.3
TCGA-28-5204-01A
72 years, male, white, stage:'--, dead, 454 days
3536.5
TCGA-14-1034-01A
60 years, female, stage:'--, dead, 485 days
3510.0
TCGA-16-0846-01A
85 years, male, white, stage:'--, dead, 119 days
3509.0
TCGA-19-5960-01A
56 years, male, white, stage:'--, dead, 455 days
3463.8
TCGA-19-4065-01A
36 years, male, white, stage:'--, alive, 214 days
3416.6
TCGA-06-0125-01A
63 years, female, white, stage:'--, dead, 1448 days
3368.9
TCGA-06-5416-01A
23 years, female, white, stage:'--, alive, 204 days
3350.4
TCGA-14-0787-01A
69 years, male, asian, stage:'--, dead, 68 days
3342.3
TCGA-06-5408-01A
54 years, female, white, stage:'--, dead, 357 days
3335.5
TCGA-14-0789-01A
54 years, male, white, stage:'--, dead, 342 days
3296.7
TCGA-32-4213-01A
47 years, female, white, stage:'--, alive, 604 days
3264.2
TCGA-06-5414-01A
61 years, male, white, stage:'--, alive, 273 days
3217.9
TCGA-06-5413-01A
67 years, male, white, stage:'--, alive, 268 days
3205.2
TCGA-27-2528-01A
62 years, male, white, stage:'--, dead, 480 days
3191.4
TCGA-06-0743-01A
69 years, male, white, stage:'--, dead, 803 days
3174.6
TCGA-12-0821-01A
62 years, male, white, stage:'--, dead, 323 days
3172.6
TCGA-06-0211-01A
47 years, male, white, stage:'--, dead, 360 days
3148.6
TCGA-06-2558-01A
75 years, female, white, stage:'--, dead, 380 days
3138.7
TCGA-76-4927-01A
58 years, male, white, stage:'--, dead, 535 days
3137.4
TCGA-26-5135-01A
72 years, female, white, stage:'--, dead, 270 days
3119.6
TCGA-28-2513-01A
69 years, female, white, stage:'--, alive, 222 days
3093.1
TCGA-76-4931-01A
70 years, female, white, stage:'--, dead, 279 days
3080.7
TCGA-28-2509-01A
77 years, female, white, stage:'--, alive, 145 days
3026.3
TCGA-06-0130-01A
54 years, male, white, stage:'--, dead, 394 days
3016.7
TCGA-28-5216-01A
52 years, male, white, stage:'--, alive, 415 days
2978.3
TCGA-06-2557-01A
76 years, male, black or african american, stage:'--, dead, 33 days
2972.0
TCGA-14-1825-01A
70 years, male, white, stage:'--, dead, 232 days
2945.4
TCGA-06-0158-01A
73 years, male, white, stage:'--, dead, 329 days
2928.8
TCGA-15-0742-01A
65 years, male, white, stage:'--, dead, 419 days
2905.7
TCGA-06-0882-01A
30 years, male, white, stage:'--, dead, 632 days
2893.3
TCGA-41-3915-01A
48 years, male, white, stage:'--, dead, 360 days
2890.8
TCGA-06-5856-01A
58 years, male, white, stage:'--, dead, 114 days
2875.2
TCGA-06-0156-01A
57 years, male, white, stage:'--, dead, 178 days
2870.1
TCGA-06-5412-01A
78 years, female, white, stage:'--, dead, 138 days
2859.3
TCGA-06-2559-01A
83 years, male, white, stage:'--, dead, 150 days
2848.8
TCGA-32-2634-01A
82 years, male, white, stage:'--, alive, 693 days
2816.9
TCGA-26-5134-01A
74 years, male, white, stage:'--, alive, 167 days
2810.9
TCGA-41-5651-01A
59 years, female, black or african american, stage:'--, dead, 460 days
2788.3
TCGA-12-0618-01A
49 years, male, white, stage:'--, dead, 395 days
2785.2
TCGA-19-2624-01A
51 years, male, white, stage:'--, dead, 5 days
2751.6
TCGA-06-0132-01A
49 years, male, white, stage:'--, dead, 771 days
2734.6
TCGA-28-5207-01A
71 years, male, white, stage:'--, dead, 343 days
2730.7
TCGA-06-0749-01A
50 years, male, black or african american, stage:'--, dead, 82 days
2716.8
TCGA-28-5220-01A
67 years, male, white, stage:'--, dead, 388 days
2698.3
TCGA-06-2569-01A
24 years, female, black or african american, stage:'--, alive, 13 days
2690.7
TCGA-32-2615-01A
62 years, male, white, stage:'--, dead, 485 days
2681.8
TCGA-27-1832-01A
59 years, female, white, stage:'--, dead, 300 days
2674.2
TCGA-19-2629-01A
60 years, male, white, stage:'--, dead, 737 days
2630.6
TCGA-27-1834-01A
56 years, male, white, stage:'--, dead, 1233 days
2578.9
TCGA-06-0210-01A
72 years, female, white, stage:'--, dead, 225 days
2574.2
TCGA-06-5410-01A
72 years, female, white, stage:'--, dead, 108 days
2571.7
TCGA-06-2564-01A
50 years, male, white, stage:'--, alive, 181 days
2560.9
TCGA-06-0745-01A
59 years, male, white, stage:'--, dead, 239 days
2546.5
TCGA-27-1837-01A
36 years, male, white, stage:'--, dead, 427 days
2533.6
TCGA-26-1442-01A
43 years, male, white, stage:'--, alive, 953 days
2531.6
TCGA-06-0750-01A
43 years, male, white, stage:'--, dead, 28 days
2453.5
TCGA-06-2567-01A
65 years, male, white, stage:'--, dead, 133 days
2436.0
TCGA-28-2514-01A
45 years, male, asian, stage:'--, alive, 160 days
2372.5
TCGA-06-0644-01A
71 years, male, black or african american, stage:'--, dead, 384 days
2362.0
TCGA-19-2625-01A
76 years, female, white, stage:'--, dead, 124 days
2310.6
TCGA-06-0141-01A
62 years, male, white, stage:'--, dead, 313 days
2306.4
TCGA-06-2562-01A
81 years, male, white, stage:'--, dead, 382 days
2297.6
TCGA-26-5139-01A
65 years, female, white, stage:'--, alive, 48 days
2281.6
TCGA-06-0747-01A
53 years, male, white, stage:'--, dead, 82 days
2243.0
TCGA-32-1980-01A
72 years, male, white, stage:'--, dead, 36 days
2190.2
TCGA-27-1830-01A
57 years, male, white, stage:'--, dead, 154 days
2136.3
TCGA-06-5411-01A
51 years, male, white, stage:'--, dead, 254 days
2120.5
TCGA-28-1753-01A
53 years, male, white, stage:'--, alive, 37 days
2112.5
TCGA-19-2620-01A
70 years, male, white, stage:'--, dead, 148 days
2101.5
TCGA-06-0878-01A
74 years, male, white, stage:'--, alive, 218 days
2096.8
TCGA-06-0646-01A
60 years, male, white, stage:'--, dead, 175 days
2052.3
TCGA-32-2616-01A
48 years, female, white, stage:'--, dead, 224 days
2034.8
TCGA-06-5859-01A
63 years, male, white, stage:'--, alive, 139 days
2013.6
TCGA-28-5215-01A
62 years, female, white, stage:'--, dead, 335 days
2012.5
TCGA-06-0187-01A
69 years, male, white, stage:'--, dead, 828 days
1984.7
TCGA-19-2619-01A
55 years, female, black or african american, stage:'--, alive, 294 days
1977.6
TCGA-76-4925-01A
76 years, male, white, stage:'--, dead, 146 days
1926.0
TCGA-12-0619-01A
60 years, male, white, stage:'--, dead, 1062 days
1850.1
TCGA-27-1835-01A
53 years, female, white, stage:'--, dead, 648 days
1833.4
TCGA-06-5858-01A
45 years, female, white, stage:'--, alive, 187 days
1803.8
TCGA-15-1444-01A
21 years, male, white, stage:'--, dead, 1537 days
1767.3
TCGA-08-0386-01A
74 years, male, white, stage:'--, dead, 548 days
1720.2
TCGA-41-4097-01A
63 years, female, white, stage:'--, dead, 6 days
1704.2
TCGA-19-1390-01A
63 years, female, white, stage:'--, dead, 772 days
1541.3
TCGA-02-0047-01A
78 years, male, white, stage:'--, dead, 448 days
1489.1
TCGA-27-2519-01A
48 years, male, white, stage:'--, dead, 550 days
1396.4
TCGA-32-1970-01A
59 years, male, white, stage:'--, dead, 468 days
1360.2
TCGA-76-4929-01A
76 years, female, white, stage:'--, dead, 111 days
1268.3
TCGA-06-2561-01A
53 years, female, white, stage:'--, dead, 537 days
1234.8
TCGA-06-1804-01A
81 years, female, white, stage:'--, dead, 414 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS19 is not prognostic in Glioblastoma Multiforme (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
381.9
Number of samples
58
Samples
Sample
Description
pTPM
AK139
N, NA, stage:NA, dead, 270 days
799.8
AK178
N, NA, stage:NA, dead, 240 days
794.7
AK074
N, NA, stage:NA, alive, 300 days
759.5
AK043
N, NA, stage:NA, alive, 660 days
754.0
AK133
N, NA, stage:NA, dead, 360 days
727.2
AK098
N, NA, stage:NA, dead, 660 days
662.6
AK002
N, NA, stage:NA, dead, 570 days
624.4
AK213
N, NA, stage:NA, alive, 2010 days
607.4
AK165
N, NA, stage:NA, alive, 360 days
590.6
AK049
N, NA, stage:NA, dead, 180 days
582.6
AK072
N, NA, stage:NA, dead, 150 days
573.9
AK236
N, NA, stage:NA, dead, 360 days
501.2
AK199
N, NA, stage:NA, alive, 1860 days
487.6
AK053
N, NA, stage:NA, dead, 300 days
481.2
AK183
N, NA, stage:NA, alive, 360 days
470.7
AK055
N, NA, stage:NA, dead, 240 days
444.4
AK185
N, NA, stage:NA, alive, 330 days
435.8
AK231
N, NA, stage:NA, dead, 240 days
433.5
AK142
N, NA, stage:NA, alive, 90 days
431.4
AK188
N, NA, stage:NA, alive, 420 days
423.7
AK088
N, NA, stage:NA, dead, 360 days
418.3
AK100
N, NA, stage:NA, alive, 960 days
388.4
AK123
N, NA, stage:NA, dead, 180 days
383.2
AK158
N, NA, stage:NA, dead, 360 days
359.6
AK066
N, NA, stage:NA, alive, 960 days
352.5
AK068
N, NA, stage:NA, alive, 360 days
345.9
AK089
N, NA, stage:NA, dead, 330 days
344.2
AK167
N, NA, stage:NA, dead, 180 days
341.1
AK117
N, NA, stage:NA, dead, 210 days
338.9
AK071
N, NA, stage:NA, dead, 540 days
331.6
AK153
N, NA, stage:NA, dead, 240 days
327.4
AK134
N, NA, stage:NA, dead, 360 days
327.4
AK156
N, NA, stage:NA, dead, 330 days
303.5
AK149
N, NA, stage:NA, dead, 420 days
300.2
AK216
N, NA, stage:NA, dead, 360 days
294.8
AK076
N, NA, stage:NA, alive, 660 days
281.6
AK035
N, NA, stage:NA, dead, 210 days
280.9
AK091
N, NA, stage:NA, dead, 210 days
280.6
AK124
N, NA, stage:NA, alive, 1920 days
270.0
AK041
N, NA, stage:NA, alive, 810 days
269.9
AK195
N, NA, stage:NA, dead, 390 days
266.4
AK103
N, NA, stage:NA, alive, 1320 days
265.8
AK099
N, NA, stage:NA, dead, 420 days
258.5
AK226
N, NA, stage:NA, dead, 360 days
253.1
AK079
N, NA, stage:NA, dead, 210 days
252.1
AK081
N, NA, stage:NA, dead, 180 days
249.2
AK218
N, NA, stage:NA, dead, 180 days
241.6
AK051
N, NA, stage:NA, dead, 360 days
236.5
AK173
N, NA, stage:NA, dead, 180 days
228.3
AK030
N, NA, stage:NA, dead, 120 days
217.3
AK227
N, NA, stage:NA, alive, 300 days
214.1
AK205
N, NA, stage:NA, dead, 120 days
210.9
AK085
N, NA, stage:NA, alive, 660 days
203.5
AK015
N, NA, stage:NA, alive, 720 days
196.1
AK003
N, NA, stage:NA, dead, 600 days
195.0
AK102
N, NA, stage:NA, alive, 1740 days
188.4
AK005
N, NA, stage:NA, dead, 240 days
186.6
AK006
N, NA, stage:NA, dead, 360 days
164.0
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GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)
Number of samples
110
Samples
Sample ID
Sample type
nRPX
CPT0127480003
Tumor
0.9
CPT0206560003
Tumor
0.8
CPT0224390004
Tumor
0.7
CPT0218330004
Tumor
0.6
CPT0206000004
Tumor
0.6
CPT0218690004
Tumor
0.6
CPT0217710008
Tumor
0.5
CPT0093450003
Tumor
0.5
CPT0093360003
Tumor
0.5
CPT0168080003
Tumor
0.5
CPT0161730003
Tumor
0.5
CPT0123530003
Tumor
0.4
CPT0217430008
Tumor
0.4
CPT0207090003
Tumor
0.4
CPT0078580003
Tumor
0.4
CPT0168830003
Tumor
0.4
CPT0167530003
Tumor
0.4
CPT0093590003
Tumor
0.3
CPT0182580003
Tumor
0.3
CPT0206670004
Tumor
0.3
CPT0206780003
Tumor
0.3
CPT0127420003
Tumor
0.3
CPT0228220003
Tumor
0.3
CPT0205450004
Tumor
0.2
CPT0205670004
Tumor
0.2
CPT0217880003
Tumor
0.2
CPT0224540004
Tumor
0.2
CPT0217190003
Tumor
0.2
CPT0125220003
Tumor
0.2
CPT0217060003
Tumor
0.2
CPT0125570003
Tumor
0.2
CPT0167860004
Tumor
0.2
CPT0093510003
Tumor
0.2
CPT0218960004
Tumor
0.2
CPT0167970003
Tumor
0.2
CPT0225760003
Tumor
0.1
CPT0167750004
Tumor
0.1
CPT0189850004
Tumor
0.1
CPT0217100003
Tumor
0.1
CPT0064650003
Tumor
0.1
CPT0002410011
Tumor
0.1
CPT0089150003
Tumor
0.1
CPT0206230003
Tumor
0.1
CPT0218770003
Tumor
0.1
CPT0218830004
Tumor
0.1
CPT0189750004
Tumor
0.1
CPT0190360004
Tumor
0.1
CPT0225730003
Tumor
0.1
CPT0171580008
Tumor
0.1
CPT0205780003
Tumor
0.1
CPT0168480003
Tumor
0.1
CPT0079790003
Tumor
0.1
CPT0224600003
Tumor
0.1
CPT0218890004
Tumor
0.1
CPT0182500003
Tumor
0.0
CPT0221180003
Tumor
0.0
CPT0168590003
Tumor
0.0
CPT0201710003
Tumor
0.0
CPT0071100003
Tumor
0.0
CPT0064890003
Tumor
0.0
CPT0087680003
Tumor
0.0
CPT0093550003
Tumor
0.0
CPT0175060003
Tumor
0.0
CPT0189570004
Tumor
0.0
CPT0216920008
Tumor
0.0
CPT0207030003
Tumor
0.0
CPT0087570003
Tumor
-0.1
CPT0218670003
Tumor
-0.1
CPT0168720003
Tumor
-0.1
CPT0189650004
Tumor
-0.1
CPT0087950003
Tumor
-0.1
CPT0205570003
Tumor
-0.1
CPT0209440003
Tumor
-0.1
CPT0104330003
Tumor
-0.1
CPT0162140003
Tumor
-0.1
CPT0168270003
Tumor
-0.1
CPT0167640003
Tumor
-0.1
CPT0186100003
Tumor
-0.1
CPT0189460003
Tumor
-0.2
CPT0125510003
Tumor
-0.2
CPT0199770003
Tumor
-0.2
CPT0206330003
Tumor
-0.2
CPT0206110003
Tumor
-0.2
CPT0162020003
Tumor
-0.2
CPT0189250003
Tumor
-0.2
CPT0092440003
Tumor
-0.2
CPT0206450003
Tumor
-0.2
CPT0224330003
Tumor
-0.2
CPT0168380003
Tumor
-0.2
CPT0205890003
Tumor
-0.2
CPT0206880003
Tumor
-0.2
CPT0204360003
Normal
-0.2
CPT0182550003
Tumor
-0.3
CPT0219080004
Tumor
-0.3
CPT0087730003
Tumor
-0.3
CPT0204340003
Normal
-0.3
CPT0208980003
Tumor
-0.3
CPT0190240004
Tumor
-0.3
CPT0204400003
Normal
-0.3
CPT0204330003
Normal
-0.4
CPT0104220003
Tumor
-0.4
CPT0204410003
Normal
-0.4
CPT0204380003
Normal
-0.4
CPT0196850003
Tumor
-0.5
CPT0204350003
Normal
-0.5
CPT0204420003
Normal
-0.5
CPT0204370003
Normal
-0.5
CPT0204390003
Normal
-0.6
CPT0217000004
Tumor
-0.7
CPT0162100003
Tumor
-0.7
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GLIOMA - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.