We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
IMPDH1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • IMPDH1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

IMPDH1
Synonyms LCA11, RP10, sWSS2608
Gene descriptioni

Full gene name according to HGNC.

Inosine monophosphate dehydrogenase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
FDA approved drug targets
Human disease related genes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q32.1
Chromosome location (bp) 128392277 - 128410252
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000106348 (version 109)
Entrez gene 3614
HGNC HGNC:6052
UniProt P20839 (UniProt - Evidence at protein level)
neXtProt NX_P20839
GeneCards IMPDH1
Antibodypedia IMPDH1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Could also have a single-stranded nucleic acid-binding activity and could play a role in RNA and/or DNA metabolism. It may also have a role in the development of malignancy and the growth progression of some tumors.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

DNA-binding, Oxidoreductase, RNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

GMP biosynthesis, Purine biosynthesis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, NAD, Potassium
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene acts as a homotetramer to regulate cell growth. The encoded protein is an enzyme that catalyzes the synthesis of xanthine monophosphate (XMP) from inosine-5'-monophosphate (IMP). This is the rate-limiting step in the de novo synthesis of guanine nucleotides. Defects in this gene are a cause of retinitis pigmentosa type 10 (RP10). Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
IMPDH1-201
ENSP00000345096
ENST00000338791
P20839
[Direct mapping] Inosine-5'-monophosphate dehydrogenase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0006183 [GTP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0046872 [metal ion binding]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
599 aa
64.3 kDa
No 0
IMPDH1-202
ENSP00000265385
ENST00000348127
P20839
[Direct mapping] Inosine-5'-monophosphate dehydrogenase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0006183 [GTP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0042802 [identical protein binding]
GO:0046872 [metal ion binding]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
563 aa
60.4 kDa
No 0
IMPDH1-203
ENSP00000346219
ENST00000354269
P20839
[Direct mapping] Inosine-5'-monophosphate dehydrogenase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0006183 [GTP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0046872 [metal ion binding]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
589 aa
63.3 kDa
No 0
IMPDH1-204
ENSP00000399400
ENST00000419067
P20839
[Direct mapping] Inosine-5'-monophosphate dehydrogenase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0006183 [GTP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0046872 [metal ion binding]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
566 aa
60.9 kDa
No 0
IMPDH1-208
ENSP00000417296
ENST00000470772
C9J381
[Direct mapping] Inosine-5'-monophosphate dehydrogenase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Eye disease
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0046872 [metal ion binding]
Show all
513 aa
55.3 kDa
No 0
IMPDH1-210
ENSP00000420185
ENST00000480861
P20839
[Direct mapping] Inosine-5'-monophosphate dehydrogenase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0006183 [GTP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0046872 [metal ion binding]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
509 aa
54.8 kDa
No 0
IMPDH1-212
ENSP00000418592
ENST00000489263
C9J029
[Direct mapping] IMP dehydrogenase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Eye disease
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0016491 [oxidoreductase activity]
Show all
184 aa
19.5 kDa
No 0
IMPDH1-214
ENSP00000420803
ENST00000496200
P20839
[Direct mapping] Inosine-5'-monophosphate dehydrogenase 1
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0006183 [GTP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0034774 [secretory granule lumen]
GO:0035578 [azurophil granule lumen]
GO:0046872 [metal ion binding]
GO:1904813 [ficolin-1-rich granule lumen]
Show all
489 aa
52.6 kDa
No 0
IMPDH1-216
ENSP00000419609
ENST00000497868
C9K0R9
[Direct mapping] IMP dehydrogenase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Eye disease
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0016491 [oxidoreductase activity]
Show all
289 aa
31.2 kDa
No 0
IMPDH1-217
ENSP00000486056
ENST00000626419
C9J381
[Direct mapping] Inosine-5'-monophosphate dehydrogenase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Eye disease
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0046872 [metal ion binding]
Show all
513 aa
55.3 kDa
No 0
IMPDH1-218
ENSP00000496892
ENST00000648462
A0A3B3IRL5
[Direct mapping] Inosine-5'-monophosphate dehydrogenase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Eye disease
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0003938 [IMP dehydrogenase activity]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006177 [GMP biosynthetic process]
GO:0016491 [oxidoreductase activity]
GO:0046872 [metal ion binding]
Show all
509 aa
54.3 kDa
No 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org