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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55.5 nTPM
HPA Brain:106.5 nTPM
GTEx:55.5 nTPM
FANTOM5:111.6 Scaled Tags Per Million
Pig:69.2 nTPM
Mouse:65.7 nTPM
Allen mouse:2.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB046446
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 82.0
2290 Female, age 72, unknown 90.9
1781 Male, age 74, unknown 90.3
1857 Female, age 85, left hemisphere 90.1
2846 Female, age 79, unknown 85.3
1854 Male, age 80, left hemisphere 83.7
2289 Male, age 61, right hemisphere 73.6
2481 Female, age 94, left hemisphere 73.0
2288 Male, age 75, left hemisphere 68.9
Globus pallidus, externus
nTPM: 75.0
2567 Female, age 72, unknown 80.4
2646 Male, age 61, right hemisphere 78.2
2772 Female, age 79, unknown 77.3
1996 Male, age 80, right hemisphere 71.2
2395 Male, age 75, both hemispheres 67.7
Globus pallidus, internus
nTPM: 70.5
2483 Female, age 94, right hemisphere 76.5
2287 Male, age 75, right hemisphere 76.1
2566 Female, age 72, unknown 71.8
1818 Male, age 74, unknown 69.6
2778 Female, age 91, both hemispheres 67.2
2037 Male, age 80, right hemisphere 67.1
2111 Female, age 85, right hemisphere 65.5
Nucleus accumbens
nTPM: 84.7
1783 Male, age 74, unknown 108.0
1856 Female, age 91, right hemisphere 96.1
2824 Male, age 61, right hemisphere 91.1
1806 Female, age 85, left hemisphere 90.6
2698 Female, age 72, unknown 82.6
2286 Male, age 75, left hemisphere 75.6
2732 Male, age 80, right hemisphere 71.6
2391 Female, age 94, left hemisphere 62.1
Nucleus basalis of Meynert
nTPM: 77.2
2569 Male, age 61, both hemispheres 82.5
2484 Female, age 94, left hemisphere 80.0
2393 Male, age 80, right hemisphere 74.2
2821 Male, age 75, both hemispheres 71.9
Nucleus of the diagonal band
nTPM: 106.5
2029 Male, age 61, right hemisphere 120.7
2775 Male, age 80, right hemisphere 116.7
1812 Female, age 91, both hemispheres 107.1
2195 Female, age 85, both hemispheres 104.0
1979 Male, age 74, unknown 84.1
Putamen
nTPM: 82.7
2647 Male, age 75, left hemisphere 94.7
2466 Female, age 79, unknown 85.1
1838 Male, age 80, right hemisphere 84.2
1829 Male, age 74, unknown 82.7
2489 Female, age 72, unknown 80.8
1937 Female, age 91, right hemisphere 80.5
2482 Female, age 94, left hemisphere 70.7
Septal nuclei
nTPM: 97.5
1960 Male, age 74, unknown 119.3
2031 Female, age 72, unknown 105.7
2059 Female, age 85, both hemispheres 99.7
2629 Female, age 94, right hemisphere 98.6
2009 Female, age 91, both hemispheres 94.8
2394 Male, age 61, left hemisphere 90.1
2199 Male, age 80, right hemisphere 74.2
Stria terminalis, bed nucleus
nTPM: 96.1
1974 Female, age 91, both hemispheres 107.8
2486 Female, age 94, both hemispheres 106.8
2201 Male, age 74, unknown 73.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 47.1
Samples: 246

Max nTPM: 81.7
Min nTPM: 23.6
Std nTPM: 9.1
Median nTPM: 46.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 81.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 73.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 71.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 69.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 68.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 68.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 68.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 67.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 65.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 65.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 64.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 64.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 62.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 62.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 61.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 61.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 60.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 60.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 59.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 58.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 58.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 57.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 57.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 57.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 57.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 56.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 56.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 55.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 55.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 54.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 54.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 54.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 54.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 54.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 54.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 54.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 54.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 54.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 54.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 53.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 53.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 53.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 52.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 52.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 52.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 52.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 51.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 51.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 51.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 51.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 51.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 51.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 51.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 51.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 51.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 50.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 50.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 50.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 50.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 50.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 49.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 49.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 49.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 49.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 49.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 49.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 49.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 48.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 48.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 48.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 48.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 48.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 48.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 48.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 48.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 48.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 48.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 47.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 47.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 47.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 47.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 46.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 46.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 46.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 46.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 46.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 46.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 46.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 46.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 46.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 46.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 45.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 45.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 45.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 45.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 45.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 45.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 45.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 45.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 45.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 45.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 44.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 44.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 44.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 43.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 43.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 43.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 43.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 43.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 42.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 42.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 42.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 42.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 42.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 42.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 42.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 41.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 41.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 41.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 41.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 41.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 40.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 40.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 40.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 40.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 40.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 40.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 40.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 40.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 39.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 39.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 39.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 39.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 39.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 39.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 38.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 38.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 38.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 38.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 38.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 38.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 38.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 38.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 37.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 37.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 37.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 36.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 36.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 36.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 35.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 35.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 35.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 34.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 34.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 33.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 33.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 33.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 33.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 33.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 33.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 31.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 31.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 30.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 29.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 23.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 55.5
Samples: 246

Max nTPM: 86.3
Min nTPM: 28.2
Std nTPM: 11.0
Median nTPM: 56.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 86.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 84.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 82.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 81.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 78.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 77.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 76.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 76.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 76.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 75.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 74.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 74.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 74.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 73.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 73.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 71.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 71.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 70.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 70.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 70.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 69.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 69.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 69.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 69.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 69.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 68.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 68.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 67.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 67.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 67.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 67.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 66.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 66.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 66.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 66.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 66.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 66.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 66.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 66.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 65.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 65.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 65.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 65.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 65.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 65.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 64.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 64.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 64.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 64.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 63.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 63.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 63.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 63.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 63.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 62.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 62.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 62.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 62.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 62.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 62.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 62.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 62.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 61.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 61.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 61.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 61.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 61.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 61.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 61.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 61.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 60.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 60.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 60.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 60.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 60.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 60.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 60.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 59.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 59.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 59.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 59.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 59.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 59.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 59.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 58.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 58.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 58.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 58.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 58.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 58.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 58.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 58.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 58.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 58.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 57.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 57.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 57.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 57.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 57.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 57.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 57.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 57.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 57.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 57.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 56.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 56.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 56.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 56.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 56.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 56.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 56.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 56.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 55.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 55.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 55.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 55.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 55.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 55.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 55.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 55.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 54.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 54.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 54.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 53.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 53.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 53.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 53.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 53.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 53.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 53.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 53.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 53.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 52.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 52.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 52.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 52.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 52.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 51.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 51.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 51.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 51.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 51.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 51.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 51.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 51.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 51.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 51.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 51.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 50.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 50.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 50.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 50.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 50.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 50.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 50.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 50.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 50.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 50.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 50.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 49.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 49.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 49.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 49.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 49.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 49.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 49.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 49.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 49.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 48.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 48.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 48.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 48.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 47.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 47.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 47.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 47.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 47.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 46.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 46.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 46.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 45.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 45.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 45.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 45.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 44.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 44.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 43.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 43.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 43.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 43.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 43.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 42.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 42.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 42.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 42.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 42.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 42.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 42.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 41.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 41.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 40.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 40.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 40.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 40.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 39.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 39.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 38.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 38.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 38.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 37.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 36.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 35.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 34.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 34.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 34.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 33.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 33.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 32.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 31.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 28.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 28.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 28.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 28.2
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Brain - Putamen (basal ganglia)
Average nTPM: 45.7
Samples: 205

Max nTPM: 66.2
Min nTPM: 23.7
Std nTPM: 7.3
Median nTPM: 45.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 66.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 65.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 64.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 64.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 61.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 59.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 57.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 57.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 57.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 56.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 55.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 55.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 55.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 54.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 54.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 54.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 53.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 53.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 53.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 53.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 53.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 53.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 52.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 52.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 52.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 52.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 52.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 52.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 51.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 51.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 51.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 51.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 51.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 50.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 50.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 50.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 50.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 50.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 50.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 50.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 50.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 49.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 49.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 49.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 49.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 48.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 48.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 48.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 48.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 48.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 48.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 48.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 48.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 48.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 47.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 47.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 47.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 47.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 47.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 47.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 47.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 47.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 46.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 46.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 46.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 46.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 46.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 46.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 46.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 46.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 46.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 46.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 46.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 46.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 46.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 45.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 45.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 45.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 45.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 45.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 45.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 45.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 45.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 45.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 45.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 45.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 44.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 44.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 44.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 44.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 44.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 43.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 43.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 43.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 43.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 43.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 43.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 43.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 43.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 43.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 43.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 42.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 42.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 42.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 42.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 42.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 42.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 42.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 42.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 41.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 41.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 41.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 41.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 41.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 41.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 41.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 41.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 41.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 40.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 40.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 40.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 40.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 39.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 39.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 39.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 39.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 39.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 38.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 38.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 38.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 38.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 38.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 38.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 38.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 38.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 37.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 37.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 37.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 37.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 36.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 36.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 36.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 36.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 36.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 36.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 36.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 35.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 35.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 34.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 33.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 33.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 33.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 33.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 32.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 31.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 31.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 30.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 30.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

111.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 111.6
FF:10164-103B2 76 years, female 111.6
Nucleus accumbens
Scaled Tags Per Million: 109.2
FF:10037-101F1 23-56 years, mixed 109.2
Putamen
Scaled Tags Per Million: 105.8
FF:10176-103C5 60 years, female 105.8
Globus pallidus
Scaled Tags Per Million: 81.5
FF:10175-103C4 60 years, female 85.5
FF:10161-103A8 76 years, female 77.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.2
Pig sample Sample description nTPM
Caudate
nTPM: 65.0
Samples: 4

Max nTPM: 75.9
Min nTPM: 50.8
Sample A Female 50.8
Sample B Female 68.9
Sample C Male 75.9
Sample D Male 64.5
Putamen
nTPM: 69.2
Samples: 4

Max nTPM: 81.1
Min nTPM: 55.6
Sample A Female 55.6
Sample B Female 63.9
Sample C Male 81.1
Sample D Male 76.1
Septum
nTPM: 64.1
Samples: 4

Max nTPM: 66.0
Min nTPM: 62.0
Sample A Female 64.1
Sample B Female 66.0
Sample C Male 64.3
Sample D Male 62.0
Ventral pallidum
nTPM: 65.7
Samples: 4

Max nTPM: 83.1
Min nTPM: 52.6
Sample A Female 52.6
Sample B Female 66.5
Sample C Male 83.1
Sample D Male 60.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 59.5
Samples: 4

Max nTPM: 64.2
Min nTPM: 54.9
Sample A Male 54.9
Sample B Male 56.5
Sample C Female 64.2
Sample D Female 62.4
Septum
nTPM: 59.0
Samples: 4

Max nTPM: 61.2
Min nTPM: 56.6
Sample A Male 60.9
Sample B Male 61.2
Sample C Female 57.3
Sample D Female 56.6
Ventral forebrain
nTPM: 65.7
Samples: 4

Max nTPM: 70.1
Min nTPM: 61.1
Sample A Male 66.5
Sample B Male 65.0
Sample C Female 61.1
Sample D Female 70.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.5
513243 Antisense, RP_040810_01_D11, Mouse strain C57BL/6J (56 days, male) 2.5
Pallidum
Expression energy: 2.9
513243 Antisense, RP_040810_01_D11, Mouse strain C57BL/6J (56 days, male) 2.9

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