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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Medium
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Medium
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Medium
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:95.0 nTPM
HPA Brain:97.0 nTPM
GTEx:95.0 nTPM
FANTOM5:300.6 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:19.7 nTPM
Allen mouse:10.9 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA073106
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Medium
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Medium
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Medium
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 89.5
2101 Male, age 74, right hemisphere 114.5
1774 Male, age 80, left hemisphere 113.5
1769 Male, age 76, right hemisphere 105.9
2055 Female, age 91, right hemisphere 104.1
2006 Male, age 61, right hemisphere 85.0
1768 Female, age 72, unknown 75.2
1788 Male, age 55, unknown 69.5
2003 Female, age 85, right hemisphere 48.2
Cerebellar nuclei
nTPM: 49.2
2177 Female, age 85, both hemispheres 95.8
2783 Female, age 72, unknown 61.1
2882 Male, age 76, left hemisphere 55.3
1966 Female, age 91, left hemisphere 50.5
1879 Male, age 55, unknown 46.1
2318 Male, age 74, left hemisphere 43.7
2005 Male, age 80, left hemisphere 31.5
1871 Male, age 74, unknown 30.1
2175 Male, age 61, right hemisphere 28.8
Flocculonodular lobe
nTPM: 97.0
2176 Female, age 91, right hemisphere 132.9
1771 Male, age 80, left hemisphere 122.2
1767 Male, age 76, left hemisphere 110.4
2004 Male, age 61, right hemisphere 92.7
1792 Male, age 74, unknown 81.6
1835 Female, age 85, right hemisphere 75.1
1765 Male, age 55, unknown 64.2
Vermis
nTPM: 88.8
1778 Female, age 91, left hemisphere 117.7
1751 Male, age 74, right hemisphere 104.8
1988 Female, age 85, left hemisphere 102.8
1770 Male, age 76, left hemisphere 101.8
2460 Male, age 61, both hemispheres 95.8
2834 Male, age 80, left hemisphere 82.3
1825 Male, age 74, unknown 71.7
1928 Female, age 72, unknown 66.4
1766 Male, age 55, unknown 55.6

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 82.1
Samples: 215

Max nTPM: 293.8
Min nTPM: 27.2
Std nTPM: 32.3
Median nTPM: 75.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 293.8
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 220.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 217.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 209.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 188.8
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 188.6
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 172.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 160.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 155.8
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 151.4
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 143.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 131.1
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 128.8
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 127.6
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 127.0
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 121.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 120.8
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 118.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 117.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 114.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 114.3
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 112.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 107.6
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 106.1
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 103.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 103.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 103.4
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 102.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 102.0
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 100.4
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 100.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 99.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 98.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 97.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 97.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 97.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 96.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 96.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 96.5
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 96.5
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 95.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 95.2
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 95.2
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 94.4
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 93.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 93.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 92.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 91.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 90.8
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 90.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 90.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 89.7
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 89.5
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 89.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 89.1
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 88.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 88.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 88.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 87.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 87.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 87.0
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 85.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 84.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 84.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 84.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 83.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 83.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 83.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 82.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 82.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 82.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 81.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 81.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 81.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 81.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 81.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 81.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 80.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 80.5
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 80.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 80.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 80.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 79.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 79.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 79.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 79.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 79.2
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 79.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 79.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 78.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 78.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 78.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 78.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 78.2
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 78.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 78.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 78.0
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 77.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 77.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 77.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 77.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 77.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 77.0
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 76.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 76.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 76.5
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 76.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 75.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 75.8
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 75.8
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 75.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 75.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 75.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 75.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 75.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 75.0
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 74.6
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 74.3
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 73.9
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 73.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 73.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 73.3
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 73.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 73.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 72.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 72.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 72.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 72.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 72.1
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 72.1
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 72.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 72.0
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 71.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 71.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 71.3
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 71.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 70.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 70.7
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 70.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 70.1
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 69.6
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 69.4
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 69.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 68.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 68.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 68.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 68.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 67.2
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 67.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 67.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 66.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 66.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 66.7
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 66.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 66.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 66.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 65.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 65.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 64.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 64.5
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 64.1
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 63.9
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 63.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 63.7
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 63.5
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 63.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 63.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 63.0
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 62.3
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 62.3
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 62.2
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 62.2
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 62.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 61.0
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 61.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 60.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 60.4
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 60.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 59.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 59.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 59.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 59.3
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 59.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 59.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 58.9
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 58.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 58.8
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 58.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 58.3
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 58.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 58.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 58.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 57.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 57.7
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 57.7
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 56.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 55.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 54.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 54.5
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 53.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 50.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 49.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 48.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 48.7
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 47.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 47.3
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 47.2
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 46.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 46.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 42.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 41.8
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 41.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 39.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 32.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 27.2
Show allShow less
Brain - Cerebellum
Average nTPM: 95.0
Samples: 241

Max nTPM: 241.1
Min nTPM: 40.8
Std nTPM: 27.8
Median nTPM: 91.2
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 241.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 237.4
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 217.7
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 187.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 183.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 180.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 176.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 161.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 161.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 159.9
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 148.2
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 144.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 141.0
GTEX-X261-3126-SM-4PQZC 50-59 years, male 138.7
GTEX-1192X-3226-SM-5987D 50-59 years, male 137.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 135.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 135.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 133.8
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 131.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 128.6
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 125.7
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 121.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 121.6
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 120.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 120.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 119.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 119.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 119.2
GTEX-12126-0926-SM-5FQTW 20-29 years, male 117.5
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 117.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 116.8
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 116.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 115.8
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 115.0
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 113.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 113.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 112.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 112.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 112.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 111.3
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 110.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 110.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 110.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 110.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 110.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 108.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 108.0
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 107.9
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 107.1
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 106.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 106.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 106.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 105.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 104.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 104.5
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 104.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 104.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 103.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 103.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 103.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 102.9
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 102.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 102.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 101.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 101.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 101.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 101.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 101.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 101.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 101.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 101.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 101.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 101.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 100.9
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 100.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 100.6
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 100.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 100.5
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 100.5
GTEX-14PN4-3026-SM-664O4 50-59 years, male 100.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 99.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 99.1
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 99.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 98.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 98.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 98.3
GTEX-14E6D-2926-SM-664OP 50-59 years, male 98.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 97.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 97.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 97.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 97.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 96.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 96.7
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 96.6
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 96.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 96.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 96.2
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 96.1
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 95.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 95.7
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 95.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 94.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 94.0
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 93.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 93.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 93.4
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 93.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 93.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 92.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 92.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 92.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 92.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 92.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 92.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 91.9
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 91.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 91.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 91.7
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 91.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 91.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 91.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 90.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 89.7
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 89.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 89.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 88.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 88.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 88.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 88.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 88.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 88.5
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 88.4
GTEX-1B933-3026-SM-731DB 50-59 years, female 88.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 88.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 87.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 87.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 87.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 87.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 87.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 87.2
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 87.0
GTEX-144GL-2926-SM-5O99F 50-59 years, male 86.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 86.6
GTEX-11DYG-2926-SM-5H132 60-69 years, male 86.5
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 86.4
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 86.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 86.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 85.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 85.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 85.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 85.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 85.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 85.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 85.1
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 85.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 84.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 84.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 84.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 83.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 83.8
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 83.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 83.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 83.4
GTEX-18465-2926-SM-7KFSE 50-59 years, male 83.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 82.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 82.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 82.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 82.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 82.4
GTEX-17EVP-2926-SM-793BU 40-49 years, male 82.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 82.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 81.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 81.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 81.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 81.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 81.1
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 80.9
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 80.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 80.4
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 80.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 80.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 79.9
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 79.8
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 79.2
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 78.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 78.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 78.6
GTEX-11NUK-3026-SM-5986K 50-59 years, male 78.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 78.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 78.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 77.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 77.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 77.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 77.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 76.8
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 75.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 75.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 75.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 75.4
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 75.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 74.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 74.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 74.3
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 74.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 73.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 72.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 72.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 72.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 72.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 72.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 70.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 69.8
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 69.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 68.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 68.8
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 68.5
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 68.5
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 67.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 67.8
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 67.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 67.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 67.0
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 65.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 64.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 64.2
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 64.0
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 63.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 62.3
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 61.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 61.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 60.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 60.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 58.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 54.9
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 52.0
GTEX-RU72-2926-SM-2TF66 50-59 years, female 51.7
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 48.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 47.2
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 47.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 44.1
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 40.8
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

300.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 300.6
FF:10166-103B4 76 years, female 431.3
FF:10083-102B2 22-68 years, mixed 170.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 36.5
Samples: 4

Max nTPM: 41.8
Min nTPM: 32.6
Sample A Female 41.8
Sample B Female 32.6
Sample C Male 34.1
Sample D Male 37.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.7
Mouse sample Sample description nTPM
Cerebellum
nTPM: 19.7
Samples: 4

Max nTPM: 22.0
Min nTPM: 18.5
Sample A Male 22.0
Sample B Male 18.5
Sample C Female 19.6
Sample D Female 18.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 10.9
68798903 Antisense, RP_050217_01_E10, Mouse strain C57BL/6J (56 days, male) 10.9

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