We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CSF3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CSF3
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CSF3
Synonyms C17orf33, G-CSF, GCSF, MGC45931
Gene descriptioni

Full gene name according to HGNC.

Colony stimulating factor 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q21.1
Chromosome location (bp) 40015361 - 40017813
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000108342 (version 109)
Entrez gene 1440
HGNC HGNC:2438
UniProt P09919 (UniProt - Evidence at protein level)
neXtProt NX_P09919
GeneCards CSF3
Antibodypedia CSF3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Granulocyte/macrophage colony-stimulating factors are cytokines that act in hematopoiesis by controlling the production, differentiation, and function of 2 related white cell populations of the blood, the granulocytes and the monocytes-macrophages. This CSF induces granulocytes.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Cytokine, Growth factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the IL-6 superfamily of cytokines. The encoded cytokine controls the production, differentiation, and function of granulocytes. Granulocytes are a type of white blood cell that are part of the innate immune response. A modified form of this protein is commonly administered to manage chemotherapy-induced neutropenia. Alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, May 2020]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CSF3-201
ENSP00000225474
ENST00000225474
P09919
[Direct mapping] Granulocyte colony-stimulating factor
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005102 [signaling receptor binding]
GO:0005125 [cytokine activity]
GO:0005130 [granulocyte colony-stimulating factor receptor binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006955 [immune response]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0014068 [positive regulation of phosphatidylinositol 3-kinase signaling]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019899 [enzyme binding]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030851 [granulocyte differentiation]
GO:0032092 [positive regulation of protein binding]
GO:0033138 [positive regulation of peptidyl-serine phosphorylation]
GO:0043202 [lysosomal lumen]
GO:0045639 [positive regulation of myeloid cell differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0071345 [cellular response to cytokine stimulus]
GO:0071682 [endocytic vesicle lumen]
GO:2000251 [positive regulation of actin cytoskeleton reorganization]
Show all
207 aa
22.3 kDa
Yes 0
CSF3-202
ENSP00000327766
ENST00000331769
Q8N4W3
[Direct mapping] Granulocyte colony-stimulating factor
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005102 [signaling receptor binding]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0045639 [positive regulation of myeloid cell differentiation]
Show all
200 aa
21.5 kDa
Yes 0
CSF3-203
ENSP00000377704
ENST00000394148
P09919
[Direct mapping] Granulocyte colony-stimulating factor
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005102 [signaling receptor binding]
GO:0005125 [cytokine activity]
GO:0005130 [granulocyte colony-stimulating factor receptor binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006955 [immune response]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0014068 [positive regulation of phosphatidylinositol 3-kinase signaling]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019899 [enzyme binding]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030851 [granulocyte differentiation]
GO:0032092 [positive regulation of protein binding]
GO:0033138 [positive regulation of peptidyl-serine phosphorylation]
GO:0043202 [lysosomal lumen]
GO:0045639 [positive regulation of myeloid cell differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0071345 [cellular response to cytokine stimulus]
GO:0071682 [endocytic vesicle lumen]
GO:2000251 [positive regulation of actin cytoskeleton reorganization]
Show all
171 aa
18.4 kDa
Yes 0
CSF3-204
ENSP00000377705
ENST00000394149
P09919
[Direct mapping] Granulocyte colony-stimulating factor
Show all
Q6FH65
[Target identity:100%; Query identity:100%] Granulocyte colony-stimulating factor
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005102 [signaling receptor binding]
GO:0005125 [cytokine activity]
GO:0005130 [granulocyte colony-stimulating factor receptor binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0014068 [positive regulation of phosphatidylinositol 3-kinase signaling]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0019899 [enzyme binding]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0030851 [granulocyte differentiation]
GO:0032092 [positive regulation of protein binding]
GO:0033138 [positive regulation of peptidyl-serine phosphorylation]
GO:0043202 [lysosomal lumen]
GO:0045471 [response to ethanol]
GO:0045639 [positive regulation of myeloid cell differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0071222 [cellular response to lipopolysaccharide]
GO:0071345 [cellular response to cytokine stimulus]
GO:0071682 [endocytic vesicle lumen]
GO:1901215 [negative regulation of neuron death]
GO:2000251 [positive regulation of actin cytoskeleton reorganization]
Show all
204 aa
22 kDa
Yes 0
CSF3-206
ENSP00000462991
ENST00000577675
J3KTH8
[Direct mapping] Granulocyte colony-stimulating factor
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005125 [cytokine activity]
GO:0005576 [extracellular region]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0045639 [positive regulation of myeloid cell differentiation]
Show all
164 aa
17.7 kDa
Yes 0
CSF3-209
ENSP00000464421
ENST00000583218
J3QRX2
[Direct mapping] Granulocyte colony-stimulating factor
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005125 [cytokine activity]
GO:0005576 [extracellular region]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0045639 [positive regulation of myeloid cell differentiation]
Show all
155 aa
16.6 kDa
Yes 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org