HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:26.8 nTPM
HPA Brain:109.9 nTPM
GTEx:26.8 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:55.1 nTPM
Mouse:74.4 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 109.9
Sample id Sample description nTPM
Hippocampus
nTPM: 91.2
1898 Male, age 80, left hemisphere 110.8
2621 Female, age 67, right hemisphere 102.4
2148 Female, age 91, left hemisphere 101.1
1855 Male, age 76, left hemisphere 93.3
2529 Female, age 94, left hemisphere 80.1
1911 Female, age 85, right hemisphere 59.5
Dentate gyrus
nTPM: 91.3
1927 Female, age 91, both hemispheres 106.1
2531 Female, age 67, both hemispheres 103.6
2530 Female, age 94, left hemisphere 97.7
2528 Male, age 74, both hemispheres 85.3
2246 Female, age 85, both hemispheres 78.0
2010 Male, age 76, both hemispheres 77.1
Entorhinal gyrus
nTPM: 101.8
2613 Female, age 94, left hemisphere 145.6
2764 Male, age 80, right hemisphere 112.3
1938 Female, age 85, left hemisphere 106.7
1787 Male, age 76, left hemisphere 96.4
2686 Male, age 75, right hemisphere 83.4
2117 Female, age 91, right hemisphere 66.4
Hippocampus, CA1
nTPM: 89.3
2749 Male, age 80, left hemisphere 118.4
2527 Male, age 74, both hemispheres 97.8
1873 Female, age 85, both hemispheres 91.9
2045 Male, age 76, both hemispheres 69.6
2082 Female, age 91, right hemisphere 69.0
Hippocampus, CA2
nTPM: 90.9
1963 Male, age 80, left hemisphere 131.7
1892 Male, age 76, both hemispheres 94.8
2437 Female, age 94, left hemisphere 89.5
2113 Female, age 91, right hemisphere 82.2
1940 Female, age 85, left hemisphere 81.3
2249 Male, age 74, both hemispheres 65.8
Hippocampus, CA3
nTPM: 92.1
2620 Female, age 94, left hemisphere 131.0
2861 Female, age 67, both hemispheres 128.6
2137 Male, age 80, left hemisphere 89.1
2436 Male, age 74, both hemispheres 69.8
1867 Male, age 76, both hemispheres 68.8
1891 Female, age 85, both hemispheres 65.1
Parahippocampal cortex
nTPM: 93.7
2245 Female, age 91, both hemispheres 110.5
2693 Female, age 94, both hemispheres 106.4
1850 Male, age 80, both hemispheres 103.1
1933 Female, age 85, both hemispheres 101.6
2250 Female, age 67, right hemisphere 98.5
1990 Female, age 91, right hemisphere 97.6
2622 Female, age 67, right hemisphere 89.0
2692 Male, age 74, both hemispheres 84.3
2532 Female, age 72, left hemisphere 78.0
2018 Male, age 76, both hemispheres 68.3
Perirhinal gyrus
nTPM: 109.9
1847 Female, age 91, left hemisphere 141.0
2521 Female, age 94, right hemisphere 122.9
1794 Male, age 80, right hemisphere 106.4
2848 Male, age 76, right hemisphere 90.9
1841 Female, age 85, right hemisphere 88.4
Subiculum
nTPM: 69.4
1977 Female, age 85, both hemispheres 85.2
2619 Male, age 74, both hemispheres 80.4
2438 Female, age 94, left hemisphere 74.9
2729 Female, age 91, right hemisphere 68.0
1901 Male, age 80, both hemispheres 63.2
2042 Male, age 76, both hemispheres 44.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 74.5
Min nTPM: 5.2
Std nTPM: 13.9
Median nTPM: 25.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 74.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 68.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 57.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 56.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 55.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 53.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 53.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 53.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.3
FF:10153-102I9 76 years, female 42.4
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 55.1
Pig sample Sample description nTPM
Subiculum
nTPM: 55.1
Samples: 4

Max nTPM: 72.4
Min nTPM: 44.3
Sample A Female 72.4
Sample B Female 50.3
Sample C Male 53.4
Sample D Male 44.3
Dorsal hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 48.6
Min nTPM: 32.7
Sample A Female 48.6
Sample B Female 47.9
Sample C Male 37.7
Sample D Male 32.7
Entorhinal cortex
nTPM: 49.3
Samples: 4

Max nTPM: 53.7
Min nTPM: 45.9
Sample A Female 49.2
Sample B Female 48.3
Sample C Male 53.7
Sample D Male 45.9
Ventral hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 60.9
Min nTPM: 33.6
Sample A Female 38.7
Sample B Female 33.6
Sample C Male 60.9
Sample D Male 45.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 74.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.5
Samples: 4

Max nTPM: 78.0
Min nTPM: 70.8
Sample A Male 76.0
Sample B Male 70.8
Sample C Female 73.0
Sample D Female 78.0
Hippocampal formation
nTPM: 52.0
Samples: 4

Max nTPM: 57.8
Min nTPM: 47.8
Sample A Male 57.8
Sample B Male 51.6
Sample C Female 47.8
Sample D Female 50.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
74658000 Antisense, RP_060220_04_C01, Mouse strain C57BL/6J (56 days, male) 3.0
69526713 Antisense, RP_050421_01_E03, Mouse strain C57BL/6J (56 days, male) 2.4
77869854 Antisense, RP_070212_03_A07, Mouse strain C57BL/6J (56 days, male) 1.6

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