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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:218.5 nTPM
FANTOM5:359.7 Scaled Tags Per Million
Pig:65.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029193Antibody CAB025430
Glial cells HighHigh
Neuronal cells LowMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 218.5
Samples: 246

Max nTPM: 542.8
Min nTPM: 35.1
Std nTPM: 80.1
Median nTPM: 206.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 542.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 471.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 426.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 397.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 390.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 384.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 383.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 381.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 380.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 377.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 364.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 362.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 360.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 354.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 353.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 351.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 351.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 350.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 346.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 346.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 346.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 342.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 341.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 336.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 336.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 335.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 329.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 329.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 329.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 326.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 322.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 320.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 314.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 314.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 314.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 314.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 312.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 312.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 309.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 309.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 307.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 307.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 306.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 302.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 291.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 289.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 288.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 287.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 286.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 285.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 281.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 280.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 279.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 277.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 277.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 273.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 272.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 270.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 270.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 268.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 265.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 264.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 262.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 262.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 262.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 261.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 261.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 260.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 260.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 260.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 260.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 259.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 257.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 256.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 255.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 253.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 252.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 244.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 242.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 241.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 240.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 239.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 236.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 235.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 235.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 235.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 235.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 233.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 232.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 231.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 230.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 230.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 229.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 228.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 228.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 226.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 226.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 222.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 221.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 221.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 220.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 219.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 219.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 216.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 216.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 215.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 214.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 213.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 213.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 213.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 212.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 212.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 211.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 211.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 211.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 210.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 210.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 208.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 208.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 207.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 206.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 206.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 206.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 205.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 205.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 204.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 203.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 203.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 202.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 201.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 201.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 201.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 201.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 200.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 199.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 199.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 194.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 194.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 194.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 193.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 193.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 193.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 191.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 189.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 189.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 187.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 186.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 185.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 184.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 184.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 182.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 181.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 181.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 181.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 181.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 180.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 180.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 180.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 179.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 179.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 178.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 178.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 178.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 177.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 176.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 176.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 175.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 175.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 174.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 172.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 172.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 171.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 171.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 170.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 170.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 169.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 169.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 168.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 164.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 164.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 164.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 163.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 162.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 162.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 162.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 161.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 159.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 159.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 158.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 158.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 155.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 152.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 151.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 151.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 150.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 148.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 146.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 145.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 144.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 143.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 142.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 140.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 139.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 139.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 139.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 138.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 138.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 137.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 137.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 137.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 135.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 135.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 134.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 134.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 133.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 132.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 132.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 132.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 132.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 131.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 131.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 130.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 129.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 128.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 125.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 123.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 122.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 122.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 116.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 115.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 113.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 108.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 104.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 97.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 90.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 87.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 82.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 75.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 68.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

359.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 359.7
FF:10164-103B2 76 years, female 359.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.8
Pig sample Sample description nTPM
Caudate
nTPM: 65.8
Samples: 4

Max nTPM: 72.4
Min nTPM: 62.6
Sample A Female 63.8
Sample B Female 64.5
Sample C Male 72.4
Sample D Male 62.6

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