PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:188.1 nTPM
FANTOM5:151.2 Scaled Tags Per Million
Pig:115.0 nTPM
Mouse:3.9 nTPM
Allen mouse:3.6 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 188.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 156.4
2301 Female, age 85, both hemispheres 169.8
2090 Male, age 80, both hemispheres 162.0
1984 Male, age 76, both hemispheres 150.1
2188 Female, age 91, both hemispheres 143.8
Area postrema
nTPM: 167.3
2799 Male, age 61, both hemispheres 198.8
2306 Male, age 80, both hemispheres 178.4
2054 Male, age 76, both hemispheres 124.8
Dorsal cochlear nucleus
nTPM: 157.1
2802 Male, age 74, right hemisphere 177.3
2378 Male, age 80, both hemispheres 164.4
2187 Female, age 91, both hemispheres 155.4
2370 Male, age 61, both hemispheres 148.0
2058 Male, age 76, both hemispheres 140.1
Dorsal medullary reticular nucleus
nTPM: 140.4
2373 Male, age 61, both hemispheres 150.2
2088 Male, age 76, both hemispheres 140.3
2040 Female, age 85, both hemispheres 130.8
Dorsal motor vagal complex
nTPM: 160.2
2643 Male, age 74, both hemispheres 205.8
2797 Male, age 61, both hemispheres 199.5
2185 Male, age 76, both hemispheres 168.0
2807 Female, age 85, both hemispheres 149.7
2813 Female, age 72, unknown 143.1
2844 Male, age 55, unknown 140.5
2133 Female, age 91, both hemispheres 139.3
2000 Male, age 74, unknown 135.7
Dorsal tegmental nucleus
nTPM: 158.4
2358 Male, age 61, both hemispheres 177.6
2326 Male, age 74, both hemispheres 153.6
2083 Male, age 80, both hemispheres 152.3
1936 Male, age 76, left hemisphere 150.1
Dorsolateral tegmental area
nTPM: 148.6
2337 Male, age 61, both hemispheres 203.5
2654 Male, age 80, both hemispheres 148.5
2751 Female, age 85, both hemispheres 132.2
2141 Male, age 76, both hemispheres 130.9
2360 Male, age 74, both hemispheres 128.2
Gigantocellular reticular nuclei, medullary
nTPM: 137.7
2314 Male, age 61, both hemispheres 185.4
2310 Male, age 80, both hemispheres 141.3
2022 Male, age 76, right hemisphere 127.7
1876 Female, age 85, both hemispheres 127.2
2462 Male, age 74, both hemispheres 126.1
2387 Female, age 91, both hemispheres 118.3
Gigantocellular reticular nuclei, pars
nTPM: 140.5
2330 Male, age 80, both hemispheres 147.9
2336 Male, age 61, both hemispheres 146.3
2706 Male, age 80, both hemispheres 140.5
2168 Male, age 76, both hemispheres 134.4
2084 Female, age 85, both hemispheres 133.2
Inferior olive
nTPM: 188.1
2178 Male, age 61, both hemispheres 199.2
2628 Female, age 91, both hemispheres 197.2
2085 Female, age 85, both hemispheres 187.8
2563 Male, age 74, both hemispheres 180.8
2379 Male, age 80, both hemispheres 175.7
Kolliker-Fuse nucleus
nTPM: 143.8
2315 Male, age 76, right hemisphere 155.1
2793 Female, age 91, left hemisphere 142.0
2163 Male, age 80, both hemispheres 134.1
Lateral lemniscal nuclei
nTPM: 118.9
2169 Male, age 76, both hemispheres 136.1
2746 Female, age 85, left hemisphere 134.2
2320 Female, age 91, left hemisphere 122.6
2453 Male, age 74, right hemisphere 122.2
2036 Male, age 80, both hemispheres 79.5
Lateral medullary reticular nucleus
nTPM: 166.8
2374 Male, age 61, both hemispheres 195.6
2804 Female, age 91, both hemispheres 180.5
2852 Male, age 80, both hemispheres 168.0
2305 Male, age 74, both hemispheres 156.8
2190 Female, age 85, both hemispheres 154.8
2044 Male, age 76, both hemispheres 145.5
Lateral parabrachial nucleus
nTPM: 141.1
2013 Male, age 80, both hemispheres 150.4
2139 Female, age 85, right hemisphere 147.6
2792 Male, age 76, both hemispheres 145.2
2790 Male, age 61, both hemispheres 121.0
Lateral vestibular nucleus
nTPM: 157.5
2311 Male, age 80, both hemispheres 173.2
2184 Male, age 76, both hemispheres 141.8
Locus coeruleus
nTPM: 116.1
2720 Male, age 74, both hemispheres 137.6
2123 Female, age 91, both hemispheres 134.0
2162 Male, age 80, both hemispheres 126.8
2317 Female, age 72, unknown 112.5
1980 Male, age 76, both hemispheres 111.9
2014 Male, age 55, unknown 100.9
2788 Male, age 74, unknown 88.8
Medial olivary nucleus
nTPM: 174.6
1943 Male, age 61, both hemispheres 193.0
2138 Female, age 91, both hemispheres 187.3
2851 Male, age 80, both hemispheres 168.6
1962 Male, age 76, both hemispheres 149.5
Medial parabrachial nucleus
nTPM: 144.6
2170 Female, age 91, both hemispheres 161.1
2156 Male, age 61, both hemispheres 143.6
2463 Female, age 85, right hemisphere 142.3
2854 Male, age 80, both hemispheres 140.8
2786 Male, age 76, both hemispheres 135.4
Medial periolivary nuclei
nTPM: 133.3
2081 Male, age 80, both hemispheres 150.4
2063 Male, age 76, both hemispheres 143.7
2458 Female, age 91, both hemispheres 128.8
2171 Female, age 85, both hemispheres 127.9
2791 Male, age 74, right hemisphere 115.5
Medial vestibular nucleus
nTPM: 144.6
2624 Male, age 61, both hemispheres 180.5
2801 Male, age 74, both hemispheres 145.7
2803 Female, age 91, both hemispheres 138.3
2743 Female, age 85, both hemispheres 137.6
2093 Male, age 80, both hemispheres 136.3
2134 Male, age 76, both hemispheres 129.4
Motor facial nucleus
nTPM: 137.1
2126 Male, age 61, both hemispheres 147.0
2062 Male, age 76, both hemispheres 142.0
2697 Female, age 85, both hemispheres 138.2
2795 Female, age 91, both hemispheres 137.9
2327 Male, age 80, both hemispheres 129.9
2365 Male, age 74, right hemisphere 127.4
Motor hypoglossal nucleus
nTPM: 146.8
2182 Male, age 80, both hemispheres 186.5
2125 Female, age 91, both hemispheres 154.6
2461 Male, age 61, both hemispheres 140.8
2132 Female, age 85, both hemispheres 135.7
2277 Male, age 76, both hemispheres 116.4
Motor trigeminal nucleus
nTPM: 140.5
2335 Male, age 61, both hemispheres 158.4
2321 Female, age 91, both hemispheres 146.1
2560 Male, age 74, both hemispheres 145.9
2079 Male, age 80, both hemispheres 131.8
2309 Male, age 76, both hemispheres 120.5
Nuclei of the trapezoid body
nTPM: 132.1
1983 Male, age 76, both hemispheres 153.7
2166 Male, age 80, both hemispheres 139.1
2368 Female, age 91, both hemispheres 124.6
2159 Male, age 61, both hemispheres 121.7
2735 Female, age 85, both hemispheres 121.3
Nucleus ambiguus
nTPM: 158.9
2096 Female, age 85, both hemispheres 159.3
2071 Male, age 76, both hemispheres 158.4
Nucleus cuneatus
nTPM: 159.8
2564 Male, age 74, both hemispheres 191.6
2805 Female, age 91, both hemispheres 178.3
2100 Male, age 76, both hemispheres 164.4
2380 Male, age 80, both hemispheres 159.6
2131 Male, age 76, both hemispheres 154.4
2562 Male, age 61, both hemispheres 154.4
2808 Female, age 85, both hemispheres 149.5
2381 Male, age 80, both hemispheres 143.0
2376 Male, age 61, both hemispheres 142.6
Nucleus gracilis
nTPM: 172.8
2627 Male, age 74, both hemispheres 184.9
2299 Female, age 85, both hemispheres 174.9
2382 Male, age 80, both hemispheres 158.6
Nucleus raphe magnus
nTPM: 131.1
2051 Male, age 76, both hemispheres 157.5
2328 Male, age 80, both hemispheres 138.2
2172 Female, age 85, both hemispheres 125.8
2455 Male, age 74, both hemispheres 125.4
2160 Male, age 61, both hemispheres 120.6
2459 Female, age 91, both hemispheres 119.3
Nucleus raphe obscurus
nTPM: 152.8
2142 Male, age 76, midline 162.6
2845 Female, age 85, midline 156.0
2800 Male, age 61, midline 139.7
Nucleus raphe pallidus
nTPM: 164.2
1924 Male, age 61, midline 178.5
2145 Male, age 76, midline 165.2
2183 Male, age 80, midline 149.0
Nucleus tractus solitarii
nTPM: 130.8
2307 Male, age 80, both hemispheres 166.4
2191 Female, age 85, both hemispheres 141.7
2656 Male, age 76, both hemispheres 115.7
2144 Female, age 91, right hemisphere 99.5
Paramedian reticular nucleus
nTPM: 120.7
2057 Male, age 80, both hemispheres 126.1
2050 Female, age 85, both hemispheres 125.9
2313 Male, age 61, both hemispheres 117.2
2052 Male, age 76, both hemispheres 113.7
Parvicellular reticular nuclei
nTPM: 139.4
2095 Male, age 76, both hemispheres 144.0
2558 Male, age 74, both hemispheres 137.8
2119 Male, age 80, both hemispheres 136.3
Parvicellular reticular nuclei, medullary
nTPM: 145.1
2091 Female, age 85, both hemispheres 153.7
2189 Female, age 91, both hemispheres 143.6
2181 Male, age 80, left hemisphere 138.1
Pedunculopontine tegmental nucleus
nTPM: 135.9
2338 Male, age 61, both hemispheres 141.3
2334 Male, age 80, both hemispheres 134.6
1921 Female, age 85, both hemispheres 131.8
Peritrigeminal nucleus
nTPM: 154.3
2067 Female, age 85, both hemispheres 162.7
2136 Male, age 76, both hemispheres 150.3
2179 Male, age 61, both hemispheres 149.9
Pontine nuclei
nTPM: 140.4
1968 Male, age 76, left hemisphere 160.2
2115 Male, age 80, left hemisphere 157.7
1863 Male, age 55, unknown 155.7
2787 Female, age 85, both hemispheres 153.2
2109 Female, age 72, unknown 137.9
2319 Female, age 91, both hemispheres 137.2
2454 Male, age 74, left hemisphere 111.0
2727 Male, age 61, right hemisphere 110.4
Pontine raphe nucleus
nTPM: 128.9
2122 Female, age 85, midline 130.3
2853 Male, age 76, midline 127.5
Posteroventral cochlear nucleus
nTPM: 142.6
2371 Male, age 61, both hemispheres 152.3
2135 Female, age 91, both hemispheres 150.3
2341 Male, age 80, both hemispheres 147.9
2070 Male, age 76, both hemispheres 134.9
2752 Female, age 85, both hemispheres 127.6
Prepositus hypoglossal nucleus
nTPM: 148.6
2086 Male, age 80, both hemispheres 155.4
2855 Female, age 85, right hemisphere 141.7
Principal sensory trigeminal nucleus
nTPM: 133.2
2324 Male, age 76, both hemispheres 148.2
2367 Female, age 91, left hemisphere 136.4
2158 Male, age 61, both hemispheres 128.7
2008 Male, age 80, left hemisphere 119.5
Reticular pontine nucleus, caudal
nTPM: 139.4
2559 Male, age 74, both hemispheres 149.8
2092 Male, age 76, both hemispheres 139.9
2457 Female, age 91, both hemispheres 139.8
2332 Male, age 80, right hemisphere 128.2
Reticular pontine nucleus, oral
nTPM: 128.6
2167 Male, age 76, both hemispheres 143.9
1939 Male, age 80, both hemispheres 129.1
2012 Female, age 85, both hemispheres 127.0
2361 Male, age 74, both hemispheres 122.1
2366 Female, age 91, both hemispheres 121.1
Reticulotegmental nucleus
nTPM: 140.5
2322 Female, age 91, both hemispheres 153.9
2452 Male, age 74, both hemispheres 149.0
2333 Male, age 80, both hemispheres 134.5
2325 Male, age 76, both hemispheres 124.5
Spinal trigeminal nucleus, caudal
nTPM: 159.5
2447 Male, age 76, both hemispheres 167.6
2308 Male, age 80, both hemispheres 165.9
2312 Male, age 61, both hemispheres 165.6
2642 Male, age 74, both hemispheres 161.5
2390 Female, age 91, both hemispheres 136.8
Spinal trigeminal nucleus, interpolar
nTPM: 139.6
2625 Male, age 61, both hemispheres 149.2
2033 Male, age 80, both hemispheres 148.4
2066 Male, age 76, right hemisphere 136.2
2386 Female, age 85, both hemispheres 133.2
2389 Female, age 91, both hemispheres 131.1
Spinal trigeminal nucleus, oral
nTPM: 147.6
1978 Male, age 76, both hemispheres 157.5
2164 Male, age 80, both hemispheres 156.9
2737 Female, age 85, both hemispheres 128.6
Spinal vestibular nucleus
nTPM: 146.0
2384 Male, age 74, both hemispheres 163.7
2796 Male, age 61, both hemispheres 152.6
2780 Male, age 80, both hemispheres 148.1
2748 Male, age 76, both hemispheres 144.1
2806 Female, age 85, both hemispheres 138.2
2186 Female, age 91, both hemispheres 129.6
Subcoeruleus area
nTPM: 134.4
2451 Male, age 74, both hemispheres 148.8
2089 Male, age 76, left hemisphere 136.8
2369 Female, age 85, left hemisphere 130.5
2323 Female, age 91, left hemisphere 128.6
1958 Male, age 80, both hemispheres 127.2
Superior olive
nTPM: 134.1
2020 Male, age 76, both hemispheres 144.6
2329 Male, age 80, right hemisphere 138.3
2561 Female, age 91, both hemispheres 132.8
2364 Male, age 74, right hemisphere 127.6
1875 Female, age 85, both hemispheres 126.9
Superior vestibular nucleus
nTPM: 148.5
2061 Male, age 76, both hemispheres 162.5
2015 Male, age 80, both hemispheres 150.2
2383 Male, age 74, both hemispheres 132.9
Ventral medullary reticular nucleus
nTPM: 144.6
2372 Male, age 61, both hemispheres 159.4
2060 Male, age 76, both hemispheres 129.7
Ventral periolivary nuclei
nTPM: 129.5
2130 Female, age 85, both hemispheres 143.1
2165 Male, age 80, both hemispheres 136.1
2023 Male, age 76, both hemispheres 129.0
2794 Female, age 91, left hemisphere 109.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 161.6
2302 Female, age 91, both hemispheres 188.0
2180 Male, age 61, both hemispheres 171.1
2118 Male, age 80, both hemispheres 167.2
2741 Female, age 85, both hemispheres 148.7
1986 Male, age 76, both hemispheres 133.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 135.4
2840 Female, age 85, both hemispheres 147.8
2161 Male, age 80, both hemispheres 144.0
2456 Female, age 91, both hemispheres 135.2
1959 Male, age 76, both hemispheres 131.4
2359 Male, age 61, both hemispheres 131.3
2449 Male, age 74, both hemispheres 122.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 151.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 151.2
FF:10182-103D2 60 years, female 155.9
FF:10165-103B3 76 years, female 146.5
Medulla oblongata
Scaled Tags Per Million: 129.9
FF:10155-103A2 76 years, female 169.4
FF:10038-101F2 18-64 years, mixed 132.1
FF:10174-103C3 60 years, female 88.3
Pons
Scaled Tags Per Million: 101.4
FF:10033-101E6 18-54 years, mixed 101.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 115.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 115.1
Samples: 4

Max nTPM: 129.1
Min nTPM: 99.1
Sample A Female 99.1
Sample B Female 109.8
Sample C Male 129.1
Sample D Male 122.2
Pons
nTPM: 106.6
Samples: 4

Max nTPM: 127.4
Min nTPM: 78.9
Sample A Female 109.4
Sample B Female 78.9
Sample C Male 110.8
Sample D Male 127.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 3.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 3.9
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.5
Sample A Male 4.5
Sample B Male 3.7
Sample C Female 3.9
Sample D Female 3.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.6
79544866 Antisense, RP_071101_01_A12, Mouse strain C57BL/6J (56 days, male) 3.6
Pons
Expression energy: 3.6
79544866 Antisense, RP_071101_01_A12, Mouse strain C57BL/6J (56 days, male) 3.6

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