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  • BAG1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:111.9 nTPM
HPA Brain:84.2 nTPM
GTEx:111.9 nTPM
FANTOM5:95.8 Scaled Tags Per Million
Pig:23.4 nTPM
Mouse:199.6 nTPM
Allen mouse:1.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018121Antibody CAB002486
Glial cells MediumLow
Neuronal cells MediumLow



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 56.0
1857 Female, age 85, left hemisphere 69.1
1854 Male, age 80, left hemisphere 58.5
2290 Female, age 72, unknown 58.5
2288 Male, age 75, left hemisphere 58.3
2289 Male, age 61, right hemisphere 53.6
2846 Female, age 79, unknown 52.5
2481 Female, age 94, left hemisphere 52.0
1781 Male, age 74, unknown 45.3
Globus pallidus, externus
nTPM: 84.2
2567 Female, age 72, unknown 100.8
1996 Male, age 80, right hemisphere 90.0
2772 Female, age 79, unknown 87.0
2395 Male, age 75, both hemispheres 79.9
2646 Male, age 61, right hemisphere 63.5
Globus pallidus, internus
nTPM: 81.2
2287 Male, age 75, right hemisphere 109.1
1818 Male, age 74, unknown 86.6
2111 Female, age 85, right hemisphere 81.2
2483 Female, age 94, right hemisphere 80.8
2037 Male, age 80, right hemisphere 80.7
2566 Female, age 72, unknown 72.0
2778 Female, age 91, both hemispheres 57.9
Nucleus accumbens
nTPM: 58.5
2391 Female, age 94, left hemisphere 76.4
2286 Male, age 75, left hemisphere 65.7
1783 Male, age 74, unknown 59.6
2824 Male, age 61, right hemisphere 57.0
1806 Female, age 85, left hemisphere 56.7
2698 Female, age 72, unknown 54.3
1856 Female, age 91, right hemisphere 51.8
2732 Male, age 80, right hemisphere 46.3
Nucleus basalis of Meynert
nTPM: 60.9
2569 Male, age 61, both hemispheres 73.8
2821 Male, age 75, both hemispheres 65.9
2393 Male, age 80, right hemisphere 54.8
2484 Female, age 94, left hemisphere 49.1
Nucleus of the diagonal band
nTPM: 44.4
2029 Male, age 61, right hemisphere 52.0
2775 Male, age 80, right hemisphere 45.5
1812 Female, age 91, both hemispheres 45.4
2195 Female, age 85, both hemispheres 42.0
1979 Male, age 74, unknown 37.3
Putamen
nTPM: 54.2
2647 Male, age 75, left hemisphere 63.1
1838 Male, age 80, right hemisphere 59.7
2466 Female, age 79, unknown 57.3
1829 Male, age 74, unknown 56.9
1937 Female, age 91, right hemisphere 53.7
2482 Female, age 94, left hemisphere 45.3
2489 Female, age 72, unknown 43.7
Septal nuclei
nTPM: 46.0
2031 Female, age 72, unknown 54.4
2394 Male, age 61, left hemisphere 50.1
2199 Male, age 80, right hemisphere 47.9
1960 Male, age 74, unknown 47.4
2059 Female, age 85, both hemispheres 43.6
2629 Female, age 94, right hemisphere 40.9
2009 Female, age 91, both hemispheres 37.8
Stria terminalis, bed nucleus
nTPM: 37.3
2201 Male, age 74, unknown 48.3
1974 Female, age 91, both hemispheres 35.0
2486 Female, age 94, both hemispheres 28.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 91.1
Samples: 246

Max nTPM: 214.4
Min nTPM: 37.5
Std nTPM: 27.2
Median nTPM: 86.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 214.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 213.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 204.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 182.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 165.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 160.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 159.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 157.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 153.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 148.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 147.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 146.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 145.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 144.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 140.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 139.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 138.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 137.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 135.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 132.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 132.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 130.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 127.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 124.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 124.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 124.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 122.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 121.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 121.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 119.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 116.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 115.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 114.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 114.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 114.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 113.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 113.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 110.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 110.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 110.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 110.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 110.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 108.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 106.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 106.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 105.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 105.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 105.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 104.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 104.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 103.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 102.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 102.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 102.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 101.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 101.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 101.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 101.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 100.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 100.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 100.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 100.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 100.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 99.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 99.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 99.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 99.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 98.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 98.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 97.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 97.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 97.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 96.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 96.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 96.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 95.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 95.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 95.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 95.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 94.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 94.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 94.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 94.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 93.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 93.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 93.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 92.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 92.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 92.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 92.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 91.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 91.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 91.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 91.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 90.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 90.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 90.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 90.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 89.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 89.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 89.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 88.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 88.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 88.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 88.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 88.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 87.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 87.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 87.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 87.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 86.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 86.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 86.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 86.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 85.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 85.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 85.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 85.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 84.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 84.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 84.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 83.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 83.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 83.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 82.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 82.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 82.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 82.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 82.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 81.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 81.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 81.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 80.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 80.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 80.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 79.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 79.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 79.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 79.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 78.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 78.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 77.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 77.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 77.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 77.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 77.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 76.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 76.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 76.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 76.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 75.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 75.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 75.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 75.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 75.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 74.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 74.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 74.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 74.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 74.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 74.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 73.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 73.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 73.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 73.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 73.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 73.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 72.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 71.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 69.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 69.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 69.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 69.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 69.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 69.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 68.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 68.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 67.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 67.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 66.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 66.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 65.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 64.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 64.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 62.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 62.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 62.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 62.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 61.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 60.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 58.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 56.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 56.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 56.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 56.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 52.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 50.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 47.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 37.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 107.2
Samples: 246

Max nTPM: 229.4
Min nTPM: 59.0
Std nTPM: 25.8
Median nTPM: 103.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 229.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 192.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 188.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 187.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 174.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 171.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 164.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 164.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 162.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 158.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 156.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 156.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 155.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 155.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 154.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 152.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 149.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 148.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 147.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 144.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 143.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 141.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 141.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 141.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 140.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 140.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 139.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 138.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 137.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 137.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 136.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 135.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 134.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 133.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 132.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 131.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 130.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 129.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 128.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 128.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 128.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 127.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 127.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 126.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 126.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 126.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 125.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 125.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 125.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 124.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 124.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 124.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 123.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 123.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 123.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 123.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 123.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 122.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 121.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 121.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 120.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 120.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 120.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 119.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 119.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 119.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 119.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 118.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 118.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 118.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 117.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 117.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 117.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 116.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 116.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 116.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 116.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 116.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 115.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 115.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 115.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 114.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 114.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 114.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 114.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 114.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 113.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 113.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 113.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 112.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 112.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 111.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 111.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 111.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 111.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 110.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 110.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 109.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 109.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 109.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 109.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 108.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 108.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 108.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 108.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 107.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 107.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 107.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 107.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 107.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 106.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 106.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 106.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 105.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 105.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 104.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 104.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 104.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 104.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 104.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 103.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 103.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 103.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 103.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 102.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 102.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 102.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 102.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 102.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 101.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 101.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 101.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 101.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 101.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 100.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 100.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 100.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 100.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 100.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 100.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 100.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 99.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 99.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 99.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 99.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 98.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 98.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 98.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 98.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 98.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 98.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 97.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 97.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 97.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 97.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 97.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 96.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 96.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 96.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 96.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 96.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 95.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 95.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 95.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 95.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 95.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 94.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 94.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 94.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 94.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 93.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 93.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 93.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 93.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 92.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 92.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 91.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 91.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 91.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 90.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 90.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 90.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 89.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 89.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 89.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 89.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 88.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 88.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 88.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 88.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 88.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 87.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 87.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 87.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 87.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 86.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 86.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 86.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 86.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 86.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 85.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 85.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 84.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 84.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 83.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 83.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 82.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 82.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 81.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 81.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 81.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 80.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 80.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 80.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 80.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 79.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 78.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 78.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 77.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 77.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 76.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 75.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 75.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 75.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 75.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 75.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 74.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 74.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 72.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 72.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 71.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 71.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 71.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 70.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 70.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 69.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 69.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 68.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 68.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 67.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 65.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 65.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 62.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 59.0
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Brain - Putamen (basal ganglia)
Average nTPM: 111.9
Samples: 205

Max nTPM: 320.4
Min nTPM: 59.0
Std nTPM: 32.6
Median nTPM: 105.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 320.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 263.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 204.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 192.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 187.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 185.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 180.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 175.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 174.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 167.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 167.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 166.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 165.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 165.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 165.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 161.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 158.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 158.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 158.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 158.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 151.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 151.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 149.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 148.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 147.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 146.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 144.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 143.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 143.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 142.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 141.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 140.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 138.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 136.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 135.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 135.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 131.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 131.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 128.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 128.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 127.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 127.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 127.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 126.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 126.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 125.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 125.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 125.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 124.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 123.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 123.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 122.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 122.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 122.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 122.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 122.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 121.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 121.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 121.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 119.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 119.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 119.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 119.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 117.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 116.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 116.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 116.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 115.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 115.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 115.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 113.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 112.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 112.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 112.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 112.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 112.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 111.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 111.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 111.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 111.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 111.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 111.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 111.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 110.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 110.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 110.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 109.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 109.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 109.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 109.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 109.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 108.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 108.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 108.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 107.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 107.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 107.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 106.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 106.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 105.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 105.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 105.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 105.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 104.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 104.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 104.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 104.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 103.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 103.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 103.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 103.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 102.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 102.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 102.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 102.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 102.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 102.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 102.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 102.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 101.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 101.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 101.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 101.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 101.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 100.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 100.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 100.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 99.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 99.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 99.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 99.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 99.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 98.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 98.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 98.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 97.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 97.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 97.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 97.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 96.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 95.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 95.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 95.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 95.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 94.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 94.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 93.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 93.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 93.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 93.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 92.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 92.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 91.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 91.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 90.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 90.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 89.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 89.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 88.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 88.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 87.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 86.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 86.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 86.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 86.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 85.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 85.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 84.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 83.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 83.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 82.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 82.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 81.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 81.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 81.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 81.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 81.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 80.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 80.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 80.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 80.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 79.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 78.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 78.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 76.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 76.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 75.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 75.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 75.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 74.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 73.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 73.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 71.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 70.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 65.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 64.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 59.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

95.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 73.9
FF:10164-103B2 76 years, female 73.9
Nucleus accumbens
Scaled Tags Per Million: 63.5
FF:10037-101F1 23-56 years, mixed 63.5
Putamen
Scaled Tags Per Million: 95.8
FF:10176-103C5 60 years, female 95.8
Globus pallidus
Scaled Tags Per Million: 75.9
FF:10175-103C4 60 years, female 84.7
FF:10161-103A8 76 years, female 67.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.4
Pig sample Sample description nTPM
Caudate
nTPM: 16.7
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.3
Sample A Female 17.0
Sample B Female 17.2
Sample C Male 18.2
Sample D Male 14.3
Putamen
nTPM: 19.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 16.1
Sample A Female 23.6
Sample B Female 16.1
Sample C Male 21.2
Sample D Male 17.3
Septum
nTPM: 23.4
Samples: 4

Max nTPM: 26.7
Min nTPM: 20.8
Sample A Female 24.3
Sample B Female 20.8
Sample C Male 26.7
Sample D Male 21.9
Ventral pallidum
nTPM: 20.6
Samples: 4

Max nTPM: 24.0
Min nTPM: 16.4
Sample A Female 16.4
Sample B Female 24.0
Sample C Male 24.0
Sample D Male 18.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 176.9
Samples: 4

Max nTPM: 199.6
Min nTPM: 158.3
Sample A Male 158.3
Sample B Male 159.1
Sample C Female 190.4
Sample D Female 199.6
Septum
nTPM: 150.7
Samples: 4

Max nTPM: 159.5
Min nTPM: 135.1
Sample A Male 150.0
Sample B Male 159.5
Sample C Female 158.3
Sample D Female 135.1
Ventral forebrain
nTPM: 199.6
Samples: 4

Max nTPM: 241.9
Min nTPM: 178.6
Sample A Male 190.4
Sample B Male 178.6
Sample C Female 241.9
Sample D Female 187.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
75043147 Antisense, RP_060220_02_G08, Mouse strain C57BL/6J (56 days, male) 1.6
69134523 Antisense, RP_050321_03_A11, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 1.6
75043147 Antisense, RP_060220_02_G08, Mouse strain C57BL/6J (56 days, male) 2.5
69134523 Antisense, RP_050321_03_A11, Mouse strain C57BL/6J (56 days, male) 0.8

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