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AKNA
HPA
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  • AKNA
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

AKNA
Synonyms KIAA1968
Gene descriptioni

Full gene name according to HGNC.

AT-hook transcription factor
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband q32
Chromosome location (bp) 114334156 - 114394405
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000106948 (version 109)
Entrez gene 80709
HGNC HGNC:24108
UniProt Q7Z591 (UniProt - Evidence at protein level)
neXtProt NX_Q7Z591
GeneCards AKNA
Antibodypedia AKNA antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Centrosomal protein that plays a key role in cell delamination by regulating microtubule organization (By similarity). Required for the delamination and retention of neural stem cells from the subventricular zone during neurogenesis (By similarity). Also regulates the epithelial-to-mesenchymal transition in other epithelial cells (By similarity). Acts by increasing centrosomal microtubule nucleation and recruiting nucleation factors and minus-end stabilizers, thereby destabilizing microtubules at the adherens junctions and mediating constriction of the apical endfoot (By similarity). In addition, may also act as a transcription factor that specifically activates the expression of the CD40 receptor and its ligand CD40L/CD154, two cell surface molecules on lymphocytes that are critical for antigen-dependent-B-cell development 1. Binds to A/T-rich promoters 2. It is unclear how it can both act as a microtubule organizer and as a transcription factor; additional evidences are required to reconcile these two apparently contradictory functions (Probable).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator, DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Neurogenesis, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in centrosome; cytosol; and nuclear lumen. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
AKNA-201
ENSP00000223791
ENST00000223791
Q7Z591
[Direct mapping] Microtubule organization protein AKNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001650 [fibrillar center]
GO:0001837 [epithelial to mesenchymal transition]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0021849 [neuroblast division in subventricular zone]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050727 [regulation of inflammatory response]
GO:0060232 [delamination]
GO:0060234 [neuroblast delamination]
Show all
899 aa
96 kDa
No 0
AKNA-202
ENSP00000303769
ENST00000307564
Q7Z591
[Direct mapping] Microtubule organization protein AKNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001650 [fibrillar center]
GO:0001837 [epithelial to mesenchymal transition]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0021849 [neuroblast division in subventricular zone]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050727 [regulation of inflammatory response]
GO:0060232 [delamination]
GO:0060234 [neuroblast delamination]
Show all
1439 aa
155.1 kDa
No 0
AKNA-203
ENSP00000309222
ENST00000312033
Q7Z591
[Direct mapping] Microtubule organization protein AKNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001650 [fibrillar center]
GO:0001837 [epithelial to mesenchymal transition]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0021849 [neuroblast division in subventricular zone]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050727 [regulation of inflammatory response]
GO:0060232 [delamination]
GO:0060234 [neuroblast delamination]
Show all
831 aa
90.9 kDa
No 0
AKNA-204
ENSP00000363188
ENST00000374075
Q7Z591
[Direct mapping] Microtubule organization protein AKNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001650 [fibrillar center]
GO:0001837 [epithelial to mesenchymal transition]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0021849 [neuroblast division in subventricular zone]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050727 [regulation of inflammatory response]
GO:0060232 [delamination]
GO:0060234 [neuroblast delamination]
Show all
1358 aa
145.9 kDa
No 0
AKNA-205
ENSP00000363192
ENST00000374079
Q7Z591
[Direct mapping] Microtubule organization protein AKNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001650 [fibrillar center]
GO:0001837 [epithelial to mesenchymal transition]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0021849 [neuroblast division in subventricular zone]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050727 [regulation of inflammatory response]
GO:0060232 [delamination]
GO:0060234 [neuroblast delamination]
Show all
384 aa
40.6 kDa
No 0
AKNA-206
ENSP00000363201
ENST00000374088
Q7Z591
[Direct mapping] Microtubule organization protein AKNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001650 [fibrillar center]
GO:0001837 [epithelial to mesenchymal transition]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005814 [centriole]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0021849 [neuroblast division in subventricular zone]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050727 [regulation of inflammatory response]
GO:0060232 [delamination]
GO:0060234 [neuroblast delamination]
Show all
1439 aa
155.1 kDa
No 0

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