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CCNY
HPA
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  • SUMMARY

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  • CCNY
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CCNY
Synonyms C10orf9, CBCP1, CFP1
Gene descriptioni

Full gene name according to HGNC.

Cyclin Y
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband p11.21
Chromosome location (bp) 35247025 - 35572669
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000108100 (version 109)
Entrez gene 219771
HGNC HGNC:23354
UniProt Q8ND76 (UniProt - Evidence at protein level)
neXtProt NX_Q8ND76
GeneCards CCNY
Antibodypedia CCNY antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Positive regulatory subunit of the cyclin-dependent kinases CDK14/PFTK1 and CDK16. Acts as a cell-cycle regulator of Wnt signaling pathway during G2/M phase by recruiting CDK14/PFTK1 to the plasma membrane and promoting phosphorylation of LRP6, leading to the activation of the Wnt signaling pathway. Recruits CDK16 to the plasma membrane. Isoform 3 might play a role in the activation of MYC-mediated transcription.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Cyclin
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, Wnt signaling pathway
Gene summary (Entrez)i

Useful information about the gene from Entrez

Cyclins, such as CCNY, control cell division cycles and regulate cyclin-dependent kinases (e.g., CDC2; MIM 116940) (Li et al., 2009).[supplied by OMIM, May 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CCNY-201
ENSP00000265375
ENST00000265375
Q8ND76
[Direct mapping] Cyclin-Y
Show all
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000079 [regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0000086 [G2/M transition of mitotic cell cycle]
GO:0000307 [cyclin-dependent protein kinase holoenzyme complex]
GO:0000308 [cytoplasmic cyclin-dependent protein kinase holoenzyme complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005886 [plasma membrane]
GO:0007049 [cell cycle]
GO:0007283 [spermatogenesis]
GO:0010508 [positive regulation of autophagy]
GO:0016020 [membrane]
GO:0016055 [Wnt signaling pathway]
GO:0016538 [cyclin-dependent protein serine/threonine kinase regulator activity]
GO:0019901 [protein kinase binding]
GO:0045737 [positive regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0045859 [regulation of protein kinase activity]
GO:0051301 [cell division]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061575 [cyclin-dependent protein serine/threonine kinase activator activity]
Show all
287 aa
33.2 kDa
No 0
CCNY-202
ENSP00000344275
ENST00000339497
Q8ND76
[Direct mapping] Cyclin-Y
Show all
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000079 [regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0000086 [G2/M transition of mitotic cell cycle]
GO:0000307 [cyclin-dependent protein kinase holoenzyme complex]
GO:0000308 [cytoplasmic cyclin-dependent protein kinase holoenzyme complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005886 [plasma membrane]
GO:0007049 [cell cycle]
GO:0007283 [spermatogenesis]
GO:0010508 [positive regulation of autophagy]
GO:0016020 [membrane]
GO:0016055 [Wnt signaling pathway]
GO:0016538 [cyclin-dependent protein serine/threonine kinase regulator activity]
GO:0019901 [protein kinase binding]
GO:0045737 [positive regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0045859 [regulation of protein kinase activity]
GO:0051301 [cell division]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061575 [cyclin-dependent protein serine/threonine kinase activator activity]
Show all
316 aa
36.5 kDa
No 0
CCNY-203
ENSP00000363836
ENST00000374704
Q8ND76
[Direct mapping] Cyclin-Y
Show all
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000079 [regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0000086 [G2/M transition of mitotic cell cycle]
GO:0000307 [cyclin-dependent protein kinase holoenzyme complex]
GO:0000308 [cytoplasmic cyclin-dependent protein kinase holoenzyme complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005886 [plasma membrane]
GO:0007049 [cell cycle]
GO:0007283 [spermatogenesis]
GO:0010508 [positive regulation of autophagy]
GO:0016020 [membrane]
GO:0016055 [Wnt signaling pathway]
GO:0016538 [cyclin-dependent protein serine/threonine kinase regulator activity]
GO:0019901 [protein kinase binding]
GO:0045737 [positive regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0045859 [regulation of protein kinase activity]
GO:0051301 [cell division]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061575 [cyclin-dependent protein serine/threonine kinase activator activity]
Show all
341 aa
39.3 kDa
No 0
CCNY-204
ENSP00000363838
ENST00000374706
Q8ND76
[Direct mapping] Cyclin-Y
Show all
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000079 [regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0000086 [G2/M transition of mitotic cell cycle]
GO:0000307 [cyclin-dependent protein kinase holoenzyme complex]
GO:0000308 [cytoplasmic cyclin-dependent protein kinase holoenzyme complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005886 [plasma membrane]
GO:0007049 [cell cycle]
GO:0007283 [spermatogenesis]
GO:0010508 [positive regulation of autophagy]
GO:0016020 [membrane]
GO:0016055 [Wnt signaling pathway]
GO:0016538 [cyclin-dependent protein serine/threonine kinase regulator activity]
GO:0019901 [protein kinase binding]
GO:0045737 [positive regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0045859 [regulation of protein kinase activity]
GO:0051301 [cell division]
GO:0060828 [regulation of canonical Wnt signaling pathway]
GO:0061575 [cyclin-dependent protein serine/threonine kinase activator activity]
Show all
287 aa
33.2 kDa
No 0
CCNY-207
ENSP00000473487
ENST00000490012
R4GN48
[Direct mapping] Cyclin-Y
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
51 aa
5.9 kDa
No 0
CCNY-209
ENSP00000473625
ENST00000493157
R4GNF3
[Direct mapping] Cyclin-Y
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
101 aa
11.6 kDa
No 0

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