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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:114.8 nTPM
FANTOM5:237.4 Scaled Tags Per Million
Pig:92.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018129
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 114.8
Samples: 246

Max nTPM: 209.6
Min nTPM: 63.7
Std nTPM: 27.7
Median nTPM: 114.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 209.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 209.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 206.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 200.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 198.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 189.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 177.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 174.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 169.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 166.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 166.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 164.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 163.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 162.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 162.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 160.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 158.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 157.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 155.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 155.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 154.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 154.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 152.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 152.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 151.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 150.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 148.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 148.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 146.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 145.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 142.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 141.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 140.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 139.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 139.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 139.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 138.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 138.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 137.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 137.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 136.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 136.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 135.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 135.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 135.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 135.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 134.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 133.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 132.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 132.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 132.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 131.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 131.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 131.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 131.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 131.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 130.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 130.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 130.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 130.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 130.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 129.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 129.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 128.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 128.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 128.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 128.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 127.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 127.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 125.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 125.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 125.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 125.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 124.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 124.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 124.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 124.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 124.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 123.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 123.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 122.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 122.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 122.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 122.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 122.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 121.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 121.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 121.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 121.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 121.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 120.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 120.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 120.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 120.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 120.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 119.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 119.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 118.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 118.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 118.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 118.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 117.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 117.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 117.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 117.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 117.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 117.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 116.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 116.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 116.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 116.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 116.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 115.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 115.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 115.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 115.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 114.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 114.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 114.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 114.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 114.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 113.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 113.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 113.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 113.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 113.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 112.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 112.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 112.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 111.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 111.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 111.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 111.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 111.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 110.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 110.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 109.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 109.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 109.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 109.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 108.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 108.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 107.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 107.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 107.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 106.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 106.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 106.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 106.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 105.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 105.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 105.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 104.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 104.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 104.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 104.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 104.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 104.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 103.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 103.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 103.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 102.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 101.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 101.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 101.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 100.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 100.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 99.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 99.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 98.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 98.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 98.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 98.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 97.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 97.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 96.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 96.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 96.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 96.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 95.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 95.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 95.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 93.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 93.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 93.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 93.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 93.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 92.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 91.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 91.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 90.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 90.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 89.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 89.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 89.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 89.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 88.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 87.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 87.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 86.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 86.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 84.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 84.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 83.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 83.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 80.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 78.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 78.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 78.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 77.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 77.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 76.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 76.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 75.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 74.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 73.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 71.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 71.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 71.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 71.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 71.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 69.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 68.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 66.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 66.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 66.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 66.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

237.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 237.4
FF:10164-103B2 76 years, female 237.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.9
Pig sample Sample description nTPM
Caudate
nTPM: 92.9
Samples: 4

Max nTPM: 111.4
Min nTPM: 80.6
Sample A Female 89.0
Sample B Female 90.6
Sample C Male 111.4
Sample D Male 80.6

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