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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
90.0
nTPM
GTEx:
90.0
nTPM
FANTOM5:
172.7
Scaled Tags Per Million
Pig:
93.2
nTPM
Mouse:
388.1
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
90.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 90.0
Samples: 105
Max nTPM: 159.6
Min nTPM: 14.7
Std nTPM: 34.0
Median nTPM:
319_1
81 years, male
159.6
163_1
78 years, male
155.0
377_1
82 years, female
154.1
506_1
65 years, male
147.8
218_1
71 years, female
147.3
352_1
62 years, male
144.4
452_1
88 years, female
143.5
320_1
89 years, female
142.4
322_1
76 years, male
141.9
321_1
62 years, female
138.9
353_1
82 years, female
138.6
386_1
76 years, male
134.2
350_1
84 years, female
133.2
177_1
74 years, male
131.6
376_1
75 years, female
130.8
356_1
87 years, female
129.3
351_1
91 years, male
127.9
172_1
72 years, female
127.6
354_1
81 years, female
125.0
295_1
61 years, female
123.5
349_1
83 years, male
121.6
292_1
71 years, male
121.4
318_1
68 years, male
121.4
379_1
60 years, male
119.7
293_1
68 years, female
119.2
316_1
62 years, male
117.0
394_1
75 years, female
116.5
243_1
75 years, male
116.0
425_1
59 years, female
110.2
404_1
82 years, female
110.0
189_1
76 years, male
109.9
355_1
70 years, female
109.3
384_1
83 years, male
109.1
173_1
67 years, male
106.9
447_1
81 years, male
106.9
286_1
68 years, female
106.1
503_1
68 years, male
105.0
6_1
73 years, female
104.7
375_1
74 years, female
103.6
335_1
73 years, female
103.2
17_1
71 years, male
101.5
405_1
91 years, male
100.6
406_1
79 years, male
100.6
264_1
73 years, female
99.7
4_1
88 years, female
99.3
2_1
77 years, female
98.8
317_1
60 years, male
96.8
251_1
78 years, male
96.4
291_1
76 years, male
95.4
517_1
88 years, male
94.6
348_1
84 years, male
94.5
480_1
63 years, male
91.8
153_1
70 years, female
88.9
389_1
86 years, female
87.0
237_1
82 years, male
86.7
229_1
69 years, female
86.6
396_1
62 years, male
85.8
347_1
72 years, male
85.0
18_1
88 years, male
84.8
41_1
94 years, female
82.7
526_1
61 years, male
81.9
115_1
83 years, male
81.5
145_1
84 years, male
79.4
120_1
70 years, female
78.2
254_1
77 years, female
77.5
99_1
64 years, male
74.3
518_1
75 years, female
73.2
35_1
74 years, female
72.1
265_1
87 years, male
72.1
137_1
83 years, male
71.9
266_1
85 years, male
71.9
109_1
81 years, female
71.2
246_1
77 years, male
70.9
9_1
66 years, female
70.2
324_1
76 years, male
69.9
468_1
89 years, male
68.7
311_1
78 years, male
67.2
42_1
85 years, male
66.1
288_1
66 years, female
65.6
126_1
63 years, male
63.0
313_1
79 years, female
62.5
139_1
64 years, female
61.3
307_1
66 years, female
60.4
314_1
67 years, male
58.6
308_1
70 years, female
57.2
499_1
55 years, female
55.7
217_1
76 years, male
54.6
81_1
67 years, male
54.1
142_1
61 years, female
54.0
315_1
62 years, female
52.0
117_1
61 years, male
49.6
119_1
70 years, female
47.1
501_1
88 years, male
46.3
495_1
57 years, female
45.6
32_1
67 years, male
42.8
43_1
64 years, female
42.6
162_1
79 years, female
41.2
414_1
84 years, female
40.5
415_1
77 years, female
39.6
466_1
57 years, female
37.8
89_1
63 years, male
37.3
149_1
88 years, male
29.8
413_1
59 years, female
28.0
490_1
67 years, female
18.2
491_1
89 years, female
14.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
