HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:128.8 nTPM
HPA Brain:224.6 nTPM
GTEx:128.8 nTPM
FANTOM5:86.6 Scaled Tags Per Million
Pig:94.5 nTPM
Mouse:163.4 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004059Antibody HPA004186
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 224.6
Sample id Sample description nTPM
Hippocampus
nTPM: 219.3
2621 Female, age 67, right hemisphere 302.7
2529 Female, age 94, left hemisphere 262.6
1911 Female, age 85, right hemisphere 234.5
2148 Female, age 91, left hemisphere 196.0
1855 Male, age 76, left hemisphere 161.3
1898 Male, age 80, left hemisphere 158.5
Dentate gyrus
nTPM: 179.4
2531 Female, age 67, both hemispheres 242.0
1927 Female, age 91, both hemispheres 212.7
2530 Female, age 94, left hemisphere 171.9
2246 Female, age 85, both hemispheres 151.2
2010 Male, age 76, both hemispheres 149.3
2528 Male, age 74, both hemispheres 149.2
Entorhinal gyrus
nTPM: 170.8
2613 Female, age 94, left hemisphere 213.0
2764 Male, age 80, right hemisphere 171.8
1787 Male, age 76, left hemisphere 170.2
1938 Female, age 85, left hemisphere 164.7
2686 Male, age 75, right hemisphere 155.8
2117 Female, age 91, right hemisphere 149.6
Hippocampus, CA1
nTPM: 197.3
2749 Male, age 80, left hemisphere 305.0
2527 Male, age 74, both hemispheres 219.1
2082 Female, age 91, right hemisphere 163.3
1873 Female, age 85, both hemispheres 162.6
2045 Male, age 76, both hemispheres 136.7
Hippocampus, CA2
nTPM: 180.9
1963 Male, age 80, left hemisphere 243.7
2113 Female, age 91, right hemisphere 190.7
2437 Female, age 94, left hemisphere 166.8
1940 Female, age 85, left hemisphere 163.5
1892 Male, age 76, both hemispheres 162.4
2249 Male, age 74, both hemispheres 158.0
Hippocampus, CA3
nTPM: 224.6
2137 Male, age 80, left hemisphere 351.9
2861 Female, age 67, both hemispheres 264.3
2620 Female, age 94, left hemisphere 233.3
1867 Male, age 76, both hemispheres 176.9
2436 Male, age 74, both hemispheres 164.0
1891 Female, age 85, both hemispheres 157.0
Parahippocampal cortex
nTPM: 164.6
2245 Female, age 91, both hemispheres 255.7
2622 Female, age 67, right hemisphere 176.7
2250 Female, age 67, right hemisphere 167.2
1933 Female, age 85, both hemispheres 161.0
2018 Male, age 76, both hemispheres 160.3
2532 Female, age 72, left hemisphere 156.9
2692 Male, age 74, both hemispheres 146.4
1850 Male, age 80, both hemispheres 144.8
1990 Female, age 91, right hemisphere 143.3
2693 Female, age 94, both hemispheres 133.7
Perirhinal gyrus
nTPM: 162.4
2521 Female, age 94, right hemisphere 202.4
1847 Female, age 91, left hemisphere 171.6
1794 Male, age 80, right hemisphere 162.4
1841 Female, age 85, right hemisphere 142.7
2848 Male, age 76, right hemisphere 133.0
Subiculum
nTPM: 163.6
2042 Male, age 76, both hemispheres 201.7
1901 Male, age 80, both hemispheres 198.1
2438 Female, age 94, left hemisphere 153.4
2619 Male, age 74, both hemispheres 150.0
1977 Female, age 85, both hemispheres 146.5
2729 Female, age 91, right hemisphere 132.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 128.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 128.8
Samples: 197

Max nTPM: 714.4
Min nTPM: 28.4
Std nTPM: 80.1
Median nTPM: 109.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 714.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 412.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 390.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 347.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 343.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 337.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 312.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 302.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 277.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 273.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 265.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 86.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.6
FF:10153-102I9 76 years, female 109.8
FF:10169-103B7 60 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 94.5
Pig sample Sample description nTPM
Subiculum
nTPM: 85.9
Samples: 4

Max nTPM: 112.6
Min nTPM: 75.8
Sample A Female 112.6
Sample B Female 75.8
Sample C Male 79.2
Sample D Male 76.1
Dorsal hippocampus
nTPM: 90.3
Samples: 4

Max nTPM: 104.4
Min nTPM: 67.4
Sample A Female 104.4
Sample B Female 88.6
Sample C Male 100.6
Sample D Male 67.4
Entorhinal cortex
nTPM: 94.5
Samples: 4

Max nTPM: 116.2
Min nTPM: 77.2
Sample A Female 99.8
Sample B Female 77.2
Sample C Male 116.2
Sample D Male 84.7
Ventral hippocampus
nTPM: 84.8
Samples: 4

Max nTPM: 137.4
Min nTPM: 54.3
Sample A Female 57.2
Sample B Female 54.3
Sample C Male 90.4
Sample D Male 137.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 163.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.7
Samples: 4

Max nTPM: 163.7
Min nTPM: 143.9
Sample A Male 163.7
Sample B Male 158.1
Sample C Female 143.9
Sample D Female 145.1
Hippocampal formation
nTPM: 163.4
Samples: 4

Max nTPM: 170.4
Min nTPM: 154.2
Sample A Male 158.8
Sample B Male 170.3
Sample C Female 170.4
Sample D Female 154.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
69672880 Antisense, RP_050428_04_F12, Mouse strain C57BL/6J (56 days, male) 9.9

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