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RAD51C
HPA
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  • RAD51C
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RAD51C
Synonyms FANCO, RAD51L2
Gene descriptioni

Full gene name according to HGNC.

RAD51 paralog C
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q22
Chromosome location (bp) 58692573 - 58735611
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000108384 (version 109)
Entrez gene 5889
HGNC HGNC:9820
UniProt O43502 (UniProt - Evidence at protein level)
neXtProt NX_O43502
GeneCards RAD51C
Antibodypedia RAD51C antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Essential for the homologous recombination (HR) pathway of DNA repair. Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents. Part of the RAD51 paralog protein complexes BCDX2 and CX3 which act at different stages of the BRCA1-BRCA2-dependent HR pathway. Upon DNA damage, BCDX2 seems to act downstream of BRCA2 recruitment and upstream of RAD51 recruitment; CX3 seems to act downstream of RAD51 recruitment; both complexes bind predominantly to the intersection of the four duplex arms of the Holliday junction (HJ) and to junction of replication forks. The BCDX2 complex was originally reported to bind single-stranded DNA, single-stranded gaps in duplex DNA and specifically to nicks in duplex DNA. The BCDX2 subcomplex RAD51B:RAD51C exhibits single-stranded DNA-dependent ATPase activity suggesting an involvement in early stages of the HR pathway. Involved in RAD51 foci formation in response to DNA damage suggesting an involvement in early stages of HR probably in the invasion step. Has an early function in DNA repair in facilitating phosphorylation of the checkpoint kinase CHEK2 and thereby transduction of the damage signal, leading to cell cycle arrest and HR activation. Participates in branch migration and HJ resolution and thus is important for processing HR intermediates late in the DNA repair process; the function may be linked to the CX3 complex. Part of a PALB2-scaffolded HR complex containing BRCA2 and which is thought to play a role in DNA repair by HR. Protects RAD51 from ubiquitin-mediated degradation that is enhanced following DNA damage. Plays a role in regulating mitochondrial DNA copy number under conditions of oxidative stress in the presence of RAD51 and XRCC3. Contributes to DNA cross-link resistance, sister chromatid cohesion and genomic stability. Involved in maintaining centrosome number in mitosis.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA recombination, DNA repair
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is a member of the RAD51 family. RAD51 family members are highly similar to bacterial RecA and Saccharomyces cerevisiae Rad51 and are known to be involved in the homologous recombination and repair of DNA. This protein can interact with other RAD51 paralogs and is reported to be important for Holliday junction resolution. Mutations in this gene are associated with Fanconi anemia-like syndrome. This gene is one of four localized to a region of chromosome 17q23 where amplification occurs frequently in breast tumors. Overexpression of the four genes during amplification has been observed and suggests a possible role in tumor progression. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RAD51C-201
ENSP00000336701
ENST00000337432
O43502
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000400 [four-way junction DNA binding]
GO:0000707 [meiotic DNA recombinase assembly]
GO:0000722 [telomere maintenance via recombination]
GO:0000724 [double-strand break repair via homologous recombination]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005657 [replication fork]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007062 [sister chromatid cohesion]
GO:0007066 [female meiosis sister chromatid cohesion]
GO:0007131 [reciprocal meiotic recombination]
GO:0007141 [male meiosis I]
GO:0007283 [spermatogenesis]
GO:0008821 [crossover junction endodeoxyribonuclease activity]
GO:0010971 [positive regulation of G2/M transition of mitotic cell cycle]
GO:0030054 [cell junction]
GO:0033063 [Rad51B-Rad51C-Rad51D-XRCC2 complex]
GO:0033065 [Rad51C-XRCC3 complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048476 [Holliday junction resolvase complex]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
376 aa
42.2 kDa
No 0
RAD51C-202
ENSP00000401741
ENST00000413590
H7C1R0
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0006281 [DNA repair]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
257 aa
28.9 kDa
No 0
RAD51C-203
ENSP00000391450
ENST00000421782
O43502
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000400 [four-way junction DNA binding]
GO:0000707 [meiotic DNA recombinase assembly]
GO:0000724 [double-strand break repair via homologous recombination]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005657 [replication fork]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007062 [sister chromatid cohesion]
GO:0007131 [reciprocal meiotic recombination]
GO:0008821 [crossover junction endodeoxyribonuclease activity]
GO:0010971 [positive regulation of G2/M transition of mitotic cell cycle]
GO:0030054 [cell junction]
GO:0033063 [Rad51B-Rad51C-Rad51D-XRCC2 complex]
GO:0033065 [Rad51C-XRCC3 complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048476 [Holliday junction resolvase complex]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
135 aa
14.9 kDa
No 0
RAD51C-204
ENSP00000407282
ENST00000425173
H7C2Q5
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0006281 [DNA repair]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
213 aa
23.3 kDa
No 0
RAD51C-205
ENSP00000464056
ENST00000461271
J3QR58
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0006281 [DNA repair]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
229 aa
25.9 kDa
No 0
RAD51C-215
ENSP00000463121
ENST00000583539
J3QKK3
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0006281 [DNA repair]
GO:0030054 [cell junction]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
346 aa
38.8 kDa
No 0
RAD51C-217
ENSP00000463658
ENST00000584804
J3QLQ2
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0006281 [DNA repair]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
107 aa
12.3 kDa
No 0
RAD51C-218
ENSP00000482326
ENST00000622327
A0A087WZ35
[Direct mapping] DNA repair protein RAD51 homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0006281 [DNA repair]
GO:0090304 [nucleic acid metabolic process]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
131 aa
14.1 kDa
No 0
RAD51C-229
ENSP00000513397
ENST00000697686
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0006281 [DNA repair]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
286 aa
32.1 kDa
No 0
RAD51C-233
ENSP00000513399
ENST00000697690
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0006281 [DNA repair]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
305 aa
33.9 kDa
No 0
RAD51C-237
ENSP00000513402
ENST00000697694
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the breast and female genital organs
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005524 [ATP binding]
GO:0006281 [DNA repair]
GO:0140664 [ATP-dependent DNA damage sensor activity]
Show all
259 aa
29.2 kDa
No 0

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