We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RUNDC3A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RUNDC3A
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

159.854
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:112.5 nTPM
HPA Brain:132.7 nTPM
GTEx:112.5 nTPM
Pig:111.4 nTPM
Mouse:118.0 nTPM
Allen mouse:5.9 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA023548
Hypothalamus mean intensity 159.854
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 20.584
Periventricular hypothalamic nucleus 33.668
Supraoptic nucleus 28.875
Tuberal nucleus 12.206
Ventral tuberomammillary nucleus 16.764
Lateral preoptic area 93.725
Medial preoptic area 88.007
Suprachiasmatic nucleus 159.854
Paraventricular hypothalamic nucleus 92.889
Anterior hypothalamic area, central 44.772
Ventral medial hypothalamic nucleus 24.930
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 50.499
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 35.138
Dorsal medial hypothalamic nucleus 36.967
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 119.2
2226 Male, age 75, left hemisphere 140.3
1961 Female, age 42, unknown 98.2
Dorsomedial nucleus
nTPM: 106.4
1989 Male, age 62, unknown 153.7
2041 Female, age 72, unknown 84.4
2017 Female, age 42, unknown 81.0
Lateral hypothalamic area
nTPM: 132.7
1791 Male, age 80, right hemisphere 143.6
2271 Male, age 75, both hemispheres 141.3
2228 Male, age 66, unknown 138.8
2412 Male, age 62, unknown 107.2
Mammillary body
nTPM: 91.2
1923 Female, age 72, unknown 116.4
2413 Male, age 66, unknown 104.9
1948 Female, age 72, unknown 83.6
1945 Male, age 80, right hemisphere 78.2
1834 Female, age 42, unknown 72.9
Paraventricular nucleus
nTPM: 73.1
2700 Male, age 62, unknown 73.1
Preoptic area
nTPM: 94.6
1907 Male, age 80, right hemisphere 122.0
1861 Female, age 42, unknown 85.7
2414 Female, age 72, unknown 76.0
Supraoptic nucleus
nTPM: 76.4
2835 Female, age 72, unknown 112.5
2043 Male, age 62, unknown 59.7
1894 Female, age 72, unknown 57.0
Ventromedial nucleus
nTPM: 103.4
1982 Female, age 72, unknown 122.6
1822 Female, age 42, unknown 84.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 112.5
Samples: 202

Max nTPM: 372.8
Min nTPM: 13.7
Std nTPM: 43.4
Median nTPM: 111.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 372.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 255.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 248.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 221.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 215.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 214.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 188.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 179.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 179.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 175.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 164.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 161.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 161.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 160.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 160.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 159.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 157.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 156.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 155.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 154.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 154.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 153.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 153.2
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 153.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 152.0
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 151.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 150.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 150.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 150.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 146.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 146.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 146.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 145.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 144.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 143.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 143.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 142.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 142.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 141.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 141.2
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 141.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 140.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 139.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 139.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 138.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 138.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 138.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 137.8
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 137.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 136.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 136.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 135.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 135.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 135.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 134.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 133.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 133.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 133.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 133.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 132.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 130.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 130.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 129.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 129.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 129.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 128.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 128.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 128.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 128.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 127.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 126.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 126.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 126.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 125.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 123.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 122.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 122.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 122.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 122.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 121.9
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 121.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 121.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 121.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 120.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 120.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 120.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 119.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 119.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 118.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 118.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 117.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 117.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 117.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 116.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 115.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 114.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 113.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 113.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 112.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 112.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 112.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 111.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 110.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 109.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 109.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 109.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 109.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 108.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 108.7
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 108.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 108.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 108.0
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 107.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 107.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 107.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 107.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 106.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 106.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 106.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 106.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 106.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 105.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 105.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 104.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 104.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 102.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 101.8
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 101.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 100.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 100.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 99.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 98.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 97.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 96.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 96.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 96.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 96.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 95.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 95.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 95.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 94.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 94.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 93.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 92.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 92.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 92.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 91.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 88.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 87.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 86.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 85.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 84.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 84.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 84.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 83.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 80.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 80.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 79.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 78.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 78.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 78.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 77.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 76.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 76.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 76.3
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 75.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 74.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 74.0
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 72.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 72.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 72.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 72.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 70.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 69.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 68.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 67.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 67.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 66.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 66.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 64.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 63.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 61.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 61.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 60.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 58.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 57.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 56.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 51.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 50.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 41.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 41.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 40.2
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 37.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 34.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 33.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 30.6
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 30.4
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 23.7
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 23.5
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 19.0
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 13.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 111.4
Samples: 4

Max nTPM: 150.9
Min nTPM: 84.8
Sample A Female 150.9
Sample B Female 102.5
Sample C Male 107.5
Sample D Male 84.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 118.1
Samples: 4

Max nTPM: 127.8
Min nTPM: 111.8
Sample A Male 118.5
Sample B Male 127.8
Sample C Female 111.8
Sample D Female 114.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.9
68745366 Antisense, RP_050210_01_G09, Mouse strain C57BL/6J (56 days, male) 5.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org