We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
72.4
nTPM
HPA Brain:
54.2
nTPM
GTEx:
72.4
nTPM
FANTOM5:
38.0
Scaled Tags Per Million
Pig:
8.8
nTPM
Mouse:
9.6
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.2
Sample id
Sample description
nTPM
Amygdala nTPM: 26.5
2517
Female, age 94, left hemisphere
40.7
1987
Female, age 91, left hemisphere
39.2
2514
Male, age 75, right hemisphere
34.3
2695
Female, age 67, right hemisphere
11.5
2814
Male, age 76, right hemisphere
6.6
Basal amygdala nTPM: 54.2
2243
Female, age 91, right hemisphere
85.1
2827
Female, age 67, right hemisphere
63.1
2110
Male, age 80, left hemisphere
56.4
2609
Male, age 75, right hemisphere
49.7
2685
Female, age 94, left hemisphere
48.4
1955
Male, age 76, both hemispheres
22.2
Central amygdala nTPM: 37.5
2239
Male, age 80, left hemisphere
75.0
2826
Female, age 94, left hemisphere
56.1
2515
Male, age 75, right hemisphere
31.7
2701
Female, age 91, right hemisphere
19.2
1905
Male, age 76, both hemispheres
5.6
Corticomedial amygdala nTPM: 51.2
2829
Male, age 80, left hemisphere
74.1
2535
Female, age 67, right hemisphere
64.0
2242
Female, age 91, right hemisphere
53.1
2428
Male, age 75, right hemisphere
52.6
2429
Female, age 94, left hemisphere
45.2
2240
Male, age 76, both hemispheres
18.2
Lateral amygdala nTPM: 47.6
2830
Female, age 67, right hemisphere
62.9
2256
Male, age 80, left hemisphere
54.9
2534
Female, age 94, left hemisphere
54.1
2255
Female, age 91, right hemisphere
53.9
2516
Male, age 75, right hemisphere
40.6
1883
Male, age 76, both hemispheres
19.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 72.4
Samples: 152
Max nTPM: 147.1
Min nTPM: 1.1
Std nTPM: 32.7
Median nTPM: 69.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
147.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
144.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
138.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
137.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
136.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
135.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
129.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
129.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
124.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
121.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
121.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
120.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
117.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
117.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
116.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
116.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
116.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
116.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
116.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
116.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
115.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
113.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
113.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
112.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
111.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
109.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
107.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
106.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
104.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
103.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
102.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
101.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
100.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
100.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
99.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
99.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
98.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
97.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
96.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
96.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
96.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
95.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
95.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
95.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
95.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
93.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
93.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
92.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
92.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
90.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
89.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
86.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
85.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
85.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
84.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
84.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
82.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
81.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
81.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
78.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
78.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
78.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
77.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
77.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
77.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
76.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
73.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
73.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
73.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
72.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
71.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
70.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
70.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
70.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
70.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
69.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
69.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
68.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
67.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
66.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
65.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
65.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
65.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
64.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
64.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
63.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
63.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
63.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
62.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
62.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
62.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
61.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
61.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
61.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
61.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
60.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
59.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
58.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
54.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
54.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
53.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
53.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
53.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
52.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
48.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
47.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
46.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
45.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
45.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
44.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
44.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
44.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
43.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
43.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
42.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
42.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
41.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
41.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
41.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
40.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
39.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
38.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
38.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
37.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
36.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
36.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
35.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
34.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
32.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
30.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
30.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
30.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
27.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
26.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
24.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
24.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
23.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
21.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
21.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
14.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
11.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
8.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.1
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 9.6
Samples: 4
Max nTPM: 11.6
Min nTPM: 6.8
Sample A
Male
8.4
Sample B
Male
6.8
Sample C
Female
11.6
Sample D
Female
11.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
