PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:213.2 nTPM
FANTOM5:104.8 Scaled Tags Per Million
Pig:225.2 nTPM
Mouse:163.7 nTPM
Allen mouse:10.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 213.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 143.7
1984 Male, age 76, both hemispheres 152.3
2090 Male, age 80, both hemispheres 151.7
2188 Female, age 91, both hemispheres 145.3
2301 Female, age 85, both hemispheres 125.6
Area postrema
nTPM: 167.9
2799 Male, age 61, both hemispheres 219.4
2306 Male, age 80, both hemispheres 150.4
2054 Male, age 76, both hemispheres 133.8
Dorsal cochlear nucleus
nTPM: 156.8
2802 Male, age 74, right hemisphere 178.2
2058 Male, age 76, both hemispheres 162.2
2370 Male, age 61, both hemispheres 161.6
2187 Female, age 91, both hemispheres 151.0
2378 Male, age 80, both hemispheres 130.9
Dorsal medullary reticular nucleus
nTPM: 175.3
2040 Female, age 85, both hemispheres 232.2
2088 Male, age 76, both hemispheres 149.2
2373 Male, age 61, both hemispheres 144.4
Dorsal motor vagal complex
nTPM: 166.3
2000 Male, age 74, unknown 213.2
2844 Male, age 55, unknown 206.0
2133 Female, age 91, both hemispheres 202.1
2797 Male, age 61, both hemispheres 189.3
2643 Male, age 74, both hemispheres 148.5
2813 Female, age 72, unknown 139.5
2185 Male, age 76, both hemispheres 134.1
2807 Female, age 85, both hemispheres 97.8
Dorsal tegmental nucleus
nTPM: 153.6
2083 Male, age 80, both hemispheres 187.8
2326 Male, age 74, both hemispheres 154.2
1936 Male, age 76, left hemisphere 143.8
2358 Male, age 61, both hemispheres 128.7
Dorsolateral tegmental area
nTPM: 149.8
2654 Male, age 80, both hemispheres 184.6
2751 Female, age 85, both hemispheres 157.1
2337 Male, age 61, both hemispheres 149.9
2360 Male, age 74, both hemispheres 141.3
2141 Male, age 76, both hemispheres 116.1
Gigantocellular reticular nuclei, medullary
nTPM: 158.6
2462 Male, age 74, both hemispheres 188.6
2314 Male, age 61, both hemispheres 176.1
1876 Female, age 85, both hemispheres 157.9
2310 Male, age 80, both hemispheres 146.0
2387 Female, age 91, both hemispheres 143.0
2022 Male, age 76, right hemisphere 139.9
Gigantocellular reticular nuclei, pars
nTPM: 162.7
2168 Male, age 76, both hemispheres 218.9
2084 Female, age 85, both hemispheres 179.0
2336 Male, age 61, both hemispheres 154.2
2706 Male, age 80, both hemispheres 132.1
2330 Male, age 80, both hemispheres 129.3
Inferior olive
nTPM: 167.0
2563 Male, age 74, both hemispheres 224.5
2085 Female, age 85, both hemispheres 175.0
2178 Male, age 61, both hemispheres 164.4
2379 Male, age 80, both hemispheres 136.3
2628 Female, age 91, both hemispheres 134.6
Kolliker-Fuse nucleus
nTPM: 162.6
2163 Male, age 80, both hemispheres 205.4
2793 Female, age 91, left hemisphere 147.8
2315 Male, age 76, right hemisphere 134.5
Lateral lemniscal nuclei
nTPM: 170.0
2169 Male, age 76, both hemispheres 210.0
2746 Female, age 85, left hemisphere 178.5
2036 Male, age 80, both hemispheres 174.9
2453 Male, age 74, right hemisphere 156.2
2320 Female, age 91, left hemisphere 130.2
Lateral medullary reticular nucleus
nTPM: 172.1
2044 Male, age 76, both hemispheres 216.3
2305 Male, age 74, both hemispheres 182.2
2852 Male, age 80, both hemispheres 173.1
2804 Female, age 91, both hemispheres 163.2
2374 Male, age 61, both hemispheres 151.0
2190 Female, age 85, both hemispheres 146.8
Lateral parabrachial nucleus
nTPM: 160.9
2139 Female, age 85, right hemisphere 193.0
2790 Male, age 61, both hemispheres 173.9
2013 Male, age 80, both hemispheres 164.0
2792 Male, age 76, both hemispheres 112.8
Lateral vestibular nucleus
nTPM: 184.4
2184 Male, age 76, both hemispheres 212.0
2311 Male, age 80, both hemispheres 156.9
Locus coeruleus
nTPM: 205.8
2014 Male, age 55, unknown 262.8
2123 Female, age 91, both hemispheres 257.6
1980 Male, age 76, both hemispheres 247.8
2317 Female, age 72, unknown 212.0
2720 Male, age 74, both hemispheres 166.5
2162 Male, age 80, both hemispheres 162.9
2788 Male, age 74, unknown 130.8
Medial olivary nucleus
nTPM: 145.8
2138 Female, age 91, both hemispheres 159.7
1943 Male, age 61, both hemispheres 158.7
2851 Male, age 80, both hemispheres 132.7
1962 Male, age 76, both hemispheres 132.1
Medial parabrachial nucleus
nTPM: 160.8
2170 Female, age 91, both hemispheres 185.7
2156 Male, age 61, both hemispheres 173.5
2463 Female, age 85, right hemisphere 168.9
2854 Male, age 80, both hemispheres 144.4
2786 Male, age 76, both hemispheres 131.7
Medial periolivary nuclei
nTPM: 175.4
2063 Male, age 76, both hemispheres 256.5
2171 Female, age 85, both hemispheres 206.6
2791 Male, age 74, right hemisphere 158.1
2081 Male, age 80, both hemispheres 138.8
2458 Female, age 91, both hemispheres 116.7
Medial vestibular nucleus
nTPM: 181.0
2134 Male, age 76, both hemispheres 226.3
2093 Male, age 80, both hemispheres 179.6
2801 Male, age 74, both hemispheres 176.5
2624 Male, age 61, both hemispheres 176.2
2743 Female, age 85, both hemispheres 173.5
2803 Female, age 91, both hemispheres 154.1
Motor facial nucleus
nTPM: 168.1
2062 Male, age 76, both hemispheres 278.9
2126 Male, age 61, both hemispheres 174.1
2365 Male, age 74, right hemisphere 163.6
2795 Female, age 91, both hemispheres 137.1
2697 Female, age 85, both hemispheres 129.3
2327 Male, age 80, both hemispheres 125.8
Motor hypoglossal nucleus
nTPM: 171.4
2125 Female, age 91, both hemispheres 206.6
2132 Female, age 85, both hemispheres 198.8
2182 Male, age 80, both hemispheres 170.8
2277 Male, age 76, both hemispheres 150.5
2461 Male, age 61, both hemispheres 130.0
Motor trigeminal nucleus
nTPM: 155.3
2560 Male, age 74, both hemispheres 178.0
2335 Male, age 61, both hemispheres 167.1
2079 Male, age 80, both hemispheres 161.7
2309 Male, age 76, both hemispheres 141.8
2321 Female, age 91, both hemispheres 128.2
Nuclei of the trapezoid body
nTPM: 188.0
1983 Male, age 76, both hemispheres 258.6
2159 Male, age 61, both hemispheres 201.4
2735 Female, age 85, both hemispheres 199.9
2166 Male, age 80, both hemispheres 153.3
2368 Female, age 91, both hemispheres 126.7
Nucleus ambiguus
nTPM: 213.2
2096 Female, age 85, both hemispheres 277.3
2071 Male, age 76, both hemispheres 149.1
Nucleus cuneatus
nTPM: 156.0
2564 Male, age 74, both hemispheres 203.4
2131 Male, age 76, both hemispheres 190.6
2100 Male, age 76, both hemispheres 173.2
2562 Male, age 61, both hemispheres 172.7
2376 Male, age 61, both hemispheres 164.5
2380 Male, age 80, both hemispheres 130.2
2381 Male, age 80, both hemispheres 127.6
2808 Female, age 85, both hemispheres 126.5
2805 Female, age 91, both hemispheres 115.6
Nucleus gracilis
nTPM: 133.7
2627 Male, age 74, both hemispheres 154.0
2382 Male, age 80, both hemispheres 133.3
2299 Female, age 85, both hemispheres 113.9
Nucleus raphe magnus
nTPM: 182.5
2160 Male, age 61, both hemispheres 231.5
2051 Male, age 76, both hemispheres 222.3
2172 Female, age 85, both hemispheres 205.1
2455 Male, age 74, both hemispheres 169.3
2328 Male, age 80, both hemispheres 142.2
2459 Female, age 91, both hemispheres 124.5
Nucleus raphe obscurus
nTPM: 152.4
2800 Male, age 61, midline 174.6
2845 Female, age 85, midline 172.6
2142 Male, age 76, midline 110.0
Nucleus raphe pallidus
nTPM: 168.3
1924 Male, age 61, midline 211.2
2183 Male, age 80, midline 186.6
2145 Male, age 76, midline 107.2
Nucleus tractus solitarii
nTPM: 135.9
2656 Male, age 76, both hemispheres 156.0
2307 Male, age 80, both hemispheres 134.6
2191 Female, age 85, both hemispheres 127.0
2144 Female, age 91, right hemisphere 125.9
Paramedian reticular nucleus
nTPM: 180.5
2057 Male, age 80, both hemispheres 218.0
2050 Female, age 85, both hemispheres 202.1
2313 Male, age 61, both hemispheres 188.5
2052 Male, age 76, both hemispheres 113.6
Parvicellular reticular nuclei
nTPM: 169.4
2119 Male, age 80, both hemispheres 187.3
2095 Male, age 76, both hemispheres 164.1
2558 Male, age 74, both hemispheres 156.7
Parvicellular reticular nuclei, medullary
nTPM: 177.2
2091 Female, age 85, both hemispheres 198.8
2189 Female, age 91, both hemispheres 182.8
2181 Male, age 80, left hemisphere 149.8
Pedunculopontine tegmental nucleus
nTPM: 147.3
2334 Male, age 80, both hemispheres 171.8
1921 Female, age 85, both hemispheres 147.5
2338 Male, age 61, both hemispheres 122.7
Peritrigeminal nucleus
nTPM: 196.6
2067 Female, age 85, both hemispheres 216.1
2179 Male, age 61, both hemispheres 194.7
2136 Male, age 76, both hemispheres 179.0
Pontine nuclei
nTPM: 206.0
1968 Male, age 76, left hemisphere 255.7
1863 Male, age 55, unknown 255.3
2109 Female, age 72, unknown 237.4
2787 Female, age 85, both hemispheres 237.4
2727 Male, age 61, right hemisphere 205.3
2454 Male, age 74, left hemisphere 176.2
2115 Male, age 80, left hemisphere 148.2
2319 Female, age 91, both hemispheres 132.7
Pontine raphe nucleus
nTPM: 177.5
2122 Female, age 85, midline 198.6
2853 Male, age 76, midline 156.4
Posteroventral cochlear nucleus
nTPM: 157.9
2371 Male, age 61, both hemispheres 180.4
2752 Female, age 85, both hemispheres 179.0
2070 Male, age 76, both hemispheres 174.3
2135 Female, age 91, both hemispheres 130.5
2341 Male, age 80, both hemispheres 125.3
Prepositus hypoglossal nucleus
nTPM: 169.7
2855 Female, age 85, right hemisphere 179.5
2086 Male, age 80, both hemispheres 160.0
Principal sensory trigeminal nucleus
nTPM: 172.1
2158 Male, age 61, both hemispheres 218.7
2324 Male, age 76, both hemispheres 184.3
2008 Male, age 80, left hemisphere 166.1
2367 Female, age 91, left hemisphere 119.4
Reticular pontine nucleus, caudal
nTPM: 159.7
2092 Male, age 76, both hemispheres 193.8
2559 Male, age 74, both hemispheres 173.2
2332 Male, age 80, right hemisphere 152.3
2457 Female, age 91, both hemispheres 119.6
Reticular pontine nucleus, oral
nTPM: 151.6
2012 Female, age 85, both hemispheres 175.3
1939 Male, age 80, both hemispheres 164.2
2361 Male, age 74, both hemispheres 151.2
2167 Male, age 76, both hemispheres 142.6
2366 Female, age 91, both hemispheres 124.7
Reticulotegmental nucleus
nTPM: 162.5
2325 Male, age 76, both hemispheres 178.4
2452 Male, age 74, both hemispheres 177.8
2333 Male, age 80, both hemispheres 157.3
2322 Female, age 91, both hemispheres 136.5
Spinal trigeminal nucleus, caudal
nTPM: 171.6
2390 Female, age 91, both hemispheres 218.1
2447 Male, age 76, both hemispheres 201.5
2308 Male, age 80, both hemispheres 154.5
2312 Male, age 61, both hemispheres 144.6
2642 Male, age 74, both hemispheres 139.5
Spinal trigeminal nucleus, interpolar
nTPM: 202.1
2066 Male, age 76, right hemisphere 263.8
2625 Male, age 61, both hemispheres 249.3
2033 Male, age 80, both hemispheres 205.1
2386 Female, age 85, both hemispheres 154.9
2389 Female, age 91, both hemispheres 137.4
Spinal trigeminal nucleus, oral
nTPM: 175.0
2164 Male, age 80, both hemispheres 193.0
2737 Female, age 85, both hemispheres 184.7
1978 Male, age 76, both hemispheres 147.1
Spinal vestibular nucleus
nTPM: 172.0
2780 Male, age 80, both hemispheres 197.2
2748 Male, age 76, both hemispheres 181.3
2186 Female, age 91, both hemispheres 178.1
2384 Male, age 74, both hemispheres 165.6
2806 Female, age 85, both hemispheres 159.3
2796 Male, age 61, both hemispheres 150.7
Subcoeruleus area
nTPM: 155.6
2089 Male, age 76, left hemisphere 162.5
2451 Male, age 74, both hemispheres 161.1
1958 Male, age 80, both hemispheres 158.4
2323 Female, age 91, left hemisphere 153.1
2369 Female, age 85, left hemisphere 143.1
Superior olive
nTPM: 161.3
2020 Male, age 76, both hemispheres 189.5
1875 Female, age 85, both hemispheres 181.6
2364 Male, age 74, right hemisphere 169.7
2329 Male, age 80, right hemisphere 135.9
2561 Female, age 91, both hemispheres 129.8
Superior vestibular nucleus
nTPM: 158.9
2015 Male, age 80, both hemispheres 185.6
2061 Male, age 76, both hemispheres 148.2
2383 Male, age 74, both hemispheres 143.0
Ventral medullary reticular nucleus
nTPM: 164.7
2372 Male, age 61, both hemispheres 167.8
2060 Male, age 76, both hemispheres 161.7
Ventral periolivary nuclei
nTPM: 158.0
2165 Male, age 80, both hemispheres 180.8
2023 Male, age 76, both hemispheres 174.9
2130 Female, age 85, both hemispheres 160.8
2794 Female, age 91, left hemisphere 115.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 182.0
2741 Female, age 85, both hemispheres 206.4
1986 Male, age 76, both hemispheres 200.0
2180 Male, age 61, both hemispheres 187.8
2302 Female, age 91, both hemispheres 162.6
2118 Male, age 80, both hemispheres 153.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 153.8
1959 Male, age 76, both hemispheres 174.6
2449 Male, age 74, both hemispheres 170.1
2840 Female, age 85, both hemispheres 150.8
2359 Male, age 61, both hemispheres 149.0
2161 Male, age 80, both hemispheres 148.2
2456 Female, age 91, both hemispheres 130.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 104.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 104.8
FF:10182-103D2 60 years, female 125.7
FF:10165-103B3 76 years, female 83.8
Medulla oblongata
Scaled Tags Per Million: 81.6
FF:10174-103C3 60 years, female 91.2
FF:10038-101F2 18-64 years, mixed 79.4
FF:10155-103A2 76 years, female 74.1
Pons
Scaled Tags Per Million: 85.7
FF:10033-101E6 18-54 years, mixed 85.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 225.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 212.9
Samples: 4

Max nTPM: 248.2
Min nTPM: 184.7
Sample A Female 188.7
Sample B Female 184.7
Sample C Male 248.2
Sample D Male 229.9
Pons
nTPM: 225.2
Samples: 4

Max nTPM: 265.8
Min nTPM: 185.2
Sample A Female 216.1
Sample B Female 185.2
Sample C Male 265.8
Sample D Male 233.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 163.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 163.7
Samples: 4

Max nTPM: 192.4
Min nTPM: 132.0
Sample A Male 189.1
Sample B Male 132.0
Sample C Female 192.4
Sample D Female 141.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 10.4
75750398 Antisense, RP_060518_04_G08, Mouse strain C57BL/6J (56 days, male) 10.4
Pons
Expression energy: 9.5
75750398 Antisense, RP_060518_04_G08, Mouse strain C57BL/6J (56 days, male) 9.5

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