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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:219.2 nTPM
HPA:96.2 nTPM
GTEx:219.2 nTPM
FANTOM5:43.5 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018999
Cholangiocytes Not detected
Hepatocytes Low



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.2
N/A
Female, age 60
Liver sample 21
nTPM: 139.7
overview
Male, age 54
Liver sample 23
nTPM: 174.4
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 169.2
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 38
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 57.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 45.5
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 52.7
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 113.3
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 103.6
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 67.7
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.2
GTEx sample id Sample description nTPM
Liver
Average nTPM: 219.2
Samples: 226

Max nTPM: 472.0
Min nTPM: 54.7
Std nTPM: 87.6
Median nTPM: 202.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 472.0
GTEX-RN64-1826-SM-48FDV 50-59 years, male 463.8
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 447.5
GTEX-18465-1626-SM-7LG6N 50-59 years, male 416.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 401.1
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 399.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 395.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 394.4
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 389.5
GTEX-REY6-1226-SM-48FDR 60-69 years, male 389.2
GTEX-12696-0826-SM-5EGGE 60-69 years, male 388.1
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 374.0
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 368.6
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 366.7
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 362.9
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 362.2
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 352.3
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 351.6
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 351.0
GTEX-13112-1426-SM-5EGH8 50-59 years, male 350.7
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 349.6
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 348.6
GTEX-14E7W-1526-SM-6871X 70-79 years, male 348.2
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 337.1
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 336.4
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 334.5
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 334.4
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 334.2
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 333.4
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 328.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 328.0
GTEX-14JG1-1626-SM-664NH 40-49 years, male 324.9
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 324.9
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 320.8
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 320.3
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 316.5
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 315.5
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 314.5
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 312.1
GTEX-1B933-1226-SM-731DW 50-59 years, female 310.9
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 310.1
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 309.9
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 306.0
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 303.4
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 302.9
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 302.8
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 302.4
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 302.3
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 300.8
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 295.9
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 290.5
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 288.3
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 287.7
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 287.4
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 286.9
GTEX-144GL-1426-SM-79OMA 50-59 years, male 283.7
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 282.8
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 281.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 280.4
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 279.3
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 278.9
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 278.4
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 278.0
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 275.8
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 272.4
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 272.2
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 272.1
GTEX-18A7A-1526-SM-72D69 50-59 years, female 269.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 266.3
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 259.1
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 258.9
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 256.9
GTEX-11GSP-0626-SM-5986T 60-69 years, female 253.9
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 253.3
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 252.4
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 248.1
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 247.5
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 247.1
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 246.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 246.4
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 242.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 241.9
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 240.4
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 238.0
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 237.1
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 236.2
GTEX-YECK-1926-SM-4W21H 60-69 years, male 235.7
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 235.0
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 234.8
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 234.1
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 230.9
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 230.5
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 228.4
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 227.3
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 227.0
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 226.9
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 224.3
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 222.1
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 221.4
GTEX-RU72-1426-SM-46MUF 50-59 years, female 219.6
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 218.8
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 218.3
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 218.1
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 217.0
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 216.9
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 212.9
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 210.8
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 210.6
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 210.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 210.1
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 204.6
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 203.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 203.1
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 202.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 201.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 201.6
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 199.2
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 198.7
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 198.5
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 198.4
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 197.8
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 197.6
GTEX-14PHX-0526-SM-664NW 50-59 years, male 196.1
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 193.1
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 192.9
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 192.6
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 192.5
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 192.3
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 191.3
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 191.0
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 190.3
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 190.1
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 189.6
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 187.4
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 183.7
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 182.5
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 180.7
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 178.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 177.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 174.7
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 174.2
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 172.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 172.5
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 172.3
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 172.1
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 170.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 170.1
GTEX-13113-1326-SM-5GCOI 60-69 years, female 170.0
GTEX-1399T-0826-SM-5IFES 60-69 years, male 168.6
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 168.0
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 168.0
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 166.8
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 165.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 165.2
GTEX-Q734-0326-SM-48U15 40-49 years, female 164.8
GTEX-R53T-0326-SM-48FEC 50-59 years, female 163.7
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 163.6
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 163.4
GTEX-S32W-1926-SM-4AD63 50-59 years, female 161.2
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 160.5
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 160.1
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 159.0
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 158.5
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 157.9
GTEX-S33H-1626-SM-4AD68 30-39 years, male 157.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 157.2
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 156.0
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 154.2
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 153.2
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 152.5
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 149.5
GTEX-QEL4-1226-SM-447A4 50-59 years, male 149.3
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 148.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 146.6
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 146.3
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 144.9
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 144.7
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 144.7
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 143.3
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 141.3
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 140.1
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 139.7
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 138.2
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 137.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 137.1
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 136.4
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 135.0
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 134.5
GTEX-O5YV-0726-SM-EV798 60-69 years, female 133.2
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 133.1
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 130.5
GTEX-17HHE-0126-SM-79398 50-59 years, male 128.9
GTEX-X261-1726-SM-4PQYT 50-59 years, male 126.9
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 126.3
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 126.1
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 125.4
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 125.3
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 124.0
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 123.0
GTEX-14XAO-0226-SM-68728 60-69 years, female 121.6
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 117.9
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 115.3
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 115.3
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 114.8
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 114.6
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 113.2
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 111.0
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 110.4
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 107.9
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 107.0
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 102.6
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 101.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 98.3
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 97.5
GTEX-1B932-1426-SM-793AN 40-49 years, female 95.0
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 94.4
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 88.9
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 87.5
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 86.7
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 86.3
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 82.5
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 79.7
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 78.7
GTEX-18A66-2026-SM-7189C 60-69 years, male 73.9
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 54.9
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 54.7
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

43.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 43.5
FF:10018-101C9 64,69,70 years, mixed 43.5

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