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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:45.5 nTPM
HPA Brain:120.4 nTPM
GTEx:45.5 nTPM
FANTOM5:71.6 Scaled Tags Per Million
Pig:42.1 nTPM
Mouse:118.8 nTPM
Allen mouse:2.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044204
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 99.2
2290 Female, age 72, unknown 118.5
2289 Male, age 61, right hemisphere 112.9
2288 Male, age 75, left hemisphere 103.9
1781 Male, age 74, unknown 100.8
2846 Female, age 79, unknown 100.7
1854 Male, age 80, left hemisphere 96.6
1857 Female, age 85, left hemisphere 94.5
2481 Female, age 94, left hemisphere 65.8
Globus pallidus, externus
nTPM: 31.5
2646 Male, age 61, right hemisphere 46.7
2567 Female, age 72, unknown 35.4
2772 Female, age 79, unknown 27.8
2395 Male, age 75, both hemispheres 26.2
1996 Male, age 80, right hemisphere 21.4
Globus pallidus, internus
nTPM: 26.8
2483 Female, age 94, right hemisphere 49.5
2566 Female, age 72, unknown 33.5
1818 Male, age 74, unknown 31.9
2037 Male, age 80, right hemisphere 23.2
2111 Female, age 85, right hemisphere 20.4
2778 Female, age 91, both hemispheres 16.0
2287 Male, age 75, right hemisphere 13.1
Nucleus accumbens
nTPM: 94.4
1783 Male, age 74, unknown 131.8
1856 Female, age 91, right hemisphere 128.5
2824 Male, age 61, right hemisphere 112.9
1806 Female, age 85, left hemisphere 96.0
2286 Male, age 75, left hemisphere 85.1
2698 Female, age 72, unknown 81.0
2732 Male, age 80, right hemisphere 70.4
2391 Female, age 94, left hemisphere 49.6
Nucleus basalis of Meynert
nTPM: 80.4
2484 Female, age 94, left hemisphere 99.8
2393 Male, age 80, right hemisphere 87.0
2821 Male, age 75, both hemispheres 74.2
2569 Male, age 61, both hemispheres 60.5
Nucleus of the diagonal band
nTPM: 120.4
2195 Female, age 85, both hemispheres 135.2
2029 Male, age 61, right hemisphere 134.1
2775 Male, age 80, right hemisphere 130.9
1812 Female, age 91, both hemispheres 112.5
1979 Male, age 74, unknown 89.4
Putamen
nTPM: 103.3
2647 Male, age 75, left hemisphere 118.8
1838 Male, age 80, right hemisphere 113.6
1937 Female, age 91, right hemisphere 107.3
2489 Female, age 72, unknown 105.8
2466 Female, age 79, unknown 104.8
1829 Male, age 74, unknown 99.7
2482 Female, age 94, left hemisphere 73.2
Septal nuclei
nTPM: 112.5
1960 Male, age 74, unknown 157.8
2059 Female, age 85, both hemispheres 128.4
2031 Female, age 72, unknown 116.4
2629 Female, age 94, right hemisphere 110.1
2009 Female, age 91, both hemispheres 108.8
2394 Male, age 61, left hemisphere 96.3
2199 Male, age 80, right hemisphere 69.4
Stria terminalis, bed nucleus
nTPM: 110.4
2486 Female, age 94, both hemispheres 125.9
1974 Female, age 91, both hemispheres 113.6
2201 Male, age 74, unknown 91.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 30.6
Samples: 246

Max nTPM: 63.1
Min nTPM: 4.3
Std nTPM: 13.7
Median nTPM: 31.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 63.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 62.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 60.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 59.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 58.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 57.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 56.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 51.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 50.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 50.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 50.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 50.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 50.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 49.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 49.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 49.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 48.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 48.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 48.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 47.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 47.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 47.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 47.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 46.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 46.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 45.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 45.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 44.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 43.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 43.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 43.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 42.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 42.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 42.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 42.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 41.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 41.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 40.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 40.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 40.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 39.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 39.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 39.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 39.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 39.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 39.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 39.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 39.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 39.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 39.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 39.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 38.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 38.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 38.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 37.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 37.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 37.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 37.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 37.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 36.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 36.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 36.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 36.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 36.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 35.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 35.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 35.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 35.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 35.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 35.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 34.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 34.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 34.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 34.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 34.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 33.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 33.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 33.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 33.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 33.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 33.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 32.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 32.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 32.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 32.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 32.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 32.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 32.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 32.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 32.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 32.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 32.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 31.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 31.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 31.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 31.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 31.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 31.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 31.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 30.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 30.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 30.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 30.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 29.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 29.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 29.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 29.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 29.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 29.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 28.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 28.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 28.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 28.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 27.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 27.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 27.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 27.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 27.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 27.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 27.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 26.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 26.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 26.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 26.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 26.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 26.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 26.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 26.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 25.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 25.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 25.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 25.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 24.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 24.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 24.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 24.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 24.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 23.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 23.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 23.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 22.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 22.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 22.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 22.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 22.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 21.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 21.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 21.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 21.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 21.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 21.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 20.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 20.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 20.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 19.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 19.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 19.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 19.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 19.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 18.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 18.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 17.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 17.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 17.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 16.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 16.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 16.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 15.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 15.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 14.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 14.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 14.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 14.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 14.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 14.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 14.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 14.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 13.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 13.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 13.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 13.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 12.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 11.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 11.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 11.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 10.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 10.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 10.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 10.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 9.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 9.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 9.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 8.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 8.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 6.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 5.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 5.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 4.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 45.5
Samples: 246

Max nTPM: 89.1
Min nTPM: 1.5
Std nTPM: 18.1
Median nTPM: 48.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 89.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 86.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 82.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 81.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 76.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 72.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 72.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 71.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 71.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 71.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 71.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 71.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 70.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 70.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 70.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 69.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 69.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 68.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 68.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 68.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 68.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 68.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 67.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 67.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 67.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 66.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 66.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 66.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 66.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 65.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 65.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 65.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 65.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 65.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 64.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 64.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 64.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 63.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 63.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 63.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 63.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 63.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 62.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 62.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 62.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 61.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 61.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 61.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 61.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 61.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 60.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 60.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 60.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 59.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 59.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 59.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 58.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 58.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 58.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 58.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 58.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 57.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 57.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 57.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 57.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 56.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 56.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 56.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 55.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 55.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 55.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 55.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 55.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 54.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 54.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 54.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 54.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 53.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 53.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 53.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 53.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 53.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 53.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 53.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 53.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 52.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 52.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 52.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 52.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 52.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 51.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 51.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 51.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 51.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 51.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 51.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 50.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 50.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 50.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 50.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 50.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 50.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 49.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 49.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 49.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 48.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 48.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 48.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 48.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 48.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 48.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 48.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 47.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 47.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 46.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 46.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 46.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 44.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 44.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 44.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 44.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 44.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 44.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 44.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 43.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 43.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 43.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 43.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 43.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 42.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 42.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 42.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 42.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 42.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 41.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 40.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 40.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 40.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 40.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 39.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 39.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 39.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 39.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 39.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 38.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 38.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 38.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 38.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 37.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 37.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 36.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 36.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 36.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 36.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 35.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 35.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 35.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 34.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 33.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 33.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 32.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 31.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 31.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 30.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 29.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 28.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 28.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 28.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 28.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 28.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 27.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 27.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 26.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 26.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 25.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 24.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 24.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 24.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 24.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 23.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 22.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 22.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 22.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 22.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 21.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 21.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 19.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 19.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 19.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 18.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 18.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 17.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 15.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 15.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 15.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 15.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 15.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 14.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 13.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 12.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 12.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 12.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 11.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 11.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 10.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 10.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 4.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.5
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Brain - Putamen (basal ganglia)
Average nTPM: 28.9
Samples: 205

Max nTPM: 71.0
Min nTPM: 2.7
Std nTPM: 13.1
Median nTPM: 29.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 55.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 53.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 51.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 51.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 49.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 49.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 48.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 48.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 48.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 47.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 47.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 46.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 46.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 46.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 46.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 46.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 46.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 46.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 45.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 45.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 45.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 45.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 44.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 44.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 44.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 42.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 42.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 41.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 41.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 41.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 41.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 41.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 41.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 40.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 40.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 40.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 40.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 40.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 39.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 39.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 39.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 38.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 38.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 38.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 37.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 37.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 37.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 37.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 37.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 37.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 37.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 36.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 36.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 36.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 35.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 35.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 35.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 35.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 35.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 34.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 34.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 34.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 34.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 33.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 33.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 33.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 33.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 33.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 33.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 33.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 32.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 32.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 31.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 31.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 31.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 30.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 30.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 30.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 30.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 29.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 29.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 29.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 29.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 29.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 29.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 29.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 28.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 28.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 28.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 28.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 28.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 28.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 28.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 27.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 27.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 27.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 27.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 27.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 27.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 27.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 26.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 26.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 26.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 26.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 26.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 26.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 24.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 24.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 24.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 23.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 23.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 23.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 23.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 23.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 23.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 23.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 22.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 22.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 22.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 21.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 21.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 20.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 20.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 20.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 20.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 19.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 19.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 19.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 18.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 18.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 18.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 18.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 17.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 17.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 17.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 17.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 17.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 17.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 17.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 16.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 16.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 16.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 16.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 15.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 14.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 13.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 12.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 12.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 11.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 11.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 10.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 10.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 10.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 10.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 10.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 9.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 7.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 4.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

71.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 63.5
FF:10164-103B2 76 years, female 63.5
Nucleus accumbens
Scaled Tags Per Million: 71.3
FF:10037-101F1 23-56 years, mixed 71.3
Putamen
Scaled Tags Per Million: 71.6
FF:10176-103C5 60 years, female 71.6
Globus pallidus
Scaled Tags Per Million: 16.9
FF:10175-103C4 60 years, female 21.9
FF:10161-103A8 76 years, female 12.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.1
Pig sample Sample description nTPM
Caudate
nTPM: 42.1
Samples: 4

Max nTPM: 49.2
Min nTPM: 33.3
Sample A Female 33.3
Sample B Female 46.7
Sample C Male 49.2
Sample D Male 39.1
Putamen
nTPM: 32.0
Samples: 4

Max nTPM: 39.5
Min nTPM: 19.4
Sample A Female 19.4
Sample B Female 35.1
Sample C Male 34.1
Sample D Male 39.5
Septum
nTPM: 37.1
Samples: 4

Max nTPM: 43.5
Min nTPM: 29.8
Sample A Female 43.5
Sample B Female 41.7
Sample C Male 33.4
Sample D Male 29.8
Ventral pallidum
nTPM: 37.7
Samples: 4

Max nTPM: 41.0
Min nTPM: 34.3
Sample A Female 40.0
Sample B Female 35.3
Sample C Male 41.0
Sample D Male 34.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 118.8
Samples: 4

Max nTPM: 135.7
Min nTPM: 108.4
Sample A Male 108.4
Sample B Male 135.7
Sample C Female 108.7
Sample D Female 122.4
Septum
nTPM: 91.5
Samples: 4

Max nTPM: 108.1
Min nTPM: 83.0
Sample A Male 83.0
Sample B Male 108.1
Sample C Female 91.9
Sample D Female 83.0
Ventral forebrain
nTPM: 99.6
Samples: 4

Max nTPM: 114.8
Min nTPM: 82.7
Sample A Male 105.1
Sample B Male 82.7
Sample C Female 114.8
Sample D Female 95.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.7
69838288 Antisense, RP_050301_02_B07, Mouse strain C57BL/6J (56 days, male) 3.2
73769327 Antisense, RP_051121_04_B12, Mouse strain C57BL/6J (56 days, male) 2.2
Pallidum
Expression energy: 0.9
69838288 Antisense, RP_050301_02_B07, Mouse strain C57BL/6J (56 days, male) 1.3
73769327 Antisense, RP_051121_04_B12, Mouse strain C57BL/6J (56 days, male) 0.5

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