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SH3PXD2A
HPA
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  • SH3PXD2A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SH3PXD2A
Synonyms FISH, KIAA0418, SH3MD1
Gene descriptioni

Full gene name according to HGNC.

SH3 and PX domains 2A
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband q24.33
Chromosome location (bp) 103594027 - 103855584
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000107957 (version 109)
Entrez gene 9644
HGNC HGNC:23664
UniProt Q5TCZ1 (UniProt - Evidence at protein level)
neXtProt NX_Q5TCZ1
GeneCards SH3PXD2A
Antibodypedia SH3PXD2A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Adapter protein involved in invadopodia and podosome formation, extracellular matrix degradation and invasiveness of some cancer cells. Binds matrix metalloproteinases (ADAMs), NADPH oxidases (NOXs) and phosphoinositides. Acts as an organizer protein that allows NOX1-or NOX3-dependent reactive oxygen species (ROS) generation and ROS localization. In association with ADAM12, mediates the neurotoxic effect of amyloid-beta peptide.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable superoxide-generating NADPH oxidase activator activity. Involved in osteoclast fusion and superoxide metabolic process. Located in podosome. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SH3PXD2A-202
ENSP00000348215
ENST00000355946
Q5TCZ1
[Direct mapping] SH3 and PX domain-containing protein 2A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002102 [podosome]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006801 [superoxide metabolic process]
GO:0016176 [superoxide-generating NADPH oxidase activator activity]
GO:0035091 [phosphatidylinositol binding]
GO:0042554 [superoxide anion generation]
GO:0042995 [cell projection]
GO:0070161 [anchoring junction]
GO:0072675 [osteoclast fusion]
Show all
1105 aa
121.8 kDa
No 0
SH3PXD2A-203
ENSP00000358789
ENST00000369774
Q5TCZ1
[Direct mapping] SH3 and PX domain-containing protein 2A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001701 [in utero embryonic development]
GO:0002020 [protease binding]
GO:0002102 [podosome]
GO:0005515 [protein binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006801 [superoxide metabolic process]
GO:0010314 [phosphatidylinositol-5-phosphate binding]
GO:0016176 [superoxide-generating NADPH oxidase activator activity]
GO:0032266 [phosphatidylinositol-3-phosphate binding]
GO:0035091 [phosphatidylinositol binding]
GO:0042554 [superoxide anion generation]
GO:0042995 [cell projection]
GO:0043325 [phosphatidylinositol-3,4-bisphosphate binding]
GO:0070161 [anchoring junction]
GO:0070273 [phosphatidylinositol-4-phosphate binding]
GO:0072593 [reactive oxygen species metabolic process]
GO:0072675 [osteoclast fusion]
Show all
1133 aa
125.3 kDa
No 0
SH3PXD2A-205
ENSP00000508599
ENST00000687380
A0A8I5KQW5
[Direct mapping] SH3 and PX domain-containing protein 2A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002102 [podosome]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0035091 [phosphatidylinositol binding]
GO:0042995 [cell projection]
Show all
185 aa
21.5 kDa
No 0

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