HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.1 nTPM
HPA Brain:9.7 nTPM
GTEx:28.1 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:28.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019054
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.7
Sample id Sample description nTPM
Hippocampus
nTPM: 8.0
1911 Female, age 85, right hemisphere 9.4
1855 Male, age 76, left hemisphere 8.7
2529 Female, age 94, left hemisphere 8.6
1898 Male, age 80, left hemisphere 8.0
2148 Female, age 91, left hemisphere 7.5
2621 Female, age 67, right hemisphere 5.9
Dentate gyrus
nTPM: 8.2
2246 Female, age 85, both hemispheres 9.7
2528 Male, age 74, both hemispheres 9.5
2530 Female, age 94, left hemisphere 8.9
1927 Female, age 91, both hemispheres 7.7
2010 Male, age 76, both hemispheres 7.4
2531 Female, age 67, both hemispheres 6.2
Entorhinal gyrus
nTPM: 8.6
2613 Female, age 94, left hemisphere 10.0
1938 Female, age 85, left hemisphere 9.5
2117 Female, age 91, right hemisphere 8.4
1787 Male, age 76, left hemisphere 8.3
2764 Male, age 80, right hemisphere 8.1
2686 Male, age 75, right hemisphere 7.1
Hippocampus, CA1
nTPM: 8.8
1873 Female, age 85, both hemispheres 9.7
2527 Male, age 74, both hemispheres 9.7
2082 Female, age 91, right hemisphere 9.4
2749 Male, age 80, left hemisphere 8.7
2045 Male, age 76, both hemispheres 6.8
Hippocampus, CA2
nTPM: 8.3
2249 Male, age 74, both hemispheres 10.8
2113 Female, age 91, right hemisphere 8.7
1892 Male, age 76, both hemispheres 8.3
1940 Female, age 85, left hemisphere 7.8
2437 Female, age 94, left hemisphere 7.7
1963 Male, age 80, left hemisphere 6.8
Hippocampus, CA3
nTPM: 8.4
2137 Male, age 80, left hemisphere 10.6
2436 Male, age 74, both hemispheres 9.5
1891 Female, age 85, both hemispheres 8.9
1867 Male, age 76, both hemispheres 8.1
2620 Female, age 94, left hemisphere 6.6
2861 Female, age 67, both hemispheres 6.6
Parahippocampal cortex
nTPM: 9.7
2250 Female, age 67, right hemisphere 12.7
2693 Female, age 94, both hemispheres 12.0
2692 Male, age 74, both hemispheres 10.5
1933 Female, age 85, both hemispheres 10.0
1990 Female, age 91, right hemisphere 9.7
2245 Female, age 91, both hemispheres 9.4
1850 Male, age 80, both hemispheres 9.0
2532 Female, age 72, left hemisphere 8.8
2622 Female, age 67, right hemisphere 7.8
2018 Male, age 76, both hemispheres 7.0
Perirhinal gyrus
nTPM: 8.8
1841 Female, age 85, right hemisphere 9.6
2521 Female, age 94, right hemisphere 9.6
2848 Male, age 76, right hemisphere 9.2
1847 Female, age 91, left hemisphere 8.5
1794 Male, age 80, right hemisphere 7.2
Subiculum
nTPM: 8.4
1901 Male, age 80, both hemispheres 9.7
1977 Female, age 85, both hemispheres 8.5
2438 Female, age 94, left hemisphere 8.4
2042 Male, age 76, both hemispheres 8.3
2729 Female, age 91, right hemisphere 8.3
2619 Male, age 74, both hemispheres 7.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 28.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.1
Samples: 197

Max nTPM: 99.3
Min nTPM: 15.2
Std nTPM: 8.2
Median nTPM: 27.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 52.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 51.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 43.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 41.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 40.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 39.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 39.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 25.8
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 12.0
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 16.9
Min nTPM: 9.9
Sample A Female 16.9
Sample B Female 9.9
Sample C Male 10.0
Sample D Male 11.2
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.7
Sample A Female 13.1
Sample B Female 9.7
Sample C Male 12.7
Sample D Male 10.8
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.5
Sample A Female 9.5
Sample B Female 12.1
Sample C Male 12.8
Sample D Male 9.7
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.4
Sample A Female 12.4
Sample B Female 11.7
Sample C Male 9.4
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 32.9
Min nTPM: 23.6
Sample A Male 26.2
Sample B Male 29.5
Sample C Female 32.9
Sample D Female 23.6
Hippocampal formation
nTPM: 28.8
Samples: 4

Max nTPM: 38.5
Min nTPM: 24.0
Sample A Male 38.5
Sample B Male 25.3
Sample C Female 24.0
Sample D Female 27.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69117164 Antisense, RP_050321_01_H06, Mouse strain C57BL/6J (56 days, male) 0.0

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