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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:78.7 nTPM
HPA Brain:110.4 nTPM
GTEx:78.7 nTPM
FANTOM5:134.5 Scaled Tags Per Million
Pig:79.9 nTPM
Mouse:72.6 nTPM
Allen mouse:12.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA077966
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 65.8
1857 Female, age 85, left hemisphere 90.3
2290 Female, age 72, unknown 73.9
1854 Male, age 80, left hemisphere 73.0
1781 Male, age 74, unknown 71.1
2289 Male, age 61, right hemisphere 65.4
2846 Female, age 79, unknown 56.7
2288 Male, age 75, left hemisphere 51.3
2481 Female, age 94, left hemisphere 44.7
Globus pallidus, externus
nTPM: 41.6
2646 Male, age 61, right hemisphere 56.6
2567 Female, age 72, unknown 46.5
2395 Male, age 75, both hemispheres 37.2
2772 Female, age 79, unknown 36.8
1996 Male, age 80, right hemisphere 31.1
Globus pallidus, internus
nTPM: 35.5
2566 Female, age 72, unknown 47.6
2483 Female, age 94, right hemisphere 43.6
2037 Male, age 80, right hemisphere 34.1
2111 Female, age 85, right hemisphere 32.0
1818 Male, age 74, unknown 31.9
2778 Female, age 91, both hemispheres 31.6
2287 Male, age 75, right hemisphere 27.9
Nucleus accumbens
nTPM: 80.0
1783 Male, age 74, unknown 99.4
1856 Female, age 91, right hemisphere 98.4
1806 Female, age 85, left hemisphere 97.7
2824 Male, age 61, right hemisphere 89.5
2698 Female, age 72, unknown 83.0
2732 Male, age 80, right hemisphere 74.9
2286 Male, age 75, left hemisphere 56.5
2391 Female, age 94, left hemisphere 40.4
Nucleus basalis of Meynert
nTPM: 57.3
2569 Male, age 61, both hemispheres 67.0
2821 Male, age 75, both hemispheres 58.5
2484 Female, age 94, left hemisphere 54.7
2393 Male, age 80, right hemisphere 49.1
Nucleus of the diagonal band
nTPM: 110.4
2195 Female, age 85, both hemispheres 136.1
1979 Male, age 74, unknown 112.8
2775 Male, age 80, right hemisphere 108.8
1812 Female, age 91, both hemispheres 97.6
2029 Male, age 61, right hemisphere 96.6
Putamen
nTPM: 59.3
1838 Male, age 80, right hemisphere 74.9
2647 Male, age 75, left hemisphere 73.1
1937 Female, age 91, right hemisphere 66.7
1829 Male, age 74, unknown 52.3
2489 Female, age 72, unknown 51.9
2466 Female, age 79, unknown 51.8
2482 Female, age 94, left hemisphere 44.6
Septal nuclei
nTPM: 97.9
1960 Male, age 74, unknown 145.4
2059 Female, age 85, both hemispheres 118.7
2629 Female, age 94, right hemisphere 99.6
2031 Female, age 72, unknown 91.8
2009 Female, age 91, both hemispheres 82.5
2394 Male, age 61, left hemisphere 75.4
2199 Male, age 80, right hemisphere 71.5
Stria terminalis, bed nucleus
nTPM: 99.6
2201 Male, age 74, unknown 109.4
2486 Female, age 94, both hemispheres 101.2
1974 Female, age 91, both hemispheres 88.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.5
Samples: 246

Max nTPM: 79.6
Min nTPM: 21.0
Std nTPM: 9.8
Median nTPM: 48.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 79.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 76.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 75.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 74.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 67.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 67.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 66.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 66.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 66.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 65.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 65.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 65.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 63.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 63.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 62.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 62.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 62.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 62.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 62.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 61.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 61.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 60.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 60.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 60.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 60.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 60.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 60.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 59.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 59.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 59.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 58.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 58.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 58.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 58.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 58.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 58.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 57.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 57.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 56.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 56.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 56.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 56.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 56.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 56.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 55.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 55.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 55.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 54.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 54.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 54.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 54.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 54.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 53.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 53.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 53.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 52.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 52.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 52.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 52.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 52.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 51.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 51.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 51.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 51.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 51.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 51.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 50.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 50.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 50.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 50.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 50.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 50.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 50.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 50.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 49.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 49.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 49.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 49.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 49.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 49.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 49.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 48.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 48.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 48.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 48.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 48.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 48.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 47.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 47.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 47.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 47.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 47.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 46.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 46.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 46.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 46.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 46.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 46.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 46.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 46.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 46.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 46.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 46.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 45.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 45.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 45.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 45.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 45.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 45.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 44.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 44.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 44.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 44.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 44.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 44.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 44.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 44.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 44.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 44.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 43.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 43.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 43.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 42.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 42.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 42.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 42.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 42.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 41.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 41.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 41.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 41.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 41.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 41.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 40.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 40.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 40.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 38.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 38.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 38.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 38.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 37.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 37.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 36.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 36.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 36.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 35.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 34.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 34.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 34.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 32.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 32.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 31.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 31.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 30.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 29.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 25.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 21.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 78.7
Samples: 246

Max nTPM: 137.4
Min nTPM: 24.3
Std nTPM: 21.0
Median nTPM: 79.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 137.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 133.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 131.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 124.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 122.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 120.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 119.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 118.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 118.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 116.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 114.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 113.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 111.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 110.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 110.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 110.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 109.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 109.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 109.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 109.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 108.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 107.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 107.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 107.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 106.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 105.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 104.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 104.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 104.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 103.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 103.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 102.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 102.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 100.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 100.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 100.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 100.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 99.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 99.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 98.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 98.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 98.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 97.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 97.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 97.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 96.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 96.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 96.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 95.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 95.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 95.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 95.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 94.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 94.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 94.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 94.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 94.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 94.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 93.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 93.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 93.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 92.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 91.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 91.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 90.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 90.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 90.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 90.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 90.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 89.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 89.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 88.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 88.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 88.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 88.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 87.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 87.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 87.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 87.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 86.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 86.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 86.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 86.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 86.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 86.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 86.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 86.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 85.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 85.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 85.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 85.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 85.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 85.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 85.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 84.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 84.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 84.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 84.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 83.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 83.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 83.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 83.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 83.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 83.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 83.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 82.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 82.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 82.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 82.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 82.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 80.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 80.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 80.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 80.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 80.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 80.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 79.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 79.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 79.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 79.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 79.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 79.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 78.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 78.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 78.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 78.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 78.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 77.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 77.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 76.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 76.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 76.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 76.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 75.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 75.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 75.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 75.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 75.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 75.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 74.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 74.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 74.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 74.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 74.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 74.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 74.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 73.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 73.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 73.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 73.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 73.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 72.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 72.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 72.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 72.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 72.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 72.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 72.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 71.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 71.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 70.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 70.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 70.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 70.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 70.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 69.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 69.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 69.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 68.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 68.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 68.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 67.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 67.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 67.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 66.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 66.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 65.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 65.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 65.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 65.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 64.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 64.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 64.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 64.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 64.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 64.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 64.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 63.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 63.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 61.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 61.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 60.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 60.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 60.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 59.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 58.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 57.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 57.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 57.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 56.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 56.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 56.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 55.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 55.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 53.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 53.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 51.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 51.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 51.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 50.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 50.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 49.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 49.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 49.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 48.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 48.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 47.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 45.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 43.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 42.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 40.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 38.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 36.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 36.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 35.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 32.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 30.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 28.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 28.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 27.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 24.3
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Brain - Putamen (basal ganglia)
Average nTPM: 47.4
Samples: 205

Max nTPM: 81.5
Min nTPM: 28.3
Std nTPM: 10.6
Median nTPM: 45.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 81.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 80.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 79.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 75.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 74.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 73.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 69.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 68.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 68.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 65.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 65.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 65.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 63.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 62.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 62.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 62.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 61.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 60.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 60.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 60.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 60.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 59.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 59.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 59.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 58.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 58.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 58.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 57.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 57.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 57.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 57.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 57.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 56.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 56.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 55.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 55.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 55.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 54.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 53.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 53.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 53.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 52.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 52.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 52.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 52.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 52.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 52.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 51.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 51.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 51.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 51.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 51.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 50.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 50.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 50.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 49.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 49.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 49.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 49.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 48.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 48.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 48.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 48.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 48.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 48.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 48.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 48.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 47.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 47.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 47.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 47.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 47.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 47.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 46.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 46.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 46.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 45.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 45.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 45.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 45.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 45.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 45.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 45.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 44.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 44.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 44.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 44.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 44.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 44.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 44.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 44.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 43.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 43.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 43.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 43.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 43.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 43.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 43.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 43.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 42.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 42.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 42.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 42.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 42.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 42.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 42.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 42.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 41.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 41.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 41.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 41.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 41.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 41.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 41.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 40.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 40.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 40.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 39.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 39.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 39.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 39.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 39.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 39.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 39.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 38.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 38.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 38.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 38.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 38.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 37.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 37.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 37.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 37.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 37.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 37.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 36.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 36.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 36.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 36.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 36.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 36.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 36.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 36.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 36.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 36.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 36.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 35.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 34.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 34.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 34.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 34.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 34.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 34.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 33.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 33.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 32.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 31.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 31.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 31.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 30.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 29.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 29.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 28.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

134.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 94.7
FF:10164-103B2 76 years, female 94.7
Nucleus accumbens
Scaled Tags Per Million: 116.6
FF:10037-101F1 23-56 years, mixed 116.6
Putamen
Scaled Tags Per Million: 134.5
FF:10176-103C5 60 years, female 134.5
Globus pallidus
Scaled Tags Per Million: 31.8
FF:10175-103C4 60 years, female 35.3
FF:10161-103A8 76 years, female 28.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.9
Pig sample Sample description nTPM
Caudate
nTPM: 56.2
Samples: 4

Max nTPM: 65.0
Min nTPM: 46.1
Sample A Female 51.4
Sample B Female 65.0
Sample C Male 62.1
Sample D Male 46.1
Putamen
nTPM: 42.2
Samples: 4

Max nTPM: 50.1
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 39.8
Sample C Male 46.2
Sample D Male 50.1
Septum
nTPM: 79.9
Samples: 4

Max nTPM: 91.0
Min nTPM: 70.8
Sample A Female 82.0
Sample B Female 70.8
Sample C Male 91.0
Sample D Male 75.9
Ventral pallidum
nTPM: 61.6
Samples: 4

Max nTPM: 76.8
Min nTPM: 52.1
Sample A Female 61.6
Sample B Female 52.1
Sample C Male 76.8
Sample D Male 55.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 56.5
Samples: 4

Max nTPM: 60.6
Min nTPM: 51.6
Sample A Male 51.6
Sample B Male 60.6
Sample C Female 53.1
Sample D Female 60.6
Septum
nTPM: 66.4
Samples: 4

Max nTPM: 74.0
Min nTPM: 55.4
Sample A Male 74.0
Sample B Male 68.8
Sample C Female 67.5
Sample D Female 55.4
Ventral forebrain
nTPM: 72.6
Samples: 4

Max nTPM: 86.5
Min nTPM: 63.0
Sample A Male 73.8
Sample B Male 63.0
Sample C Female 86.5
Sample D Female 66.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.6
71836832 Antisense, RP_051017_02_B07, Mouse strain C57BL/6J (56 days, male) 13.6
67765715 Antisense, RP_040916_01_E10, Mouse strain C57BL/6J (56 days, male) 11.5
Pallidum
Expression energy: 12.5
71836832 Antisense, RP_051017_02_B07, Mouse strain C57BL/6J (56 days, male) 13.4
67765715 Antisense, RP_040916_01_E10, Mouse strain C57BL/6J (56 days, male) 11.6

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