HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:128.5 nTPM
HPA Brain:119.2 nTPM
GTEx:128.5 nTPM
FANTOM5:80.1 Scaled Tags Per Million
Pig:128.5 nTPM
Mouse:137.7 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012612
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 119.2
Sample id Sample description nTPM
Hippocampus
nTPM: 96.4
2529 Female, age 94, left hemisphere 118.7
1898 Male, age 80, left hemisphere 103.7
1911 Female, age 85, right hemisphere 98.9
2148 Female, age 91, left hemisphere 91.9
2621 Female, age 67, right hemisphere 90.3
1855 Male, age 76, left hemisphere 74.6
Dentate gyrus
nTPM: 87.5
2530 Female, age 94, left hemisphere 127.5
2528 Male, age 74, both hemispheres 98.3
2246 Female, age 85, both hemispheres 80.7
2010 Male, age 76, both hemispheres 80.0
1927 Female, age 91, both hemispheres 70.6
2531 Female, age 67, both hemispheres 67.8
Entorhinal gyrus
nTPM: 119.2
2117 Female, age 91, right hemisphere 155.8
2764 Male, age 80, right hemisphere 122.9
1938 Female, age 85, left hemisphere 116.9
2613 Female, age 94, left hemisphere 114.2
2686 Male, age 75, right hemisphere 106.3
1787 Male, age 76, left hemisphere 99.0
Hippocampus, CA1
nTPM: 81.7
2527 Male, age 74, both hemispheres 101.9
2082 Female, age 91, right hemisphere 90.4
1873 Female, age 85, both hemispheres 85.6
2749 Male, age 80, left hemisphere 85.5
2045 Male, age 76, both hemispheres 44.8
Hippocampus, CA2
nTPM: 96.2
2437 Female, age 94, left hemisphere 109.7
2249 Male, age 74, both hemispheres 109.4
2113 Female, age 91, right hemisphere 95.8
1963 Male, age 80, left hemisphere 94.4
1940 Female, age 85, left hemisphere 88.2
1892 Male, age 76, both hemispheres 79.9
Hippocampus, CA3
nTPM: 81.8
1891 Female, age 85, both hemispheres 111.3
1867 Male, age 76, both hemispheres 89.9
2436 Male, age 74, both hemispheres 86.1
2861 Female, age 67, both hemispheres 77.0
2620 Female, age 94, left hemisphere 65.4
2137 Male, age 80, left hemisphere 61.0
Parahippocampal cortex
nTPM: 93.7
2692 Male, age 74, both hemispheres 118.8
1990 Female, age 91, right hemisphere 110.1
1933 Female, age 85, both hemispheres 100.0
2250 Female, age 67, right hemisphere 94.8
1850 Male, age 80, both hemispheres 94.7
2532 Female, age 72, left hemisphere 94.2
2245 Female, age 91, both hemispheres 91.4
2018 Male, age 76, both hemispheres 82.4
2622 Female, age 67, right hemisphere 76.3
2693 Female, age 94, both hemispheres 74.6
Perirhinal gyrus
nTPM: 79.8
1847 Female, age 91, left hemisphere 89.5
1794 Male, age 80, right hemisphere 83.1
1841 Female, age 85, right hemisphere 79.0
2848 Male, age 76, right hemisphere 74.4
2521 Female, age 94, right hemisphere 72.9
Subiculum
nTPM: 113.1
1901 Male, age 80, both hemispheres 123.0
2042 Male, age 76, both hemispheres 119.8
1977 Female, age 85, both hemispheres 119.0
2438 Female, age 94, left hemisphere 111.8
2619 Male, age 74, both hemispheres 110.5
2729 Female, age 91, right hemisphere 94.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 128.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 128.5
Samples: 197

Max nTPM: 249.1
Min nTPM: 46.7
Std nTPM: 35.0
Median nTPM: 127.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 249.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 242.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 236.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 220.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 220.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 214.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 213.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 202.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 193.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 192.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 190.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 80.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.1
FF:10153-102I9 76 years, female 95.9
FF:10169-103B7 60 years, female 64.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 128.5
Pig sample Sample description nTPM
Subiculum
nTPM: 100.9
Samples: 4

Max nTPM: 129.1
Min nTPM: 87.5
Sample A Female 129.1
Sample B Female 94.5
Sample C Male 92.4
Sample D Male 87.5
Dorsal hippocampus
nTPM: 128.5
Samples: 4

Max nTPM: 172.8
Min nTPM: 66.3
Sample A Female 172.8
Sample B Female 114.6
Sample C Male 160.4
Sample D Male 66.3
Entorhinal cortex
nTPM: 117.1
Samples: 4

Max nTPM: 139.6
Min nTPM: 102.2
Sample A Female 104.7
Sample B Female 139.6
Sample C Male 122.0
Sample D Male 102.2
Ventral hippocampus
nTPM: 122.3
Samples: 4

Max nTPM: 152.5
Min nTPM: 85.2
Sample A Female 125.9
Sample B Female 85.2
Sample C Male 152.5
Sample D Male 125.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 137.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 137.7
Samples: 4

Max nTPM: 150.8
Min nTPM: 122.9
Sample A Male 150.8
Sample B Male 147.9
Sample C Female 122.9
Sample D Female 129.1
Hippocampal formation
nTPM: 111.9
Samples: 4

Max nTPM: 122.0
Min nTPM: 103.5
Sample A Male 103.5
Sample B Male 105.6
Sample C Female 116.5
Sample D Female 122.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
69735299 Antisense, RP_050503_02_E05, Mouse strain C57BL/6J (56 days, male) 12.5

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