HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:52.9 nTPM
HPA Brain:136.1 nTPM
GTEx:52.9 nTPM
FANTOM5:333.1 Scaled Tags Per Million
Pig:105.1 nTPM
Mouse:291.4 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008233
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 136.1
Sample id Sample description nTPM
Hippocampus
nTPM: 90.6
1898 Male, age 80, left hemisphere 130.5
1855 Male, age 76, left hemisphere 98.5
2621 Female, age 67, right hemisphere 90.7
2148 Female, age 91, left hemisphere 82.3
1911 Female, age 85, right hemisphere 80.2
2529 Female, age 94, left hemisphere 61.4
Dentate gyrus
nTPM: 95.8
1927 Female, age 91, both hemispheres 143.9
2010 Male, age 76, both hemispheres 104.3
2246 Female, age 85, both hemispheres 88.0
2530 Female, age 94, left hemisphere 85.3
2531 Female, age 67, both hemispheres 76.9
2528 Male, age 74, both hemispheres 76.3
Entorhinal gyrus
nTPM: 97.3
1938 Female, age 85, left hemisphere 121.8
2613 Female, age 94, left hemisphere 116.9
2764 Male, age 80, right hemisphere 108.2
1787 Male, age 76, left hemisphere 104.2
2686 Male, age 75, right hemisphere 77.5
2117 Female, age 91, right hemisphere 54.9
Hippocampus, CA1
nTPM: 118.2
2749 Male, age 80, left hemisphere 229.1
1873 Female, age 85, both hemispheres 112.4
2045 Male, age 76, both hemispheres 92.9
2527 Male, age 74, both hemispheres 83.7
2082 Female, age 91, right hemisphere 73.1
Hippocampus, CA2
nTPM: 99.4
1892 Male, age 76, both hemispheres 138.9
1963 Male, age 80, left hemisphere 135.0
1940 Female, age 85, left hemisphere 87.2
2249 Male, age 74, both hemispheres 82.0
2437 Female, age 94, left hemisphere 77.2
2113 Female, age 91, right hemisphere 75.8
Hippocampus, CA3
nTPM: 108.8
2137 Male, age 80, left hemisphere 206.3
1867 Male, age 76, both hemispheres 105.4
2620 Female, age 94, left hemisphere 100.2
2436 Male, age 74, both hemispheres 92.5
1891 Female, age 85, both hemispheres 84.3
2861 Female, age 67, both hemispheres 63.9
Parahippocampal cortex
nTPM: 99.1
1850 Male, age 80, both hemispheres 157.9
1990 Female, age 91, right hemisphere 119.3
2693 Female, age 94, both hemispheres 111.2
1933 Female, age 85, both hemispheres 99.8
2245 Female, age 91, both hemispheres 99.7
2532 Female, age 72, left hemisphere 96.7
2250 Female, age 67, right hemisphere 87.3
2018 Male, age 76, both hemispheres 81.4
2622 Female, age 67, right hemisphere 70.6
2692 Male, age 74, both hemispheres 67.0
Perirhinal gyrus
nTPM: 136.1
1847 Female, age 91, left hemisphere 173.0
1794 Male, age 80, right hemisphere 142.7
1841 Female, age 85, right hemisphere 131.4
2521 Female, age 94, right hemisphere 124.7
2848 Male, age 76, right hemisphere 108.6
Subiculum
nTPM: 87.0
1901 Male, age 80, both hemispheres 121.6
1977 Female, age 85, both hemispheres 100.8
2042 Male, age 76, both hemispheres 87.3
2438 Female, age 94, left hemisphere 81.5
2619 Male, age 74, both hemispheres 68.2
2729 Female, age 91, right hemisphere 62.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.9
Samples: 197

Max nTPM: 133.9
Min nTPM: 17.5
Std nTPM: 28.7
Median nTPM: 46.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 133.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 121.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 120.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 117.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 115.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 109.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 108.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 108.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 107.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 333.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 333.1
FF:10169-103B7 60 years, female 428.9
FF:10153-102I9 76 years, female 237.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 105.1
Pig sample Sample description nTPM
Subiculum
nTPM: 80.0
Samples: 4

Max nTPM: 91.0
Min nTPM: 73.4
Sample A Female 91.0
Sample B Female 74.1
Sample C Male 73.4
Sample D Male 81.6
Dorsal hippocampus
nTPM: 105.1
Samples: 4

Max nTPM: 130.9
Min nTPM: 86.4
Sample A Female 130.9
Sample B Female 115.0
Sample C Male 86.4
Sample D Male 88.2
Entorhinal cortex
nTPM: 90.7
Samples: 4

Max nTPM: 105.2
Min nTPM: 76.2
Sample A Female 96.0
Sample B Female 105.2
Sample C Male 85.2
Sample D Male 76.2
Ventral hippocampus
nTPM: 86.9
Samples: 4

Max nTPM: 114.1
Min nTPM: 69.0
Sample A Female 86.4
Sample B Female 69.0
Sample C Male 77.9
Sample D Male 114.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 291.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 240.4
Samples: 4

Max nTPM: 261.2
Min nTPM: 224.7
Sample A Male 224.7
Sample B Male 238.4
Sample C Female 237.1
Sample D Female 261.2
Hippocampal formation
nTPM: 291.4
Samples: 4

Max nTPM: 322.4
Min nTPM: 249.9
Sample A Male 293.4
Sample B Male 300.0
Sample C Female 322.4
Sample D Female 249.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
71325360 Antisense, RP_050825_02_F12, Mouse strain C57BL/6J (56 days, male) 15.4

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