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TRDMT1
HPA
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  • TRDMT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TRDMT1
Synonyms DNMT2, RNMT1
Gene descriptioni

Full gene name according to HGNC.

TRNA aspartic acid methyltransferase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband p13
Chromosome location (bp) 17137336 - 17202054
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000107614 (version 109)
Entrez gene 1787
HGNC HGNC:2977
UniProt O14717 (UniProt - Evidence at protein level)
neXtProt NX_O14717
GeneCards TRDMT1
Antibodypedia TRDMT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Specifically methylates cytosine 38 in the anticodon loop of tRNA(Asp) 1. Has higher activity on tRNA(Asp) modified with queuosine at position 34 2.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Methyltransferase, RNA-binding, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

tRNA processing
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

S-adenosyl-L-methionine
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein responsible for the methylation of aspartic acid transfer RNA, specifically at the cytosine-38 residue in the anticodon loop. This enzyme also possesses residual DNA-(cytosine-C5) methyltransferase activity. While similar in sequence and structure to DNA cytosine methyltransferases, this gene is distinct and highly conserved in its function among taxa. [provided by RefSeq, Jun 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TRDMT1-201
ENSP00000324263
ENST00000313936
H0Y2T8
[Direct mapping] tRNA (cytosine(38)-C(5))-methyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0016740 [transferase activity]
GO:0032259 [methylation]
Show all
227 aa
25.8 kDa
No 0
TRDMT1-203
ENSP00000367030
ENST00000377799
O14717
[Direct mapping] tRNA (cytosine(38)-C(5))-methyltransferase
Show all
Q6ICS7
[Target identity:100%; Query identity:100%] DNMT2 protein; HCG23994, isoform CRA_a; cDNA FLJ76302, highly similar to Homo sapiens DNA (cytosine-5-)-methyltransferase 2 (DNMT2), transcript variant a, mRNA; tRNA aspartic acid methyltransferase 1 variant 3; tRNA aspartic acid methyltransferase 1 variant 4
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001975 [response to amphetamine]
GO:0002946 [tRNA C5-cytosine methylation]
GO:0003723 [RNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006400 [tRNA modification]
GO:0008033 [tRNA processing]
GO:0008168 [methyltransferase activity]
GO:0008175 [tRNA methyltransferase activity]
GO:0016428 [tRNA (cytosine-5-)-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0030488 [tRNA methylation]
GO:0032259 [methylation]
GO:0036416 [tRNA stabilization]
Show all
391 aa
44.6 kDa
No 0
TRDMT1-205
ENSP00000390611
ENST00000436968
H0Y4A2
[Direct mapping] tRNA (cytosine(38)-C(5))-methyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
86 aa
9.5 kDa
No 0
TRDMT1-210
ENSP00000419625
ENST00000488990
B7Z8H2
[Direct mapping] cDNA FLJ52038, highly similar to DNA (cytosine-5)-methyltransferase-like protein 2; tRNA (cytosine(38)-C(5))-methyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0016740 [transferase activity]
GO:0032259 [methylation]
Show all
254 aa
28.9 kDa
No 0
TRDMT1-212
ENSP00000431476
ENST00000525762
A0A0B4J214
[Direct mapping] tRNA (cytosine(38)-C(5))-methyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0016740 [transferase activity]
GO:0032259 [methylation]
Show all
136 aa
15.5 kDa
No 0

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