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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:69.9 nTPM
HPA Brain:78.2 nTPM
GTEx:69.9 nTPM
FANTOM5:101.4 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:75.2 nTPM
Allen mouse:1.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019043
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 65.3
2846 Female, age 79, unknown 70.8
2481 Female, age 94, left hemisphere 69.7
1857 Female, age 85, left hemisphere 68.7
2290 Female, age 72, unknown 66.7
1781 Male, age 74, unknown 66.1
1854 Male, age 80, left hemisphere 66.0
2289 Male, age 61, right hemisphere 57.2
2288 Male, age 75, left hemisphere 57.0
Globus pallidus, externus
nTPM: 77.2
1996 Male, age 80, right hemisphere 90.6
2772 Female, age 79, unknown 85.5
2395 Male, age 75, both hemispheres 79.4
2646 Male, age 61, right hemisphere 73.4
2567 Female, age 72, unknown 57.0
Globus pallidus, internus
nTPM: 78.2
2483 Female, age 94, right hemisphere 85.4
2287 Male, age 75, right hemisphere 84.1
2778 Female, age 91, both hemispheres 82.6
2037 Male, age 80, right hemisphere 78.9
1818 Male, age 74, unknown 76.6
2111 Female, age 85, right hemisphere 71.9
2566 Female, age 72, unknown 67.9
Nucleus accumbens
nTPM: 70.1
2698 Female, age 72, unknown 78.8
1806 Female, age 85, left hemisphere 76.9
1856 Female, age 91, right hemisphere 75.9
1783 Male, age 74, unknown 71.6
2391 Female, age 94, left hemisphere 70.8
2286 Male, age 75, left hemisphere 66.7
2824 Male, age 61, right hemisphere 62.0
2732 Male, age 80, right hemisphere 58.4
Nucleus basalis of Meynert
nTPM: 66.2
2569 Male, age 61, both hemispheres 80.2
2484 Female, age 94, left hemisphere 68.6
2393 Male, age 80, right hemisphere 58.8
2821 Male, age 75, both hemispheres 57.2
Nucleus of the diagonal band
nTPM: 53.3
1812 Female, age 91, both hemispheres 69.3
2775 Male, age 80, right hemisphere 53.7
1979 Male, age 74, unknown 50.5
2195 Female, age 85, both hemispheres 48.5
2029 Male, age 61, right hemisphere 44.6
Putamen
nTPM: 62.5
2482 Female, age 94, left hemisphere 74.6
2466 Female, age 79, unknown 65.1
1937 Female, age 91, right hemisphere 63.6
2647 Male, age 75, left hemisphere 63.1
1838 Male, age 80, right hemisphere 59.8
2489 Female, age 72, unknown 56.4
1829 Male, age 74, unknown 54.7
Septal nuclei
nTPM: 53.1
1960 Male, age 74, unknown 56.1
2394 Male, age 61, left hemisphere 55.6
2059 Female, age 85, both hemispheres 54.1
2199 Male, age 80, right hemisphere 53.7
2031 Female, age 72, unknown 52.8
2009 Female, age 91, both hemispheres 50.3
2629 Female, age 94, right hemisphere 49.3
Stria terminalis, bed nucleus
nTPM: 46.4
1974 Female, age 91, both hemispheres 53.5
2201 Male, age 74, unknown 44.3
2486 Female, age 94, both hemispheres 41.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 60.4
Samples: 246

Max nTPM: 144.7
Min nTPM: 32.5
Std nTPM: 17.3
Median nTPM: 56.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 144.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 135.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 134.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 128.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 124.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 104.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 103.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 102.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 100.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 98.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 96.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 94.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 91.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 89.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 89.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 88.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 87.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 86.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 85.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 84.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 83.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 83.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 82.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 81.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 81.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 80.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 79.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 77.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 76.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 76.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 76.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 75.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 75.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 74.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 73.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 73.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 73.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 73.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 72.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 72.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 71.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 71.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 71.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 71.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 70.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 70.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 70.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 70.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 69.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 68.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 68.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 67.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 67.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 67.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 67.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 67.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 66.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 66.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 66.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 66.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 65.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 65.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 65.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 64.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 64.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 64.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 63.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 63.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 62.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 62.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 62.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 62.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 62.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 61.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 61.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 61.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 61.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 60.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 60.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 60.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 59.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 59.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 58.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 58.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 58.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 57.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 57.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 57.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 57.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 57.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 57.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 56.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 56.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 56.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 56.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 56.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 56.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 56.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 55.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 55.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 55.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 55.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 55.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 54.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 54.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 54.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 54.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 54.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 54.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 54.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 53.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 53.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 53.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 53.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 53.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 53.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 53.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 52.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 52.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 51.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 51.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 51.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 51.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 50.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 49.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 49.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 49.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 48.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 48.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 48.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 48.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 47.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 47.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 47.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 47.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 46.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 46.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 46.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 46.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 46.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 46.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 45.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 45.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 45.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 45.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 45.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 44.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 43.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 43.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 41.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 40.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 40.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 40.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 40.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 39.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 39.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 38.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 38.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 37.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 35.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 32.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 66.7
Samples: 246

Max nTPM: 181.1
Min nTPM: 25.1
Std nTPM: 20.7
Median nTPM: 63.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 181.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 142.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 139.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 137.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 128.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 122.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 109.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 109.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 108.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 108.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 106.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 102.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 102.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 102.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 101.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 98.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 97.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 96.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 95.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 95.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 93.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 92.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 91.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 91.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 91.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 91.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 91.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 90.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 90.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 90.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 90.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 89.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 89.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 88.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 88.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 88.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 88.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 87.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 86.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 86.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 85.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 85.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 84.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 84.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 83.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 83.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 81.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 81.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 81.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 80.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 80.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 80.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 79.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 78.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 77.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 77.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 77.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 76.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 76.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 76.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 76.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 76.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 75.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 75.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 75.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 75.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 75.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 74.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 74.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 74.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 74.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 73.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 73.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 72.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 72.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 71.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 71.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 71.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 71.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 71.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 71.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 71.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 71.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 71.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 70.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 70.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 70.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 70.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 70.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 70.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 70.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 70.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 69.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 69.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 69.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 69.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 69.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 69.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 69.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 68.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 68.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 68.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 67.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 67.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 67.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 67.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 66.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 66.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 66.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 66.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 65.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 65.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 65.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 65.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 64.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 63.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 63.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 63.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 63.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 63.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 62.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 62.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 62.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 62.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 61.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 61.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 61.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 60.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 60.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 59.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 59.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 59.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 59.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 59.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 59.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 58.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 58.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 58.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 57.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 57.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 57.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 57.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 57.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 57.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 56.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 56.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 56.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 56.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 56.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 55.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 55.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 55.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 55.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 55.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 55.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 54.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 54.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 54.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 54.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 53.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 53.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 53.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 53.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 53.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 53.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 53.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 53.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 53.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 53.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 53.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 53.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 53.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 52.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 52.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 52.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 52.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 51.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 51.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 50.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 50.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 50.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 49.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 49.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 48.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 48.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 48.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 48.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 47.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 47.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 47.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 47.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 47.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 46.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 46.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 46.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 46.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 46.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 45.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 45.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 45.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 45.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 45.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 45.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 44.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 44.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 43.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 43.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 43.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 42.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 42.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 41.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 41.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 40.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 40.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 40.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 38.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 38.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 37.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 25.1
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Brain - Putamen (basal ganglia)
Average nTPM: 69.9
Samples: 205

Max nTPM: 168.1
Min nTPM: 35.0
Std nTPM: 16.2
Median nTPM: 67.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 168.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 119.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 110.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 110.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 103.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 103.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 102.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 100.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 99.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 99.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 98.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 97.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 96.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 96.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 95.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 95.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 95.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 93.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 92.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 91.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 91.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 90.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 89.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 89.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 87.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 86.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 86.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 85.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 84.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 84.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 83.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 83.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 83.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 82.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 82.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 82.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 82.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 81.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 80.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 80.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 80.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 79.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 79.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 78.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 78.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 78.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 78.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 78.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 78.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 77.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 77.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 76.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 76.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 76.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 75.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 75.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 75.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 75.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 75.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 75.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 74.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 74.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 74.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 74.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 73.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 73.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 73.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 73.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 73.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 72.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 72.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 72.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 72.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 72.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 72.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 71.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 71.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 71.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 70.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 70.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 70.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 70.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 70.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 70.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 69.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 69.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 69.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 69.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 68.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 68.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 68.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 67.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 67.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 67.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 67.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 66.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 66.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 66.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 66.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 66.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 66.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 66.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 65.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 65.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 65.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 65.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 65.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 65.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 65.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 65.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 65.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 65.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 64.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 64.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 64.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 64.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 64.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 64.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 63.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 63.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 63.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 63.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 63.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 63.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 63.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 62.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 62.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 62.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 61.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 61.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 60.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 60.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 60.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 60.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 60.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 60.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 59.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 59.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 59.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 58.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 58.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 58.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 58.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 57.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 57.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 56.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 56.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 55.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 55.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 55.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 54.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 54.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 54.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 53.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 53.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 53.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 53.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 52.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 52.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 52.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 52.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 52.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 52.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 51.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 51.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 51.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 51.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 51.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 49.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 49.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 48.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 48.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 46.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 46.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 45.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 45.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 44.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

101.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.9
FF:10164-103B2 76 years, female 74.9
Nucleus accumbens
Scaled Tags Per Million: 56.8
FF:10037-101F1 23-56 years, mixed 56.8
Putamen
Scaled Tags Per Million: 77.3
FF:10176-103C5 60 years, female 77.3
Globus pallidus
Scaled Tags Per Million: 101.4
FF:10175-103C4 60 years, female 131.8
FF:10161-103A8 76 years, female 71.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.1
Pig sample Sample description nTPM
Caudate
nTPM: 33.9
Samples: 4

Max nTPM: 40.9
Min nTPM: 27.0
Sample A Female 30.9
Sample B Female 36.8
Sample C Male 40.9
Sample D Male 27.0
Putamen
nTPM: 41.1
Samples: 4

Max nTPM: 49.7
Min nTPM: 30.6
Sample A Female 40.5
Sample B Female 30.6
Sample C Male 49.7
Sample D Male 43.6
Septum
nTPM: 35.2
Samples: 4

Max nTPM: 37.0
Min nTPM: 33.5
Sample A Female 36.2
Sample B Female 33.5
Sample C Male 37.0
Sample D Male 33.9
Ventral pallidum
nTPM: 34.6
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.3
Sample A Female 30.3
Sample B Female 38.4
Sample C Male 36.7
Sample D Male 32.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 73.7
Samples: 4

Max nTPM: 83.2
Min nTPM: 67.4
Sample A Male 74.7
Sample B Male 83.2
Sample C Female 67.4
Sample D Female 69.5
Septum
nTPM: 68.7
Samples: 4

Max nTPM: 77.7
Min nTPM: 61.8
Sample A Male 61.8
Sample B Male 70.0
Sample C Female 77.7
Sample D Female 65.1
Ventral forebrain
nTPM: 75.2
Samples: 4

Max nTPM: 88.1
Min nTPM: 63.6
Sample A Male 63.6
Sample B Male 79.7
Sample C Female 88.1
Sample D Female 69.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.9
69134256 Antisense, RP_050321_02_F03, Mouse strain C57BL/6J (56 days, male) 1.9
Pallidum
Expression energy: 1.7
69134256 Antisense, RP_050321_02_F03, Mouse strain C57BL/6J (56 days, male) 1.7

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