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CHCHD3
HPA
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  • CHCHD3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CHCHD3
Synonyms FLJ20420, Mic19, MICOS19, MINOS3, PPP1R22
Gene descriptioni

Full gene name according to HGNC.

Coiled-coil-helix-coiled-coil-helix domain containing 3
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband
Chromosome location (bp) 132784870 - 133082090
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000106554 (version 109)
Entrez gene 54927
HGNC HGNC:21906
UniProt Q9NX63 (UniProt - Evidence at protein level)
neXtProt NX_Q9NX63
GeneCards CHCHD3
Antibodypedia CHCHD3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane 1, 2, 3. Plays an important role in the maintenance of the MICOS complex stability and the mitochondrial cristae morphology 4, 5, 6. Has also been shown to function as a transcription factor which binds to the BAG1 promoter and represses BAG1 transcription 7.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Repressor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is an inner mitochondrial membrane scaffold protein. Absence of the encoded protein affects the structural integrity of mitochondrial cristae and leads to reductions in ATP production, cell growth, and oxygen consumption. This protein is part of the mitochondrial contact site and cristae organizing system (MICOS). Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CHCHD3-201
ENSP00000262570
ENST00000262570
Q9NX63
[Direct mapping] MICOS complex subunit MIC19
Show all
A4D1N4
[Target identity:100%; Query identity:100%] Coiled-coil-helix-coiled-coil-helix domain containing 3; Coiled-coil-helix-coiled-coil-helix domain containing 3, isoform CRA_d
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001401 [SAM complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0007007 [inner mitochondrial membrane organization]
GO:0008053 [mitochondrial fusion]
GO:0016020 [membrane]
GO:0019902 [phosphatase binding]
GO:0042407 [cristae formation]
GO:0044284 [mitochondrial crista junction]
GO:0060090 [molecular adaptor activity]
GO:0061617 [MICOS complex]
GO:0070062 [extracellular exosome]
GO:0140275 [MIB complex]
Show all
227 aa
26.2 kDa
No 0
CHCHD3-203
ENSP00000389297
ENST00000448878
C9JRZ6
[Direct mapping] MICOS complex subunit MIC19
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0016020 [membrane]
GO:0061617 [MICOS complex]
Show all
232 aa
26.8 kDa
No 0
CHCHD3-205
ENSP00000493081
ENST00000481152
A0A286YEX5
[Direct mapping] MICOS complex subunit MIC19
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0016020 [membrane]
GO:0061617 [MICOS complex]
Show all
101 aa
11.3 kDa
No 0

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